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The map label for this gene is yhbH [C]

Identifier: 148267212

GI number: 148267212

Start: 847476

End: 848048

Strand: Direct

Name: yhbH [C]

Synonym: SaurJH9_0776

Alternate gene names: 148267212

Gene position: 847476-848048 (Clockwise)

Preceding gene: 148267211

Following gene: 148267213

Centisome position: 29.16

GC content: 32.98

Gene sequence:

>573_bases
ATGATTAGATTTGAAATTCATGGAGATAACCTCACTATCACAGATGCTATTCGCAACTATATTGAGGAAAAAATTGGTAA
GTTGGAACGTTATTTTAATGACGTACCAAATGCAGTGGCGCATGTTAAAGTTAAAACTTATTCAAATTCAGCTACTAAAA
TTGAAGTAACAATTCCATTGAAAAATGTTACGTTAAGAGCTGAAGAGCGAAACGATGATTTATACGCAGGTATTGATTTA
ATTAATAATAAACTTGAAAGACAAGTTCGAAAATATAAAACACGTATTAATCGTAAGAGCCGTGATCGAGGAGATCAAGA
AGTGTTTGTTGCCGAATTACAAGAAATGCAAGAAACACAAGTTGATAATGACGCTTACGATGATAACGAGATAGAAATTA
TTCGTTCAAAAGAATTCAGCTTAAAACCAATGGATTCAGAAGAAGCGGTATTACAAATGAATCTATTAGGTCATGACTTC
TTTGTATTCACAGACAGAGAAACTGATGGAACAAGTATCGTTTACCGACGTAAAGACGGTAAATATGGCTTGATTCAAAC
TAGTGAACAATAA

Upstream 100 bases:

>100_bases
AAATATCAGAAAATTCAAAGTGTTTGCGTTTGCACGATAGCGTAAAAATGTTAAAATATAATAAAGAGTTACCAATAAAG
AGGTTTAAGGAGAGATTACT

Downstream 100 bases:

>100_bases
ATTAAGTTTAAAGCACTTGTGTTTTTGCACAAGTGCTTTTTTATACTCCAAAAGCAAATTATGACTATTTCATAGTTCGA
TAATGTAATTTGTTGAATGA

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDL
INNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDF
FVFTDRETDGTSIVYRRKDGKYGLIQTSEQ

Sequences:

>Translated_190_residues
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDL
INNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDF
FVFTDRETDGTSIVYRRKDGKYGLIQTSEQ
>Mature_190_residues
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDL
INNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDF
FVFTDRETDGTSIVYRRKDGKYGLIQTSEQ

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y704_STAAB (Q2YSH7)

Other databases:

- EMBL:   AJ938182
- RefSeq:   YP_416197.1
- ProteinModelPortal:   Q2YSH7
- SMR:   Q2YSH7
- STRING:   Q2YSH7
- EnsemblBacteria:   EBSTAT00000012534
- GeneID:   3793913
- GenomeReviews:   AJ938182_GR
- KEGG:   sab:SAB0704
- eggNOG:   COG1544
- GeneTree:   EBGT00050000025308
- HOGENOM:   HBG675832
- OMA:   NVVYKRK
- PhylomeDB:   Q2YSH7
- ProtClustDB:   CLSK884877
- BioCyc:   SAUR273036:SAB0704-MONOMER
- GO:   GO:0005488
- InterPro:   IPR003489
- Gene3D:   G3DSA:3.30.160.100
- TIGRFAMs:   TIGR00741

Pfam domain/function: PF02482 Ribosomal_S30AE; SSF69754 Ribosomal_S30Ae/sigma54_mod

EC number: NA

Molecular weight: Translated: 22213; Mature: 22213

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPL
CEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEE
KNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQ
CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
VDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDG
CCCCCCCCCCEEEEECCCCCCCCCCCCHHEEEEEECCCEEEEEECCCCCCCEEEEEECCC
KYGLIQTSEQ
CEEEEEECCC
>Mature Secondary Structure
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPL
CEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEE
KNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQ
CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
VDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDG
CCCCCCCCCCEEEEECCCCCCCCCCCCHHEEEEEECCCEEEEEECCCCCCCEEEEEECCC
KYGLIQTSEQ
CEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA