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The map label for this gene is vapA [H]

Identifier: 148243763

GI number: 148243763

Start: 155937

End: 156224

Strand: Reverse

Name: vapA [H]

Synonym: Acry_3241

Alternate gene names: 148243763

Gene position: 156224-155937 (Counterclockwise)

Preceding gene: 148243764

Following gene: 148243761

Centisome position: 76.73

GC content: 58.68

Gene sequence:

>288_bases
ATGATGAATAATCCGCCACATCCTGGCGAACTGCTAAGAGAGGATGTCATCGGTGAGCTGGGGCTTTCCGTTACCGAGGC
CGCCCAGAGGCTGGCTATGTCCCGCGCAGCGTTGTCGCGTGTGTTGAACGCCAGGGCTGCCATTAGCCCTGATTTGGCGA
TCCGGCTTGAACAGGCTGGCGTGAGCACGGCGCAGGCATGGCTTGGGATGCAGGCAAACTATGATCTTTGGCTTGCACGA
CAACACCAGCAGCCACCAGTGCGCCGTTTTCAGGAAAATGCGGCCTGA

Upstream 100 bases:

>100_bases
GGTCCGTGTGGGTCAACGGGAATTGGAGAGTGACATTTCGGTTCGTTGAGGCTGGCGTTGAGTTGGTGAATTATCAAGAC
TACCACTAGGAGAAGGTAAA

Downstream 100 bases:

>100_bases
ACAACCAAGTTCGGGCAGCGACCAGTAGACTCATGGACTTATTGTTATCGACCTAGGGTCTGGACGCCGATCGGCATTCC
AAGCAGCTGATTCGAAATAC

Product: XRE family plasmid maintenance system antidote protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MMNNPPHPGELLREDVIGELGLSVTEAAQRLAMSRAALSRVLNARAAISPDLAIRLEQAGVSTAQAWLGMQANYDLWLAR
QHQQPPVRRFQENAA

Sequences:

>Translated_95_residues
MMNNPPHPGELLREDVIGELGLSVTEAAQRLAMSRAALSRVLNARAAISPDLAIRLEQAGVSTAQAWLGMQANYDLWLAR
QHQQPPVRRFQENAA
>Mature_95_residues
MMNNPPHPGELLREDVIGELGLSVTEAAQRLAMSRAALSRVLNARAAISPDLAIRLEQAGVSTAQAWLGMQANYDLWLAR
QHQQPPVRRFQENAA

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013430
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 10457; Mature: 10457

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNNPPHPGELLREDVIGELGLSVTEAAQRLAMSRAALSRVLNARAAISPDLAIRLEQAG
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHCC
VSTAQAWLGMQANYDLWLARQHQQPPVRRFQENAA
CHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCC
>Mature Secondary Structure
MMNNPPHPGELLREDVIGELGLSVTEAAQRLAMSRAALSRVLNARAAISPDLAIRLEQAG
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHCC
VSTAQAWLGMQANYDLWLARQHQQPPVRRFQENAA
CHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1398971 [H]