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The map label for this gene is ywcJ [H]

Identifier: 148266728

GI number: 148266728

Start: 341149

End: 341994

Strand: Reverse

Name: ywcJ [H]

Synonym: SaurJH9_0288

Alternate gene names: 148266728

Gene position: 341994-341149 (Counterclockwise)

Preceding gene: 148266729

Following gene: 148266705

Centisome position: 11.77

GC content: 33.33

Gene sequence:

>846_bases
ATGAAAAGCGAGGATGTCATTGTGAAGGAGAAACATATTAAATGGGATAAGATTTTTTATGGGGATGACTGGGTAAATAA
CGTAGTCGAAACAATAAGAACAAAAGATATATTACAAAGCGTTTATTTAAAACGTTATTTATTACGCGCGATGATGGCAG
GATTTATTATCGGTATTATTACGGTCTTCGTGCTATCAGTTAAAGCAACACACGAACCAGATTTACCACCAGGTATAGTG
AATATGGCTAGCGCCATTACATTCAGCTTTGCGTTAGTACTCATTTTATTTACAAACTCCGAACTACTAACCAGTAACTT
CATGTACTTTACTGTAGGCCTGTATTATAAAGTAATTAAACCGACTAGAGTATTGAAAATATTTTTATTATGCTTTGCAG
GAAATATTTTAGGTGCTGCTATTTTATTTAGTTTCATGCGTTTTTCAAATGTAATGACGCCAGATATGTTAAATCAGTTA
TCAGCAGTTATTGAGCACAAAACGTTGTCTACTGGTTTTGTAAGTATATTAATGAAAGCGATCTTCGCCAATTTCTTTAT
CAATATTTCATTAGTTATTGCCATGCAAATTGACGATGTACTCGCAAAAATGTTTGTCATGATGTTCGGTGTTACCATAT
TCGCCTTTATGGGTTATGAACACGTCGTTTACAACAGTTGCTTATTTATGGGTGGTTTAATTTATCAAGTTGATACATTG
CACTTCATACCAGCTATTTCGAATATCGCTGCGGCTTTTATCGGTAACTATATTGGAGGCGGACTCATTATAGGTTTATT
CTATGCTTACTTGAATGATCATCATCAATTTTATAAAAATAATTAA

Upstream 100 bases:

>100_bases
CCAAAAAATCCTATCAGTTATTCAAAAATATTAGTTTTTAAAATTAATTTTGTGAAATTATTCACAAATAAGACGATTCA
TAGTATACTCTGATTAACAA

Downstream 100 bases:

>100_bases
CTATATTTGAACAATGCGTTAGTCGATGCCTTAAATATTTAGAAGTGCATTGTCTAACGTATTTTTTTTAAGTTCGTCAA
TGGTTTTTGTCCGATGCTAT

Product: formate/nitrite transporter

Products: formate [Periplasm]; formate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKSEDVIVKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMMAGFIIGIITVFVLSVKATHEPDLPPGIV
NMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIKPTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQL
SAVIEHKTLSTGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN

Sequences:

>Translated_281_residues
MKSEDVIVKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMMAGFIIGIITVFVLSVKATHEPDLPPGIV
NMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIKPTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQL
SAVIEHKTLSTGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN
>Mature_281_residues
MKSEDVIVKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMMAGFIIGIITVFVLSVKATHEPDLPPGIV
NMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIKPTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQL
SAVIEHKTLSTGFVSILMKAIFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN

Specific function: Involved In The Bidirectional Transport Of Formate. [C]

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]

Homologues:

Organism=Escherichia coli, GI1787132, Length=268, Percent_Identity=27.9850746268657, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 31790; Mature: 31790

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSEDVIVKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMMAGFIIGII
CCCCCCEEHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHKTLSTGFVSILMKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
HHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate [Cytoplasm]; formate [Periplasm] [C]

Specific reaction: formate [Cytoplasm] = formate [Periplasm] formate [Periplasm] = formate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2163394; 7934828; 9384377 [H]