Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243760
Identifier: 148243760
GI number: 148243760
Start: 153038
End: 154276
Strand: Reverse
Name: 148243760
Synonym: Acry_3238
Alternate gene names: NA
Gene position: 154276-153038 (Counterclockwise)
Preceding gene: 148243761
Following gene: 148243758
Centisome position: 75.78
GC content: 65.94
Gene sequence:
>1239_bases GTGGCGAACGCCTCGGATCATATCCGCGGCATCGCGGCCAATCGCGGCCAGTTTACGCTACAGGCGCTACAGGTCTTCTT CGTCGGTCTTGTCATCGGCATGGAGCGCGCGGTCCTGCCGACCCTCGCGCACGAGTTCGGCGTCGCACCCGGTGCCTTTC TCTTTCTCGCGAGTTTCGTGCTCTCCTTCGGCCTGGTGAAGGGCGCGCTCAACCTTGTCGCCGGCGGGCTCGCCGACCGG TTCGGCCGCAAGCCTGTCCTCATTGCCGGCTGGATCGCAGCCATTCCCATCCCGCTGCTGATCTGGGCGGCACCCAACTG GTGGTGGATCGTGATCGCGAACGTGTTTCTCGGGATCAGCCAGGGCTTCACATGGACGATGACGGTGACCAGCCAGATTG ACCTCGCCGGCAGTCACCAGCGCGGGCTTGCCGTCGGCATCAACGAGGCTACTGGATATGTTGCCGTCGGTCTGGCCGGC GCCGTGGCCGCCCTGCTGGCCGAGGCGGTCGGCGCGCGTAATGCACTGCTAATTTTCGGCATGGCCACGATTGTTCTGGC CTTCGCCACGATCACCCGGGTCCGCGATACGCTCGCTTGGGTCAAGGCCGAACATGCCGAGGCCGGTGCCGGCGCGTCGC AGGATCATACGCTCACGCTACGCGAGATCTTCGTCCGCATCTCTTTCCGCGATCGGGTCGGGCGGGCGATCTGCCAGGGC GGTATCGTCAACAAAATCGCCGACACGCTGGTCTGGGTGATGTTCCCGCTGTTTTTCAAATCACATGGCGCAAAGCTGAT CGAAATCGGCTGGCTGACCGGCACCTACGCCATGGTCTGGGGCGTCTCGCAGCTCTGGACCGGCCATCTGGGCGACCGGG TCGGCCGCCGCGCCCCGGTGATCGTCGGGTTCTTCCTCCTGGCCGCCGGCATCGCGATCACGGCGGCCGGGCGCGATGCG TCGCTCTGGCTGCCGGGGGCGATCGTTATGGGCCTCGGCATGGCGCTGCTCTATCCTAATCTCATCGCCGCGATGTCGGA CCGTGCAGCACCGCTGATCCGCGGCAAGGCCCTCGGCACCTACCGCTACTGGCGCGACACCGGCTACGCGCTCGGCGCCG TCGCGCTCGGCCTCATCGCTCAATTTGCGCAGGCAACCCTTCCGACGCTCTGGATCACGGCGGTCCTCGTGGCCGGATCA GGAATCTGGCTCATGCGGGATCTGCCCCGCCCTCAATGA
Upstream 100 bases:
>100_bases CCGAGCGCTTCGTCGCCTTCATGCTCGAGAATATCCCGCCCGCCCCCGAGGGCGCAGCCGAACTGCGTGCCTGGAATGCG GGCTTCACCGCGTGACCACG
Downstream 100 bases:
>100_bases AACCTCTCGTCACTTCCGCCGCTTCTTTTGGCTGGCTCCAGGGGATAGCGCGTCGATAATCCGGCATTCGGCAACCGTCC CCTGGCGGCACTGACTGATC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; Facilitator Family Transporter; Facilitator Superfamily Protein; Tetracyclin Resistance Protein; Transporter Facilitator Family; MFS Transporter Permease; Multidrug Drug Efflux Protein; Formamidopyrimidine-DNA Glycosylase
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MANASDHIRGIAANRGQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFVLSFGLVKGALNLVAGGLADR FGRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGISQGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGLAG AVAALLAEAVGARNALLIFGMATIVLAFATITRVRDTLAWVKAEHAEAGAGASQDHTLTLREIFVRISFRDRVGRAICQG GIVNKIADTLVWVMFPLFFKSHGAKLIEIGWLTGTYAMVWGVSQLWTGHLGDRVGRRAPVIVGFFLLAAGIAITAAGRDA SLWLPGAIVMGLGMALLYPNLIAAMSDRAAPLIRGKALGTYRYWRDTGYALGAVALGLIAQFAQATLPTLWITAVLVAGS GIWLMRDLPRPQ
Sequences:
>Translated_412_residues MANASDHIRGIAANRGQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFVLSFGLVKGALNLVAGGLADR FGRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGISQGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGLAG AVAALLAEAVGARNALLIFGMATIVLAFATITRVRDTLAWVKAEHAEAGAGASQDHTLTLREIFVRISFRDRVGRAICQG GIVNKIADTLVWVMFPLFFKSHGAKLIEIGWLTGTYAMVWGVSQLWTGHLGDRVGRRAPVIVGFFLLAAGIAITAAGRDA SLWLPGAIVMGLGMALLYPNLIAAMSDRAAPLIRGKALGTYRYWRDTGYALGAVALGLIAQFAQATLPTLWITAVLVAGS GIWLMRDLPRPQ >Mature_411_residues ANASDHIRGIAANRGQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFVLSFGLVKGALNLVAGGLADRF GRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGISQGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGLAGA VAALLAEAVGARNALLIFGMATIVLAFATITRVRDTLAWVKAEHAEAGAGASQDHTLTLREIFVRISFRDRVGRAICQGG IVNKIADTLVWVMFPLFFKSHGAKLIEIGWLTGTYAMVWGVSQLWTGHLGDRVGRRAPVIVGFFLLAAGIAITAAGRDAS LWLPGAIVMGLGMALLYPNLIAAMSDRAAPLIRGKALGTYRYWRDTGYALGAVALGLIAQFAQATLPTLWITAVLVAGSG IWLMRDLPRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43833; Mature: 43702
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANASDHIRGIAANRGQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFV CCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LSFGLVKGALNLVAGGLADRFGRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGIS HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCHHHEEEECCCCHHHHHHHHHHHHC QGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGLAGAVAALLAEAVGARNALLIFG CCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH MATIVLAFATITRVRDTLAWVKAEHAEAGAGASQDHTLTLREIFVRISFRDRVGRAICQG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC GIVNKIADTLVWVMFPLFFKSHGAKLIEIGWLTGTYAMVWGVSQLWTGHLGDRVGRRAPV CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHH IVGFFLLAAGIAITAAGRDASLWLPGAIVMGLGMALLYPNLIAAMSDRAAPLIRGKALGT HHHHHHHHHHHEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC YRYWRDTGYALGAVALGLIAQFAQATLPTLWITAVLVAGSGIWLMRDLPRPQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure ANASDHIRGIAANRGQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFV CCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LSFGLVKGALNLVAGGLADRFGRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGIS HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCHHHEEEECCCCHHHHHHHHHHHHC QGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGLAGAVAALLAEAVGARNALLIFG CCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH MATIVLAFATITRVRDTLAWVKAEHAEAGAGASQDHTLTLREIFVRISFRDRVGRAICQG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC GIVNKIADTLVWVMFPLFFKSHGAKLIEIGWLTGTYAMVWGVSQLWTGHLGDRVGRRAPV CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHH IVGFFLLAAGIAITAAGRDASLWLPGAIVMGLGMALLYPNLIAAMSDRAAPLIRGKALGT HHHHHHHHHHHEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC YRYWRDTGYALGAVALGLIAQFAQATLPTLWITAVLVAGSGIWLMRDLPRPQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA