| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is gsiB [H]
Identifier: 148266661
GI number: 148266661
Start: 271010
End: 272422
Strand: Reverse
Name: gsiB [H]
Synonym: SaurJH9_0221
Alternate gene names: 148266661
Gene position: 272422-271010 (Counterclockwise)
Preceding gene: 148266662
Following gene: 148266659
Centisome position: 9.37
GC content: 31.07
Gene sequence:
>1413_bases ATGCATTCATCTGGCAAAGACTTAAATATTTCGTTACCGTTAAAAACAAAGTCTATTGCACCTTATGAAACAGATGTACC AGTTAAGATTGGTGCTGCAGAATCATTATTTAAAACAAATGATCAAGGAAAAATAGAAAAAGCATTAGTGAAATCGTATC ATCAACCAAATGATACAACGTTAGATATAGAATTAAAAGATAATATTAAATTTCAAAACGGTCAAAAATTGACTGCAGAA AAAGTGAAATCTAGCCTTGAAAATAGCATGAAAAAAAGCGACTTGGTCAAATATTCATTACCAATATCATCAATTACCGC TAAAGGTCAAAAACTGACAATTAAAACCAACTCCGCTTACCCTGAACTTGTATCTGAATTAGCTAATCCTTTTATGGCAA TTTATTATACAGATGCTAAATCAGATGTTAATCAAACTCCTGTTGGTACAGGCCCTTACCAAATAAAAGATTATAAGCAA TCTCGAAAAATATCATTGTCGAATTTTAAGGACTATTGGCAAGGTAAACCGAAACTTGATCATATTACTGTGACGTACCA AGAAGACGGCAATAATCGCGTCAGAAATTTAGAATCTCAAAAAGATGATTTAATAACTGATGTCCCAGTTAATAAAGTTC ATGACATAGAAAATAATCAAAATTTAAAAGTGTCAAAAGAATCTGGATTTAGAACTTCTTTACTTATGTATAATCATACT AATAAAAAAATGACTAAATCCGTTCGTGAAGCATTAGATCATATCATTGATAGACAAGGTATTGCAGATCATATTTATCA AGGTTATGCGAAACCTGCAACGAGTCCATTTAATGATAAAATTCCATATATTAAAGAACCTAAGTTAACCAAACAAAATA TCGAACAAGCAAAAACGTTATTAGCTAAAGATGGTTATACAAAAGAACACCCTTTAAAAATTAAGTTAATTACGTATGAC GGTCGTCCAGAGCTATCGAAAATTGCGCAAGTATTACAATCAGATGCTAAAAAAGCAAATATTGAAATCGACATTAAAAG TGTTGATGACATAGAAGGTTACTTAAAAGACCGTTCTGCATGGGATGCAACGATGTATAGTTTCGGAACAATCCCTCGCG GTGATACAGGTTATTTCTTTAATCAAGCATATAAAAAAGATGGTGCTATTAATAAAGGAGACTACAATAATAGCAACGTC GATGATTTAATTAATCAATTGAATCATACTGTAGATGTTAAGGAACGTCACAATATTTCTAATGATATTATTAAATTATC AAGTCGAGATGTACCAAACAGTTATATTGCTTACAACGATCAAATAGTCGCTGCTAACTCTAAGGTTAAAAATTATAAAG TAACACCTGAAGGTATCTATTTAATCGATTATCGAACAACGATTGAACGATAA
Upstream 100 bases:
>100_bases GGTTTTACATAGTAATTAGAAAGAGAGTGTTAATGAAATGAAGTTTAAAAGACTAGCAACTATATTTTCAGCAGTATTAG TGTTATCAGGATGTGGCTCA
Downstream 100 bases:
>100_bases GGGAGTGTGGGACATTGATTTATGTCTCAGCCCTGCTTCAACTATAAAAACCACGCCGAAGTCATCCAATATGATTATGG CGTGGTTTAATTTGCTTATA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKLTAE KVKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAYPELVSELANPFMAIYYTDAKSDVNQTPVGTGPYQIKDYKQ SRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVHDIENNQNLKVSKESGFRTSLLMYNHT NKKMTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKTLLAKDGYTKEHPLKIKLITYD GRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNNSNV DDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER
Sequences:
>Translated_470_residues MHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKLTAE KVKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAYPELVSELANPFMAIYYTDAKSDVNQTPVGTGPYQIKDYKQ SRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVHDIENNQNLKVSKESGFRTSLLMYNHT NKKMTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKTLLAKDGYTKEHPLKIKLITYD GRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNNSNV DDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER >Mature_470_residues MHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTTLDIELKDNIKFQNGQKLTAE KVKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAYPELVSELANPFMAIYYTDAKSDVNQTPVGTGPYQIKDYKQ SRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVHDIENNQNLKVSKESGFRTSLLMYNHT NKKMTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKTLLAKDGYTKEHPLKIKLITYD GRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNNSNV DDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=488, Percent_Identity=25.6147540983607, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1789887, Length=463, Percent_Identity=23.3261339092873, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1787762, Length=440, Percent_Identity=21.8181818181818, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789966, Length=361, Percent_Identity=22.4376731301939, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787551, Length=204, Percent_Identity=25.9803921568627, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 53248; Mature: 53248
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTT CCCCCCCEEEEECCCCCCCCCCCCCCCEEECCHHHHHHCCCCCHHHHHHHHHCCCCCCCE LDIELKDNIKFQNGQKLTAEKVKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAY EEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCEEEEEECCCC PELVSELANPFMAIYYTDAKSDVNQTPVGTGPYQIKDYKQSRKISLSNFKDYWQGKPKLD HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHCCCCCCE HITVTYQEDGNNRVRNLESQKDDLITDVPVNKVHDIENNQNLKVSKESGFRTSLLMYNHT EEEEEEEECCCCHHHCCCCHHCCCEECCCCCHHCCCCCCCCEEEECCCCCEEEEEEEECC NKKMTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKTL CHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LAKDGYTKEHPLKIKLITYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSA HHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHCEEEEEECCCHHHHHHHHCCCH WDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNNSNVDDLINQLNHTVDVKERHNIS HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEECCHHHCCCC NDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER HHEEEECCCCCCCCEEEECCEEEEECCCCCEEEECCCCEEEEEEHHCCCC >Mature Secondary Structure MHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSYHQPNDTT CCCCCCCEEEEECCCCCCCCCCCCCCCEEECCHHHHHHCCCCCHHHHHHHHHCCCCCCCE LDIELKDNIKFQNGQKLTAEKVKSSLENSMKKSDLVKYSLPISSITAKGQKLTIKTNSAY EEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCEEEEEECCCC PELVSELANPFMAIYYTDAKSDVNQTPVGTGPYQIKDYKQSRKISLSNFKDYWQGKPKLD HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHCCCCCCE HITVTYQEDGNNRVRNLESQKDDLITDVPVNKVHDIENNQNLKVSKESGFRTSLLMYNHT EEEEEEEECCCCHHHCCCCHHCCCEECCCCCHHCCCCCCCCEEEECCCCCEEEEEEEECC NKKMTKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKTL CHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LAKDGYTKEHPLKIKLITYDGRPELSKIAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSA HHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHCEEEEEECCCHHHHHHHHCCCH WDATMYSFGTIPRGDTGYFFNQAYKKDGAINKGDYNNSNVDDLINQLNHTVDVKERHNIS HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEECCHHHCCCC NDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER HHEEEECCCCCCCCEEEECCEEEEECCCCCEEEECCCCEEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA