| Definition | Acidiphilium cryptum JF-5 plasmid pACRY04, complete sequence. |
|---|---|
| Accession | NC_009470 |
| Length | 37,415 |
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The map label for this gene is yhiD [C]
Identifier: 148244069
GI number: 148244069
Start: 13258
End: 13974
Strand: Direct
Name: yhiD [C]
Synonym: Acry_3566
Alternate gene names: 148244069
Gene position: 13258-13974 (Clockwise)
Preceding gene: 148244068
Following gene: 148244070
Centisome position: 35.43
GC content: 65.97
Gene sequence:
>717_bases ATGACCGATTTATCCCAACCGTTTCCGGTTCCATTTCTCACGACAGTCGGTGATTTCGCGGTCGCCTTCGTGCTCGGCAC CCTGATCGGTGCCGAACGCCAATGGCGGCAGCGCTCCGCCGGCCTGCGCACCACCGTTCTGGTCGCCCTCGGCGCCGCCG CCTTCGCCGATCTCGGGGTTCGCCTCGCCGGTCCCGCCGGATCGACCCGCGTGGTCGCCTACATCGTCTCCGGCATCGGC TTTCTCGGCGCCGGCGTCATCCTGAAGGAGGGCGCCAATATCCGCGGCATCAACACGGCGGGAACCCTCTGGTGCTCGGC TGCGGTCGGCGCGTTCTGTGGCTGCGGCTACTCCGCCGAGGCCACCTTGCTGACCGTTTTCATCCTTGCCGGCAACACGC TGCTCCGTCCCCTCGTGAATTACATCAACCGCCGGCCGATCGACGCGCGCGCCACCGAAGCGCAATACGCGATCCATGCG CTGTGCGACCCGGCCGACGTGTCGGATGTGCGCGACCTTTTGTTCTCCGAACTGGAGGCCGCACACTACCCGATCCGCGA GATCGCCACCCTATCCGACAGCGAGGAACTGGTTGAACTGGCGGCAACCCTGGTGCCCACCAACGCCAAACCCGACGAAC TCGATGCCGTCGTCGCCGCACTGGAAAAAGCCGGCCCGATCAAGACCGCAACCTGGACCGTCAGCACCACGGCCTGA
Upstream 100 bases:
>100_bases TGTTCTGGGGTCTGCGCCTCTATATCGGCGTCATGCTGATCATCATGGGCTGGGGATTTCTTCACGTTGCGGGGGGATAG GCTGATCAGCGAGGTTTTGA
Downstream 100 bases:
>100_bases TCGCGAGTTCCTGAAGCGAAAATCACTTTGTTGCCGGAAAAGGGAGGATTGATTGGCGCAAAGAAGATTGCTGACAGACG AAGAACGCCATGTTCTCCTT
Product: MgtC/SapB transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTDLSQPFPVPFLTTVGDFAVAFVLGTLIGAERQWRQRSAGLRTTVLVALGAAAFADLGVRLAGPAGSTRVVAYIVSGIG FLGAGVILKEGANIRGINTAGTLWCSAAVGAFCGCGYSAEATLLTVFILAGNTLLRPLVNYINRRPIDARATEAQYAIHA LCDPADVSDVRDLLFSELEAAHYPIREIATLSDSEELVELAATLVPTNAKPDELDAVVAALEKAGPIKTATWTVSTTA
Sequences:
>Translated_238_residues MTDLSQPFPVPFLTTVGDFAVAFVLGTLIGAERQWRQRSAGLRTTVLVALGAAAFADLGVRLAGPAGSTRVVAYIVSGIG FLGAGVILKEGANIRGINTAGTLWCSAAVGAFCGCGYSAEATLLTVFILAGNTLLRPLVNYINRRPIDARATEAQYAIHA LCDPADVSDVRDLLFSELEAAHYPIREIATLSDSEELVELAATLVPTNAKPDELDAVVAALEKAGPIKTATWTVSTTA >Mature_237_residues TDLSQPFPVPFLTTVGDFAVAFVLGTLIGAERQWRQRSAGLRTTVLVALGAAAFADLGVRLAGPAGSTRVVAYIVSGIGF LGAGVILKEGANIRGINTAGTLWCSAAVGAFCGCGYSAEATLLTVFILAGNTLLRPLVNYINRRPIDARATEAQYAIHAL CDPADVSDVRDLLFSELEAAHYPIREIATLSDSEELVELAATLVPTNAKPDELDAVVAALEKAGPIKTATWTVSTTA
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=128, Percent_Identity=38.28125, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 24875; Mature: 24744
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSQPFPVPFLTTVGDFAVAFVLGTLIGAERQWRQRSAGLRTTVLVALGAAAFADLGV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCE RLAGPAGSTRVVAYIVSGIGFLGAGVILKEGANIRGINTAGTLWCSAAVGAFCGCGYSAE EEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCEECCCCHHHHHHHHHHHHHHCCCCCCH ATLLTVFILAGNTLLRPLVNYINRRPIDARATEAQYAIHALCDPADVSDVRDLLFSELEA HHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AHYPIREIATLSDSEELVELAATLVPTNAKPDELDAVVAALEKAGPIKTATWTVSTTA HHCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC >Mature Secondary Structure TDLSQPFPVPFLTTVGDFAVAFVLGTLIGAERQWRQRSAGLRTTVLVALGAAAFADLGV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCE RLAGPAGSTRVVAYIVSGIGFLGAGVILKEGANIRGINTAGTLWCSAAVGAFCGCGYSAE EEECCCCCHHHHHHHHHHHHHHHHHHHEECCCCEECCCCHHHHHHHHHHHHHHCCCCCCH ATLLTVFILAGNTLLRPLVNYINRRPIDARATEAQYAIHALCDPADVSDVRDLLFSELEA HHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AHYPIREIATLSDSEELVELAATLVPTNAKPDELDAVVAALEKAGPIKTATWTVSTTA HHCCHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]