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The map label for this gene is tnpR [H]

Identifier: 148243773

GI number: 148243773

Start: 169564

End: 169914

Strand: Reverse

Name: tnpR [H]

Synonym: Acry_3256

Alternate gene names: 148243773

Gene position: 169914-169564 (Counterclockwise)

Preceding gene: 148243774

Following gene: 148243772

Centisome position: 83.46

GC content: 63.82

Gene sequence:

>351_bases
GTGGAAGGCGGCAGGCTTTCCTGTCAAAATCTAGAAGTTTCTCAGCTGCGTCGCTTTTCACTGGCCGAGCGGTGGGCCGA
TACCACGACGCCGGCCGGCCGCATGGTGCTGACTGTGTTCGCCGGCATGGCCGATTTCGAGCGGTCCCTTATTGTCGAAC
GCACCAGCACCGGCAGGATCGCAGCCAAGGCGCGCGGTGTGCGCTTTGGGCCGCGGCCTGCTCTCGCGGCCGAGCAGATC
GCTCATGCCCGTCAGCTCATCGAGACGGACGGCAAACCCGTGGCCGAGGTTGCCCGTTTGCTGGGTGTCCACCGGGCCAC
ACTCTACCGAGCCTTGGAAAAACACCAATAG

Upstream 100 bases:

>100_bases
CCTATTGCCGTGGGCCATACTGCGTTCTCTCCTTCGAGGCGGTGGCGCGTCTTCGCACACGTGGCATCGAAGCGATGCGA
CTGGAGGAGGGTTATCCCGA

Downstream 100 bases:

>100_bases
GGCGGCCGGGGAAGGGCGTTCGATTTCCGAAGGTCCTAAATTAGGGAATGCGGCAAGTTCCCGGTCGCGTTGCTGACAAA
TTCGTCGGACCAGAGGGAAC

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MEGGRLSCQNLEVSQLRRFSLAERWADTTTPAGRMVLTVFAGMADFERSLIVERTSTGRIAAKARGVRFGPRPALAAEQI
AHARQLIETDGKPVAEVARLLGVHRATLYRALEKHQ

Sequences:

>Translated_116_residues
MEGGRLSCQNLEVSQLRRFSLAERWADTTTPAGRMVLTVFAGMADFERSLIVERTSTGRIAAKARGVRFGPRPALAAEQI
AHARQLIETDGKPVAEVARLLGVHRATLYRALEKHQ
>Mature_116_residues
MEGGRLSCQNLEVSQLRRFSLAERWADTTTPAGRMVLTVFAGMADFERSLIVERTSTGRIAAKARGVRFGPRPALAAEQI
AHARQLIETDGKPVAEVARLLGVHRATLYRALEKHQ

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787827, Length=121, Percent_Identity=33.0578512396694, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1787638, Length=121, Percent_Identity=33.0578512396694, Blast_Score=63, Evalue=4e-12,
Organism=Escherichia coli, GI1787404, Length=84, Percent_Identity=45.2380952380952, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 12812; Mature: 12812

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGGRLSCQNLEVSQLRRFSLAERWADTTTPAGRMVLTVFAGMADFERSLIVERTSTGRI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AAKARGVRFGPRPALAAEQIAHARQLIETDGKPVAEVARLLGVHRATLYRALEKHQ
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEGGRLSCQNLEVSQLRRFSLAERWADTTTPAGRMVLTVFAGMADFERSLIVERTSTGRI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AAKARGVRFGPRPALAAEQIAHARQLIETDGKPVAEVARLLGVHRATLYRALEKHQ
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2170815; 2555186 [H]