Click here to switch to the map view.

The map label for this gene is 148266573

Identifier: 148266573

GI number: 148266573

Start: 156740

End: 157915

Strand: Direct

Name: 148266573

Synonym: SaurJH9_0133

Alternate gene names: NA

Gene position: 156740-157915 (Clockwise)

Preceding gene: 148266572

Following gene: 148266574

Centisome position: 5.39

GC content: 28.74

Gene sequence:

>1176_bases
ATGTTTATTGGCAAGAATTTAGAATACGTGAGAAAGCTTAATGCTCTAAGTAGAAAAGAATTATCAGAAAAAATAAATGT
GAGTGAACAAGCAATTTGGCAATATGAAACAAAAAATATGATGCCAGAAATTAGTAAAATTTATGATATGACATCTATTT
TTAATGTTAAATCTAGCTACTTTATTAGCGAGCAGCCCGAAGAGCTCCTAATAAATTCTGTCGATAAACATAGTATAGCT
TTTAGAGCAAAAAATTATAAAGTATCTACGAAACTATTAAATAAGCAATATTATCAAGCAATGTATTTATCTAATTTAAC
TAGCTACTTATTTTCTTTTGTAACGATACCGGATAATATTATTTTATCTTTAATAAATAATTTAGATGAATTGTTGAATG
GCAATTTAGAATCACTAAATAAAAAAGAAAGCATAAAAGAAATTGCTAAAGTTGTGAGGGCTAAAATTCTTCAAGATGAA
AGCAACGAAGCACTATTATTTATGCTTGAAAAAGCGGGTATAGTTATATACGAAAAGCGAATTAATGATAGCATAGACGC
ATATAGTTTTTGGAGTAAAGATCAGACACCTTTTATTATACTGGGTACAAATAGGGGGGTAGCAGTTAGAAGGAATTTTG
ATCTTGCACATGAGCTGGGACATCTCGTTCTACATCGTCATATTCAATTCGACTTATTATCTCCTGAAGAATATAAGACA
ATTGAACATGAGGCAGATATTTTCGCCTCTGAATTTTTACTACCTGAAGAAGCGTTTAAAAAAGACTTTGATCAAATGAC
CAAAAAATCAAATCCTGATTATTTAGCTGTATTGAAAGAAAAATGGTATGTTTCTATACAAGCAATTGCAATGAGAGCTT
ATTATCTAGGCCTAATGTCTAGTACTCAGTACAGATATTTTTGGGCATCATTAAATAAAAAAGGCTATAAAAGTAAAGAG
CCTTTAGACGACGTGATTGAAATGTCACGTCCTGTCAAAATGAATAGTTTATTAAAGTTGTATTTTGATAGAAATATACT
GACACCACAAAAATTATTGAATTATTTAAAAGTCGATGAAACATTTTTGAATCATCTAGCAGGTATTAATTTAAAACTCT
TTAAGGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAA

Upstream 100 bases:

>100_bases
TTAAAAACGATGGAGAGTTAGAACTCATAGATGTGGAACATGCATTTGGTATCAGTATCGATGAAGGTAACGATATGATT
GAAAGTGAAAGGTGAAGTTA

Downstream 100 bases:

>100_bases
GGCACCAATATTTAAAACTCGAGCTGAAAAGATCATCATTTCAGTTCGAGTTTTTTTGTGTAACATCTGTTGATAGGTAG
CGACAAGGACCTTTTAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Zn Peptidase; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator HTH_3 Family; Conserved Domain Protein; Transcription Regulator; DNA-Bining Transcriptional Regulator; XRE Family Transcriptional Regulator; Phage-Like Protein; Regulatory Protein

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEISKIYDMTSIFNVKSSYFISEQPEELLINSVDKHSIA
FRAKNYKVSTKLLNKQYYQAMYLSNLTSYLFSFVTIPDNIILSLINNLDELLNGNLESLNKKESIKEIAKVVRAKILQDE
SNEALLFMLEKAGIVIYEKRINDSIDAYSFWSKDQTPFIILGTNRGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMSSTQYRYFWASLNKKGYKSKE
PLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDETFLNHLAGINLKLFKDYVNENREYNITNLYK

Sequences:

>Translated_391_residues
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEISKIYDMTSIFNVKSSYFISEQPEELLINSVDKHSIA
FRAKNYKVSTKLLNKQYYQAMYLSNLTSYLFSFVTIPDNIILSLINNLDELLNGNLESLNKKESIKEIAKVVRAKILQDE
SNEALLFMLEKAGIVIYEKRINDSIDAYSFWSKDQTPFIILGTNRGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMSSTQYRYFWASLNKKGYKSKE
PLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDETFLNHLAGINLKLFKDYVNENREYNITNLYK
>Mature_391_residues
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEISKIYDMTSIFNVKSSYFISEQPEELLINSVDKHSIA
FRAKNYKVSTKLLNKQYYQAMYLSNLTSYLFSFVTIPDNIILSLINNLDELLNGNLESLNKKESIKEIAKVVRAKILQDE
SNEALLFMLEKAGIVIYEKRINDSIDAYSFWSKDQTPFIILGTNRGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMSSTQYRYFWASLNKKGYKSKE
PLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDETFLNHLAGINLKLFKDYVNENREYNITNLYK

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45914; Mature: 45914

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEISKIYDMTSIFNVKSSY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC
FISEQPEELLINSVDKHSIAFRAKNYKVSTKLLNKQYYQAMYLSNLTSYLFSFVTIPDNI
EECCCCHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ILSLINNLDELLNGNLESLNKKESIKEIAKVVRAKILQDESNEALLFMLEKAGIVIYEKR
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECC
INDSIDAYSFWSKDQTPFIILGTNRGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
CCCCCCHHCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHEEEECCCHHHHH
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC
STQYRYFWASLNKKGYKSKEPLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDE
CCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
TFLNHLAGINLKLFKDYVNENREYNITNLYK
HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEISKIYDMTSIFNVKSSY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC
FISEQPEELLINSVDKHSIAFRAKNYKVSTKLLNKQYYQAMYLSNLTSYLFSFVTIPDNI
EECCCCHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ILSLINNLDELLNGNLESLNKKESIKEIAKVVRAKILQDESNEALLFMLEKAGIVIYEKR
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECC
INDSIDAYSFWSKDQTPFIILGTNRGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
CCCCCCHHCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHEEEECCCHHHHH
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC
STQYRYFWASLNKKGYKSKEPLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDE
CCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
TFLNHLAGINLKLFKDYVNENREYNITNLYK
HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA