| Definition | Acidiphilium cryptum JF-5 plasmid pACRY04, complete sequence. |
|---|---|
| Accession | NC_009470 |
| Length | 37,415 |
Click here to switch to the map view.
The map label for this gene is yaiN [C]
Identifier: 148244066
GI number: 148244066
Start: 10734
End: 11249
Strand: Reverse
Name: yaiN [C]
Synonym: Acry_3563
Alternate gene names: 148244066
Gene position: 11249-10734 (Counterclockwise)
Preceding gene: 148244071
Following gene: 148244060
Centisome position: 30.07
GC content: 60.08
Gene sequence:
>516_bases ATGGGCGGGGTTCAGCGCGTTGCGCGCATCACTCCAGCCGCGTATCCGGCCCGGGCAATCGTCCATCCCACGGTTGAACG GACAGCAAGCGAAAAGCGCTTACTATCGTCCTCCGAAGGCTGGCTGGTCGATCGCGGTTTCATGGGGTCCTTGGAAAGTT GGTTGATCAAAACCGCGGAAATTCGCCTTCCGCAGCTATCCGTGCCATATACCCCCCCCATAGTATCTGGTCAAGAGGCG ATGCAATACACCGAAAAGGAAAAACGCAAGCTGGTGAACCGGCTCAGCCGCATTCGCGGCCAAGTCGAGGCGATGCAGGC GGCGCTGGACGCGGATGCGCGATGCACGGCATTGTTGCAGCAGGCAACGGCGTGCCGCGGTGCGTTGGACGGGTTCATCG GCACCGTGATCGAACACCATATCCGCCAGCATATCGTCGATCCAAAGCAGCAGGAGACCGATCGCGCTCAGGCGGCGGAG GAACTGATCGGTGTGGTTCATTCCTACCTGACGTAG
Upstream 100 bases:
>100_bases GGGTTACTCCTGATCGGCGAAGACGGCCGATCAGTTCGTTTTCTGCAGAAGATCATCGTGATCCCTCCTCCTGGTCAGCA TTGGCTGGAACCCGGGAGGG
Downstream 100 bases:
>100_bases GTTGAATTACGTAGGTTGAATTTCTGATCAAACCGCCCCAATGGCGACAGGGTCGGCCCCCAACAATTTGATACCAGGCG ACTTCAATGTCCCATCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MGGVQRVARITPAAYPARAIVHPTVERTASEKRLLSSSEGWLVDRGFMGSLESWLIKTAEIRLPQLSVPYTPPIVSGQEA MQYTEKEKRKLVNRLSRIRGQVEAMQAALDADARCTALLQQATACRGALDGFIGTVIEHHIRQHIVDPKQQETDRAQAAE ELIGVVHSYLT
Sequences:
>Translated_171_residues MGGVQRVARITPAAYPARAIVHPTVERTASEKRLLSSSEGWLVDRGFMGSLESWLIKTAEIRLPQLSVPYTPPIVSGQEA MQYTEKEKRKLVNRLSRIRGQVEAMQAALDADARCTALLQQATACRGALDGFIGTVIEHHIRQHIVDPKQQETDRAQAAE ELIGVVHSYLT >Mature_170_residues GGVQRVARITPAAYPARAIVHPTVERTASEKRLLSSSEGWLVDRGFMGSLESWLIKTAEIRLPQLSVPYTPPIVSGQEAM QYTEKEKRKLVNRLSRIRGQVEAMQAALDADARCTALLQQATACRGALDGFIGTVIEHHIRQHIVDPKQQETDRAQAAEE LIGVVHSYLT
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=90, Percent_Identity=38.8888888888889, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=38.8888888888889, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 18927; Mature: 18796
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGVQRVARITPAAYPARAIVHPTVERTASEKRLLSSSEGWLVDRGFMGSLESWLIKTAE CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHH IRLPQLSVPYTPPIVSGQEAMQYTEKEKRKLVNRLSRIRGQVEAMQAALDADARCTALLQ HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QATACRGALDGFIGTVIEHHIRQHIVDPKQQETDRAQAAEELIGVVHSYLT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGVQRVARITPAAYPARAIVHPTVERTASEKRLLSSSEGWLVDRGFMGSLESWLIKTAE CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHH IRLPQLSVPYTPPIVSGQEAMQYTEKEKRKLVNRLSRIRGQVEAMQAALDADARCTALLQ HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QATACRGALDGFIGTVIEHHIRQHIVDPKQQETDRAQAAEELIGVVHSYLT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA