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The map label for this gene is whiA

Identifier: 148267227

GI number: 148267227

Start: 868114

End: 869058

Strand: Direct

Name: whiA

Synonym: SaurJH9_0792

Alternate gene names: 148267227

Gene position: 868114-869058 (Clockwise)

Preceding gene: 148267226

Following gene: 148267228

Centisome position: 29.87

GC content: 32.91

Gene sequence:

>945_bases
ATGAGCTTTGCATCAGAAATGAAAAATGAATTAACTAGAATAGACGTCGATGAAATGAATGCAAAAGCAGAGCTCAGTGC
GCTGATTCGAATGAATGGTGCACTTAGTCTTTCAAATCAACAATTTGTTATAAATGTTCAAACGGAAAATGCAACAACGG
CAAGACGTATTTATTCGTTGATTAAACGTGTCTTTAATGTGGAAGTTGAAATATTAGTCCGTAAAAAAATGAAGCTTAAA
AAAAATAATATTTATATTTGTCGTACAAAGATGAAAGCGAAAGAAATTCTTGATGAATTAGGAATTTTAAAAGACGGCAT
TTTTACGCATGAAATTGATCATTCAATGATTCAAGATGATGAAATGAGACGCAGTTACTTGAGAGGAGCTTTTCTGGCAG
GTGGCTCAGTGAATAACCCTGAAACATCTTCGTACCATTTGGAAATTTTTTCTCAAAATGAGAGTCATGCAGAAGGCTTA
ACGAAACTAATGAATAGTTATGAGTTGAATGCCAAACATTTAGAGCGAAAAAAAGGAAGTATTACGTATTTAAAAGAAGC
GGAAAAGATTTCGGATTTTCTTAGTTTGATAGGTGGCTATCAAGCGTTATTAAAATTTGAAGACGTACGTATTGTAAGAG
ATATGCGTAATTCTGTTAACCGACTCGTTAATTGTGAAACGGCAAATCTAAATAAAACAGTTAGTGCTGCGATGAAACAA
GTTGAGAGCATTAAATTGATTGATAAAGAAATTGGTATTGAAAATTTACCAGACAGGTTGAGAGAGATTGCTAGAATTCG
AGTAGAACATCAAGAAATTTCGTTGAAAGAGCTTGGAGAAATGGTATCAACTGGTCCAATTTCAAAATCAGGTGTAAATC
ACCGATTAAGAAAACTTAATGATTTAGCCGATAAGATTAGAAATGGTGAACAAATAGAATTATAA

Upstream 100 bases:

>100_bases
AATCATATTATGATATGATAATAGAGCTGTGTAAAAAAATGAAAATAGACAGTGGTTCTAAGGTGAATCATGTTTTAAAT
AAGGAAGGAATGACTGTACG

Downstream 100 bases:

>100_bases
GTAAGAAGGTGTTTTTGGTAGTGAATTATCAAAAATACCTTTTTTATGATTAAAAAGTGTTTAATGAATAATAGTCGACT
AACTATTAAATTGAGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLK
KNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGL
TKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL

Sequences:

>Translated_314_residues
MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLK
KNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGL
TKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL
>Mature_313_residues
SFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKK
NNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLT
KLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQV
ESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_STAA1 (A7WZR7)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001441354.1
- STRING:   A7WZR7
- EnsemblBacteria:   EBSTAT00000003636
- GeneID:   5559206
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_0764
- eggNOG:   COG1481
- GeneTree:   EBGT00050000023971
- HOGENOM:   HBG485718
- OMA:   LERKKGY
- ProtClustDB:   CLSK884885
- BioCyc:   SAUR418127:SAHV_0764-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 35869; Mature: 35738

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSL
CCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCEEECCCEEEEEEECCCCHHHHHHHHH
IKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDD
HHHHHCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHH
EMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGS
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCC
ITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH
DLADKIRNGEQIEL
HHHHHHCCCCCCCC
>Mature Secondary Structure 
SFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSL
CHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCEEECCCEEEEEEECCCCHHHHHHHHH
IKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDD
HHHHHCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHH
EMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGS
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCC
ITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH
DLADKIRNGEQIEL
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA