Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243725
Identifier: 148243725
GI number: 148243725
Start: 108038
End: 109294
Strand: Direct
Name: 148243725
Synonym: Acry_3201
Alternate gene names: NA
Gene position: 108038-109294 (Clockwise)
Preceding gene: 148243724
Following gene: 148243726
Centisome position: 53.07
GC content: 63.01
Gene sequence:
>1257_bases ATGGACGAGGACTGGCAGGGAGATCTGGAGCGGTGGCTTGCCCCTTATCTGAAAGGTCTGGGCAACAAGACGCGACGACG GATGTGCCCGGCTTATATCGCCGGCTTGATCGGGCCGGGTGATCGCAAAAGCATCCAGCCCATGGCGGCCCGGTCGGACG CCATTTCCTATGACCGGCTGCATCATTTCATCGGGGCTGGTCTGTGGGACAGCGCGCCACTGGAAGCGACCTTGTGGGAC CAAGCGGATAAATTGGTTGGTGGCAATGAAGCCTGGCTGATCATCGACGACACCGCCTTGCCCAAGAAGGGTAAGGCCTC GGTTGGCGTCGCGCCGCAATATGCTACGGCGCTCGGCAAGAATGCCAACTGTCAGACGCTGGTGTCGGTGACGCTGGCTT CGGGCGCAGTTCCGCTCATGCTGAGCTTGCGGTTATTTCTGCCGGAAAGCTGGACGAGCGATATCGCGCGCATGGACAAG GCGGGCGTGCCTGCCTGTTTCCAGGAATACCGCACAAAGCCCGAGATCGCGATCGAGGAGATCGATCGCGTCATCGCTGC CGGCGTGCGCTTCGGCTGTGTGCTGGCCGATGCCGGTTACGGGCTGTCGGCTCCGTTCCGGCAGGCGCTGAGTACACGCG GCCTTTGCTGGGCTGTCGGCATCCCCCGGCACCAGAAGGTCTATCCGGCGGATGTGCAGCTGATCTTCCCGGTCGCAGGC CGCGGTCGCCCACGGGTGCGTCATGTGCCCGACGTCAAATCCATGGCGGCACAAGCGATGCTCGAAGGCGCGAAGTGGCG GCAGCTCGGTTGGCGCAAGGGAACAAAGGGGCGTCTGACAGCCCGCTTTGCCGCCATGAGGGTACGCATTGCTGATGGCG CGCCCCAGCGAATCGGTTCTGCCGGTGCCCAGCACATGCCGGGAGAGGAAGCCTGGCTGGTGGGTGAGCATCGCTCGAAT GGCGAACGAAAATACTATCTCTCGAACCTGCCTGCCGACACCCCGATCAGAGCTCTGGCTGGCGCCATCAAGGCGCGCTG GATCTGCGAGCAGGCCCATCAGCAACTCAAAGAGGAACTCGGCTTGGACCACTTCGAGGGCCGATCCTGGACTGGCCTCC ACCGCCATGCCCTGATGACGATGATGGCCTACGCCTTCTTGCAATCCCGAAGGCTCGCTCAGGCGGGACGGAAAAAAAAG AGTCCCCGGTCCGCCTCCCCAACCCACCCTGCCAGCAGTGCGCCAAGCCATCCTTGA
Upstream 100 bases:
>100_bases CTATAGATGTTAGCACTACTTTGGCAGAAATCTGATTTTTAGGATTCCCATGGCACGGATTGCGTGATTCATGGGGAGCC AGCTTTGATGGAGGCTGGCG
Downstream 100 bases:
>100_bases CCGTCTTTCTCGCTCACCGCCGCGGCATTGCCCTCATTGCGGATGTAGCCTCATCGGACATCACAACAAACTTCTGCCAA AGTAGTGTTAGGGGTGCAGG
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISXo8 Transposase; Transcriptional Regulator; ISRSO17-Transposase Protein; Regulatory; FOG Transposase; ISRSO17-Transposase; TylR-Like Regulatory Protein; Transposase IS; Isrso17-Transposase Protein; IS6 Family Transposase; Transposase ISRS; LOW QUALITY PROTEIN Transposase; Transposase-Like Protein; Transposase IS4 Protein; Transposase Remnant; Isrso17-Transposase; Secondary Metabolite Regulator; Transposase Of; IS Sequence; Transposase Protein; LOW QUALITY PROTEIN IS4 Family Transposase
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MDEDWQGDLERWLAPYLKGLGNKTRRRMCPAYIAGLIGPGDRKSIQPMAARSDAISYDRLHHFIGAGLWDSAPLEATLWD QADKLVGGNEAWLIIDDTALPKKGKASVGVAPQYATALGKNANCQTLVSVTLASGAVPLMLSLRLFLPESWTSDIARMDK AGVPACFQEYRTKPEIAIEEIDRVIAAGVRFGCVLADAGYGLSAPFRQALSTRGLCWAVGIPRHQKVYPADVQLIFPVAG RGRPRVRHVPDVKSMAAQAMLEGAKWRQLGWRKGTKGRLTARFAAMRVRIADGAPQRIGSAGAQHMPGEEAWLVGEHRSN GERKYYLSNLPADTPIRALAGAIKARWICEQAHQQLKEELGLDHFEGRSWTGLHRHALMTMMAYAFLQSRRLAQAGRKKK SPRSASPTHPASSAPSHP
Sequences:
>Translated_418_residues MDEDWQGDLERWLAPYLKGLGNKTRRRMCPAYIAGLIGPGDRKSIQPMAARSDAISYDRLHHFIGAGLWDSAPLEATLWD QADKLVGGNEAWLIIDDTALPKKGKASVGVAPQYATALGKNANCQTLVSVTLASGAVPLMLSLRLFLPESWTSDIARMDK AGVPACFQEYRTKPEIAIEEIDRVIAAGVRFGCVLADAGYGLSAPFRQALSTRGLCWAVGIPRHQKVYPADVQLIFPVAG RGRPRVRHVPDVKSMAAQAMLEGAKWRQLGWRKGTKGRLTARFAAMRVRIADGAPQRIGSAGAQHMPGEEAWLVGEHRSN GERKYYLSNLPADTPIRALAGAIKARWICEQAHQQLKEELGLDHFEGRSWTGLHRHALMTMMAYAFLQSRRLAQAGRKKK SPRSASPTHPASSAPSHP >Mature_418_residues MDEDWQGDLERWLAPYLKGLGNKTRRRMCPAYIAGLIGPGDRKSIQPMAARSDAISYDRLHHFIGAGLWDSAPLEATLWD QADKLVGGNEAWLIIDDTALPKKGKASVGVAPQYATALGKNANCQTLVSVTLASGAVPLMLSLRLFLPESWTSDIARMDK AGVPACFQEYRTKPEIAIEEIDRVIAAGVRFGCVLADAGYGLSAPFRQALSTRGLCWAVGIPRHQKVYPADVQLIFPVAG RGRPRVRHVPDVKSMAAQAMLEGAKWRQLGWRKGTKGRLTARFAAMRVRIADGAPQRIGSAGAQHMPGEEAWLVGEHRSN GERKYYLSNLPADTPIRALAGAIKARWICEQAHQQLKEELGLDHFEGRSWTGLHRHALMTMMAYAFLQSRRLAQAGRKKK SPRSASPTHPASSAPSHP
Specific function: Unknown
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45848; Mature: 45848
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEDWQGDLERWLAPYLKGLGNKTRRRMCPAYIAGLIGPGDRKSIQPMAARSDAISYDRL CCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHH HHFIGAGLWDSAPLEATLWDQADKLVGGNEAWLIIDDTALPKKGKASVGVAPQYATALGK HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCC NANCQTLVSVTLASGAVPLMLSLRLFLPESWTSDIARMDKAGVPACFQEYRTKPEIAIEE CCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHH IDRVIAAGVRFGCVLADAGYGLSAPFRQALSTRGLCWAVGIPRHQKVYPADVQLIFPVAG HHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECC RGRPRVRHVPDVKSMAAQAMLEGAKWRQLGWRKGTKGRLTARFAAMRVRIADGAPQRIGS CCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHEEEECCCCHHHHHC AGAQHMPGEEAWLVGEHRSNGERKYYLSNLPADTPIRALAGAIKARWICEQAHQQLKEEL CCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLDHFEGRSWTGLHRHALMTMMAYAFLQSRRLAQAGRKKKSPRSASPTHPASSAPSHP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDEDWQGDLERWLAPYLKGLGNKTRRRMCPAYIAGLIGPGDRKSIQPMAARSDAISYDRL CCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHH HHFIGAGLWDSAPLEATLWDQADKLVGGNEAWLIIDDTALPKKGKASVGVAPQYATALGK HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCC NANCQTLVSVTLASGAVPLMLSLRLFLPESWTSDIARMDKAGVPACFQEYRTKPEIAIEE CCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHH IDRVIAAGVRFGCVLADAGYGLSAPFRQALSTRGLCWAVGIPRHQKVYPADVQLIFPVAG HHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECC RGRPRVRHVPDVKSMAAQAMLEGAKWRQLGWRKGTKGRLTARFAAMRVRIADGAPQRIGS CCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHEEEECCCCHHHHHC AGAQHMPGEEAWLVGEHRSNGERKYYLSNLPADTPIRALAGAIKARWICEQAHQQLKEEL CCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GLDHFEGRSWTGLHRHALMTMMAYAFLQSRRLAQAGRKKKSPRSASPTHPASSAPSHP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA