Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243731
Identifier: 148243731
GI number: 148243731
Start: 117812
End: 118915
Strand: Reverse
Name: 148243731
Synonym: Acry_3207
Alternate gene names: NA
Gene position: 118915-117812 (Counterclockwise)
Preceding gene: 148243732
Following gene: 148243723
Centisome position: 58.41
GC content: 66.12
Gene sequence:
>1104_bases GTGGCTGCTCCTCTCGGGATGATAGAGCGTGGTTGTGTGTGCATCGGCCGCAAGCATCGAGGAGGAGCAGCCGTGGAATA CTTTGCCGGGTTGGATGTGTCGTTGGAAGAGACCGCGGTCTGCGTGGTCGATGGGACGGGTGGAATTGTGCGTGAAGCGC GGGTTGCCAGCGAGCCGGAGGCGCTGGTCGCCTTCTTCGGGGCATCCGGGATGGAGATGGCGCGGGTCGGTCTGGAGGCG TGCTCGCTGACGGCCTGGCTGCAAGCGGGGCTTTCGGATGCTGGCATTCCGGCGATCTGTATCGAAGCGCGTCAGGCGAA GGCCGCGATGGGTGCGATGCCGAACAAGACCGACCGCAACGACGCGCGCGGCATCGCGCAGATCATGCGCACCGGATGGT ATCGTGCGGTGCATGTGAAAAGCCCGCCCTGCCGCTCCTGGCGCGCGTTGCTGACGGCGCGGCGGATGCTGCTGAACAAG CGTCGTGATGTCGAGAACGGCATTCGGGCGTTGCTGCGCGAGGTCGGGTTGAAGGTTGGTACGCCAAGCCGCAAGGACTT TGGAGCTCGCGTGCGTGAATTGGTAGCGGATGACCCGGTGCTGGTGAGCCTGGCTGGATCGCTGCTGGCCGCTGTCGAGA CAATGACCCGGGAGGTGGAGCGGCTGACCAGGCGCGTGCTCGACGAGGTGCGCGTGGAGCCAACATGCAGGCGGCTTATG ACAGTGCCGGGCGTCGGCCCGCTGACGGCGTTGGCGTTCCGTGCCACGATCGACCAACCGGACCGCTTTCGAAGGTCGCG CGATGTCGGCGCGCATCTTGGCCTGACGCCGCGACGCTACCAGTCCGGCGAAACCGACGTGCAGGGCCGCATCAGCCGAT GTGGTGACGAACTGGCCCGAACGGCGCTGTACGAGGCAGCCCATTCGTTGCTGATCCGCAGCACCAAATGGTCGGCGCTG CGGGCATGGGGCATGAACGTGGCCAAGCGCCGGGGCATGGCGCGCGCCCGCGTCGCTGTGGCGCGCAAGCTGGCGGTGAT CCTGCATCGCATGTGGATCGATGGCAGCGAGTTCTGCTGGGGCAAACAGGCCACCGTAGCATGA
Upstream 100 bases:
>100_bases CTCTACGCCGCCTCCAGCGTGTTCTTGCTGAGGCGCCTCGCTCGTTGACTATCCGATTCGAAATAGATGGGGTGATTGGG GTCTCACCCGGGTGATCTGG
Downstream 100 bases:
>100_bases GAAAAGGAGTTGCAGCTTCCGCCTGACGAGGGCGGAGTCAGTGTCGTTCCCGTGGGGACGATGGACGAGGTGATCTCGTT GAGAGTCCGGATCCCCGCGA
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MAAPLGMIERGCVCIGRKHRGGAAVEYFAGLDVSLEETAVCVVDGTGGIVREARVASEPEALVAFFGASGMEMARVGLEA CSLTAWLQAGLSDAGIPAICIEARQAKAAMGAMPNKTDRNDARGIAQIMRTGWYRAVHVKSPPCRSWRALLTARRMLLNK RRDVENGIRALLREVGLKVGTPSRKDFGARVRELVADDPVLVSLAGSLLAAVETMTREVERLTRRVLDEVRVEPTCRRLM TVPGVGPLTALAFRATIDQPDRFRRSRDVGAHLGLTPRRYQSGETDVQGRISRCGDELARTALYEAAHSLLIRSTKWSAL RAWGMNVAKRRGMARARVAVARKLAVILHRMWIDGSEFCWGKQATVA
Sequences:
>Translated_367_residues MAAPLGMIERGCVCIGRKHRGGAAVEYFAGLDVSLEETAVCVVDGTGGIVREARVASEPEALVAFFGASGMEMARVGLEA CSLTAWLQAGLSDAGIPAICIEARQAKAAMGAMPNKTDRNDARGIAQIMRTGWYRAVHVKSPPCRSWRALLTARRMLLNK RRDVENGIRALLREVGLKVGTPSRKDFGARVRELVADDPVLVSLAGSLLAAVETMTREVERLTRRVLDEVRVEPTCRRLM TVPGVGPLTALAFRATIDQPDRFRRSRDVGAHLGLTPRRYQSGETDVQGRISRCGDELARTALYEAAHSLLIRSTKWSAL RAWGMNVAKRRGMARARVAVARKLAVILHRMWIDGSEFCWGKQATVA >Mature_366_residues AAPLGMIERGCVCIGRKHRGGAAVEYFAGLDVSLEETAVCVVDGTGGIVREARVASEPEALVAFFGASGMEMARVGLEAC SLTAWLQAGLSDAGIPAICIEARQAKAAMGAMPNKTDRNDARGIAQIMRTGWYRAVHVKSPPCRSWRALLTARRMLLNKR RDVENGIRALLREVGLKVGTPSRKDFGARVRELVADDPVLVSLAGSLLAAVETMTREVERLTRRVLDEVRVEPTCRRLMT VPGVGPLTALAFRATIDQPDRFRRSRDVGAHLGLTPRRYQSGETDVQGRISRCGDELARTALYEAAHSLLIRSTKWSALR AWGMNVAKRRGMARARVAVARKLAVILHRMWIDGSEFCWGKQATVA
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 40099; Mature: 39968
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPLGMIERGCVCIGRKHRGGAAVEYFAGLDVSLEETAVCVVDGTGGIVREARVASEPE CCCCHHHHHCCCEEECCCCCCCCHHHHHHCCCCEECCCEEEEEECCCCHHHHHHHCCCCH ALVAFFGASGMEMARVGLEACSLTAWLQAGLSDAGIPAICIEARQAKAAMGAMPNKTDRN HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCH DARGIAQIMRTGWYRAVHVKSPPCRSWRALLTARRMLLNKRRDVENGIRALLREVGLKVG HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC TPSRKDFGARVRELVADDPVLVSLAGSLLAAVETMTREVERLTRRVLDEVRVEPTCRRLM CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TVPGVGPLTALAFRATIDQPDRFRRSRDVGAHLGLTPRRYQSGETDVQGRISRCGDELAR CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH TALYEAAHSLLIRSTKWSALRAWGMNVAKRRGMARARVAVARKLAVILHRMWIDGSEFCW HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GKQATVA CCCCCCC >Mature Secondary Structure AAPLGMIERGCVCIGRKHRGGAAVEYFAGLDVSLEETAVCVVDGTGGIVREARVASEPE CCCHHHHHCCCEEECCCCCCCCHHHHHHCCCCEECCCEEEEEECCCCHHHHHHHCCCCH ALVAFFGASGMEMARVGLEACSLTAWLQAGLSDAGIPAICIEARQAKAAMGAMPNKTDRN HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCH DARGIAQIMRTGWYRAVHVKSPPCRSWRALLTARRMLLNKRRDVENGIRALLREVGLKVG HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC TPSRKDFGARVRELVADDPVLVSLAGSLLAAVETMTREVERLTRRVLDEVRVEPTCRRLM CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TVPGVGPLTALAFRATIDQPDRFRRSRDVGAHLGLTPRRYQSGETDVQGRISRCGDELAR CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHH TALYEAAHSLLIRSTKWSALRAWGMNVAKRRGMARARVAVARKLAVILHRMWIDGSEFCW HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GKQATVA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1324903; 12704232 [H]