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The map label for this gene is cap5A

Identifier: 148266575

GI number: 148266575

Start: 161252

End: 161920

Strand: Direct

Name: cap5A

Synonym: SaurJH9_0135

Alternate gene names: 148266575

Gene position: 161252-161920 (Clockwise)

Preceding gene: 148266574

Following gene: 148266576

Centisome position: 5.55

GC content: 29.9

Gene sequence:

>669_bases
ATGGAAAGTACATTAGAATTAACAAAAATTAAAGAAGTATTACAAAAAAACTTGAAGATTTTAATTATTTTACCGCTATT
ATTTTTAATTATTAGCGCTATTGTTACATTTTTCGTCTTATCACCTAAATATCAAGCTAATACTCAAATCTTAGTGAATC
AAACTAAGGGTGACAATCCTCAGTTTATGGCACAAGAGGTTCAAAGTAATATTCAACTTGTAAATACGTATAAAGAAATT
GTTAAAAGTCCTAGAATTTTAGATGAGGTGTCAAAGGACTTAAATGATAAGTATTCACCATCTAAATTGTCGAGTATGTT
GACAATTACAAACCAAGAAAATACGCAACTTATCAACATCCAAGTTAAAAGTGGTCATAAACAAGATTCGGAAAAAATTG
CGAATAGCTTCGCTAAAGTTACAAGTAAACAAATTCCGAAGATTATGAGTGTGGATAACGTATCAATTTTATCTAAAGCA
GACGGTACAGCAGTTAAAGTCGCACCAAAAACTGTAGTGAATCTAATCGGTGCATTCTTTTTAGGATTAGTTGTCGCGCT
TATATATATCTTCTTCAAAGTAATTTTCGATAAGCGAATTAAAGATGAAGAAGATGTAGAGAAAGAATTAGGATTGCCTG
TATTGGGTTCAATTCAAAAATTTAATTAA

Upstream 100 bases:

>100_bases
AATGCGGTTTAAAAGTAATTAATTGTTTAAACGATATGTAATATGTAAATACTATATATATAATACCAATTTTAATGAAA
ATTTTTAAGGGAGGTAAATA

Downstream 100 bases:

>100_bases
GGATGGTTGCTACTTATGTCAAAAAAGGAAAATACGACAACAACACTATTTGTATATGAAAAACCAAAATCAACAATTAG
TGAAAAGTTTCGAGGTATAC

Product: MPA1 family polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEI
VKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
DGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN

Sequences:

>Translated_222_residues
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEI
VKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
DGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN
>Mature_222_residues
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEI
VKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
DGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN

Specific function: Required for the biosynthesis of type 5 capsular polysaccharide (Cap5/CP5). Might act as the chain-length regulator

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CAP5A_STAAE (P95695)

Other databases:

- EMBL:   U81973
- EMBL:   AP009351
- PIR:   A89776
- RefSeq:   YP_001331130.1
- ProteinModelPortal:   P95695
- SMR:   P95695
- STRING:   P95695
- EnsemblBacteria:   EBSTAT00000033061
- GeneID:   5331717
- GenomeReviews:   AP009351_GR
- KEGG:   sae:NWMN_0095
- eggNOG:   COG3944
- GeneTree:   EBGT00050000024205
- HOGENOM:   HBG697325
- OMA:   YQSSTQI
- ProtClustDB:   CLSK884432
- BioCyc:   SAUR426430:NWMN_0095-MONOMER
- GO:   GO:0009405
- InterPro:   IPR003856
- InterPro:   IPR005701
- TIGRFAMs:   TIGR01006

Pfam domain/function: PF02706 Wzz

EC number: NA

Molecular weight: Translated: 24855; Mature: 24855

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc13971c)-; HASH(0xc7c8ee0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNP
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
QFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCEEEEE
QVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFF
EECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCCCCCCEEEECHHHHHHHHHHHH
LGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCCCCCH
>Mature Secondary Structure
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNP
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
QFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCEEEEE
QVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFF
EECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCCCCCCEEEECHHHHHHHHHHHH
LGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9245821