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The map label for this gene is spa [H]

Identifier: 148266538

GI number: 148266538

Start: 116318

End: 117880

Strand: Reverse

Name: spa [H]

Synonym: SaurJH9_0098

Alternate gene names: 148266538

Gene position: 117880-116318 (Counterclockwise)

Preceding gene: 148266539

Following gene: 148266534

Centisome position: 4.06

GC content: 38.2

Gene sequence:

>1563_bases
ATGATGACTTTACAAATACATACAGGGGGTATTAATTTGAAAAAGAAAAACATTTATTCAATTCGTAAACTAGGTGTAGG
TATTGCATCTGTAACTTTAGGTACATTACTTATATCTGGTGGCGTAACACCTGCTGCAAATGCTGCGCAACACGATGAAG
CTCAACAAAATGCTTTTTATCAAGTGTTAAATATGCCTAACTTAAACGCTGATCAACGTAATGGTTTTATCCAAAGCCTT
AAAGATGATCCAAGCCAAAGTGCTAACGTTTTAGGTGAAGCTCAAAAACTTAATGACTCTCAAGCTCCAAAAGCTGATGC
GCAACAAAATAACTTCAACAAAGATCAACAAAGCGCCTTCTATGAAATCTTGAACATGCCTAACTTAAACGAAGCGCAAC
GTAACGGCTTCATTCAAAGTCTTAAAGACGACCCAAGCCAAAGCACTAATGTTTTAGGTGAAGCTAAAAAATTAAACGAA
TCTCAAGCACCGAAAGCTGATAACAATTTCAACAAAGAACAACAAAATGCTTTCTATGAAATCTTGAATATGCCTAACTT
AAACGAAGAACAACGCAATGGTTTCATCCAAAGCTTAAAAGATGACCCAAGCCAAAGTGCTAACCTATTGTCAGAAGCTA
AAAAGTTAAATGAATCTCAAGCACCGAAAGCGGATAACAAATTCAACAAAGAACAACAAAATGCTTTCTATGAAATCTTA
CATTTACCTAACTTAAACGAAGAACAACGCAATGGTTTCATCCAAAGCTTAAAAGATGACCCAAGCCAAAGCGCTAACCT
TTTAGCAGAAGCTAAAAAGCTAAATGATGCACAAGCACCAAAAGCTGACAACAAATTCAACAAAGAACAACAAAATGCTT
TCTATGAAATTTTACATTTACCTAACTTAACTGAAGAACAACGTAACGGCTTCATCCAAAGCCTTAAAGACGATCCTTCA
GTGAGCAAAGAAATTTTAGCAGAAGCTAAAAAGCTAAACGATGCTCAAGCACCAAAAGAGGAAGACAACAAAAAACCTGG
TAAAGAAGACGGCAACAAACCTGGCAAAGAAGACGGCAACAAGCCTGGTAAAGAAGACAACAAAAAACCTGGTAAAGAAG
ACGGCAACAAGCCTGGTAAAGAAGACAACAACAAACCTGGCAAAGAAGACGGCAACAAGCCTGGTAAAGAAGACAACAAC
AAGCCTGGTAAAGAAGACGGCAACAAGCCTGGTAAAGAAGACGGCAACAAACCTGGTAAAGAAGACGGCAACGGAGTACA
TGTCGTTAAACCTGGTGATACAGTAAATGACATTGCAAAAGCAAACGGCACTACTGCTGACAAAATTGCTGCAGATAACA
AATTAGCTGATAAAAACATGATCAAACCTGGTCAAGAACTTGTTGTTGATAAGAAGCAACCAGCAAACCATGCAGATGCT
AACAAAGCTCAAGCATTACCAGAAACTGGTGAAGAAAATCCATTCATCGGTACAACTGTATTTGGTGGATTATCATTAGC
CTTAGGTGCAGCGTTATTAGCTGGACGTCGTCGCGAACTATAA

Upstream 100 bases:

>100_bases
AATCTTTCAGCAAAATATTTATTTTATAAGTTGTAAAACTTACATTTAAATTTAATTATAAATATAGATTTTAGTATTGC
AATACATAATTCGTTATATT

Downstream 100 bases:

>100_bases
AAACAAACAATACACAACGATAGATATCATTTTATCCAAACCAATTTTAACTTATATACGTTGATTAACACATTCTTATT
TGAAATGATAAGAATCATCT

Product: cell wall anchor domain-containing protein

Products: NA

Alternate protein names: IgG-binding protein A; Staphylococcal protein A [H]

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MMTLQIHTGGINLKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQNAFYQVLNMPNLNADQRNGFIQSL
KDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNKDQQSAFYEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNE
SQAPKADNNFNKEQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAFYEIL
HLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHLPNLTEEQRNGFIQSLKDDPS
VSKEILAEAKKLNDAQAPKEEDNKKPGKEDGNKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDNN
KPGKEDGNKPGKEDGNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADA
NKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL

Sequences:

>Translated_520_residues
MMTLQIHTGGINLKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQNAFYQVLNMPNLNADQRNGFIQSL
KDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNKDQQSAFYEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNE
SQAPKADNNFNKEQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAFYEIL
HLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHLPNLTEEQRNGFIQSLKDDPS
VSKEILAEAKKLNDAQAPKEEDNKKPGKEDGNKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDNN
KPGKEDGNKPGKEDGNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADA
NKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL
>Mature_520_residues
MMTLQIHTGGINLKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQNAFYQVLNMPNLNADQRNGFIQSL
KDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNKDQQSAFYEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNE
SQAPKADNNFNKEQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAFYEIL
HLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHLPNLTEEQRNGFIQSLKDDPS
VSKEILAEAKKLNDAQAPKEEDNKKPGKEDGNKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDNN
KPGKEDGNKPGKEDGNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADA
NKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005877
- InterPro:   IPR019948
- InterPro:   IPR009063
- InterPro:   IPR019931
- InterPro:   IPR005038
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003132
- InterPro:   IPR001899 [H]

Pfam domain/function: PF02216 B; PF00746 Gram_pos_anchor; PF01476 LysM; PF03373 Octapeptide; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 56720; Mature: 56720

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50847 GRAM_POS_ANCHORING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLQIHTGGINLKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQNAFY
CEEEEEECCCCEEEHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
QVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNKDQQSAF
HHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHH
YEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNKEQQNAFYE
HHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHH
ILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAFYEIL
HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHH
HLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHL
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHC
PNLTEEQRNGFIQSLKDDPSVSKEILAEAKKLNDAQAPKEEDNKKPGKEDGNKPGKEDGN
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHCCCCHHHCCCCCCCCCCCCCCCCCC
KPGKEDNKKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDGNKPGK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADA
CCCCEEEEECCCCHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCHHHEECCCCCCCCCCC
NKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL
HHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMTLQIHTGGINLKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQNAFY
CEEEEEECCCCEEEHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
QVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAQKLNDSQAPKADAQQNNFNKDQQSAF
HHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHH
YEILNMPNLNEAQRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNKEQQNAFYE
HHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHH
ILNMPNLNEEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAFYEIL
HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHH
HLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHL
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHC
PNLTEEQRNGFIQSLKDDPSVSKEILAEAKKLNDAQAPKEEDNKKPGKEDGNKPGKEDGN
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHCCCCHHHCCCCCCCCCCCCCCCCCC
KPGKEDNKKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDGNKPGK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADA
CCCCEEEEECCCCHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCHHHEECCCCCCCCCCC
NKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL
HHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6319407; 6338496 [H]