| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is 148266883
Identifier: 148266883
GI number: 148266883
Start: 476363
End: 477043
Strand: Direct
Name: 148266883
Synonym: SaurJH9_0445
Alternate gene names: NA
Gene position: 476363-477043 (Clockwise)
Preceding gene: 148266876
Following gene: 148266884
Centisome position: 16.39
GC content: 30.84
Gene sequence:
>681_bases ATGAAATTTAAAGCGATAGCAAAAGCAAGTTTAGCATTGGGAATGTTAGCAACAGGTGTAATTACATCGAATGTACAATC AGTACAAGCGAAAACAGAAGTTAAACAACAAAGTGAATCAGAGTTGAAACACTATTATAATAAACCGGTTTTAGAGCGTA AAAATGTTACTGGATATAAATATACTGAAAAAGGTAAAGATTATATAGATGTTATAGTAGACAATCAATATTCTCAAATT TCTTTAGTTGGATCTGATAAAGACAAATTTAAAGATGGAGACAACTCGAATATAGATGTGTTTATCCTTAGAGAAGGTGA CAGTAGACAAGCAACAAATTACTCAATTGGTGGCGTAACAAAAACAAACAGTCAACCTTTTATTGACTATATACACACAC CAATCCTTGAAATCAAGAAAGGTAAAGAAGAACCACAAAGTAGTTTATACCAAATTTATAAAGAAGACATCTCATTGAAA GAACTTGATTATAGATTAAGAGAACGTGCAATCAAACAACACGGCTTGTATTCAAATGGTCTTAAACAAGGTCAAATTAC AATTACAATGAAAGATGGCAAATCACATACTATCGATTTAAGTCAAAAACTTGAAAAAGAACGTATGGGTGATTCTATCG ACGGCAGACAAATACAAAAAATTCTAGTAGAAATGAAATAA
Upstream 100 bases:
>100_bases GGTTTAATTTGAAAGGGGATAGCGCCTCAATATAATGTAGGTAGATTGTTCATATTACGTAATTGAAAAATCAAATTTAA ATAGATTGGGGCTAAAAATT
Downstream 100 bases:
>100_bases TACTTTCTAACAACAAAGCGCTATGTTGAATAGTGCTTGTTATGGAAATATATGGAAGTTAAGCGACGTACTGTTGCTTA GCTTCTTTTTTTGAGGGGAA
Product: superantigen-like protein
Products: NA
Alternate protein names: Exotoxin; Superantigen-Like; Exotoxin-Like Protein
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQYSQI SLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK ELDYRLRERAIKQHGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK
Sequences:
>Translated_226_residues MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQYSQI SLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK ELDYRLRERAIKQHGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK >Mature_226_residues MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQYSQI SLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK ELDYRLRERAIKQHGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25691; Mature: 25691
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE YTEKGKDYIDVIVDNQYSQISLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVT ECCCCCCEEEEEECCCCCEEEEEECCHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCEE KTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLKELDYRLRERAIKQHGLYSNG ECCCCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC LKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK CCCCEEEEEEECCCCCEECHHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE YTEKGKDYIDVIVDNQYSQISLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVT ECCCCCCEEEEEECCCCCEEEEEECCHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCEE KTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLKELDYRLRERAIKQHGLYSNG ECCCCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC LKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEMK CCCCEEEEEEECCCCCEECHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA