Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243683
Identifier: 148243683
GI number: 148243683
Start: 58472
End: 59488
Strand: Direct
Name: 148243683
Synonym: Acry_3156
Alternate gene names: NA
Gene position: 58472-59488 (Clockwise)
Preceding gene: 148243682
Following gene: 148243685
Centisome position: 28.72
GC content: 65.0
Gene sequence:
>1017_bases ATGGAATGCAAGCGGATTTCGATCGACACGTCCAAGCATGCTTTCACGATCCACGCGGTGGACGAGAAAGAACGACCGGT TTTGCGCCACGACCTCCGGCGCGCGCAGATCGAGCGGTTCTTCGCCCGGCTGGCGCCGACCGAGGTGGCGCTCGAAGCCT GTGCCGGGGCGCACCACTGGCGCCGGCGGCTTATCGCCTTGGGCCACCTGGTGAAGCTGATCCCGCCGCAATACGTGAAG CCTTTCGTCAAACGCGGCAAGAATGATCGCAACGATGCTGAGGCCATCAGCGAGGCGGCGTCTCGGCCGACGATGCCGTT GGTGCCGGTGAAGACGGTGGCGGAGCAAGCCGCGGCGGTCATAGTCAAGCATCGAGAAATGCTGGTTGGGCAGCGGACCC AGACGATCAACGTGCTCCGCGGGCACGCGGCGGAGTTCGGTATCGTCGCGGCCAAAGGCAAAGGAAATGTCGAAGCGCTG CTCGCTGCCCTGGCGGCCGAGCCGACGATCCCGGAGATTGCGAAGGCGATGTTCGCTGAAATGGGTCGGCACGTCGCCGA TCTTGATGCGAAGATCGTGGCAGTCGACCGACAACTCCTCGAGCAGCACAAGGGAAGTCCGGTCAGCCAGCGACTTTGGG CGATCCCCGGTGTCGGACCGATCACCGCGATCACCATGGCGCTGTCGGTCAACCCGGCGAACTTCGAGAGCGGGCGGCAT TTCGCGGCCTGGCTCGGGTTGACGCCACGGGAGCATTCCACGGGGGGCAAACATCGCCTGGGGCGGATTAGTAAAGCCGG CAATGAGAGGTTCCGACAGCTGCTAGTGGTGGGGGCAACGGCATTGATCCGCGTCGCCAAGCCAGGGCGGCGGTCGGCCA CCGCTTGGCTGCTGGGACTGCTGGAGCGCAGGCCACGGAAAGTCGCGGCGGTCGCTCTGGCCAACAAAGTCGCCCGGATC ATCTGGGCGATGATGGCGCGTGGTGAGGCTTACCGGCATCAGCCGGCCTCGGCCTGA
Upstream 100 bases:
>100_bases ACCCCTTGCGGACGGGGCGGGCCATACGTTCACTGAGGCCCGCCGGCATCGAATGTGCCAAGGTAGGGTCGAATAACCAA TCCGATGAAAGGGCCGCCAG
Downstream 100 bases:
>100_bases TCCACGCACCGGTGCCGGGGTTCAAGGGCGTTAGGAGAAGATGACGATCGGTCGATCCGACGAATGGCACACATCCAGTG CGCGACAAAGGCATCTCAAA
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MECKRISIDTSKHAFTIHAVDEKERPVLRHDLRRAQIERFFARLAPTEVALEACAGAHHWRRRLIALGHLVKLIPPQYVK PFVKRGKNDRNDAEAISEAASRPTMPLVPVKTVAEQAAAVIVKHREMLVGQRTQTINVLRGHAAEFGIVAAKGKGNVEAL LAALAAEPTIPEIAKAMFAEMGRHVADLDAKIVAVDRQLLEQHKGSPVSQRLWAIPGVGPITAITMALSVNPANFESGRH FAAWLGLTPREHSTGGKHRLGRISKAGNERFRQLLVVGATALIRVAKPGRRSATAWLLGLLERRPRKVAAVALANKVARI IWAMMARGEAYRHQPASA
Sequences:
>Translated_338_residues MECKRISIDTSKHAFTIHAVDEKERPVLRHDLRRAQIERFFARLAPTEVALEACAGAHHWRRRLIALGHLVKLIPPQYVK PFVKRGKNDRNDAEAISEAASRPTMPLVPVKTVAEQAAAVIVKHREMLVGQRTQTINVLRGHAAEFGIVAAKGKGNVEAL LAALAAEPTIPEIAKAMFAEMGRHVADLDAKIVAVDRQLLEQHKGSPVSQRLWAIPGVGPITAITMALSVNPANFESGRH FAAWLGLTPREHSTGGKHRLGRISKAGNERFRQLLVVGATALIRVAKPGRRSATAWLLGLLERRPRKVAAVALANKVARI IWAMMARGEAYRHQPASA >Mature_338_residues MECKRISIDTSKHAFTIHAVDEKERPVLRHDLRRAQIERFFARLAPTEVALEACAGAHHWRRRLIALGHLVKLIPPQYVK PFVKRGKNDRNDAEAISEAASRPTMPLVPVKTVAEQAAAVIVKHREMLVGQRTQTINVLRGHAAEFGIVAAKGKGNVEAL LAALAAEPTIPEIAKAMFAEMGRHVADLDAKIVAVDRQLLEQHKGSPVSQRLWAIPGVGPITAITMALSVNPANFESGRH FAAWLGLTPREHSTGGKHRLGRISKAGNERFRQLLVVGATALIRVAKPGRRSATAWLLGLLERRPRKVAAVALANKVARI IWAMMARGEAYRHQPASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 37056; Mature: 37056
Theoretical pI: Translated: 11.51; Mature: 11.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECKRISIDTSKHAFTIHAVDEKERPVLRHDLRRAQIERFFARLAPTEVALEACAGAHHW CCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHH RRRLIALGHLVKLIPPQYVKPFVKRGKNDRNDAEAISEAASRPTMPLVPVKTVAEQAAAV HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH IVKHREMLVGQRTQTINVLRGHAAEFGIVAAKGKGNVEALLAALAAEPTIPEIAKAMFAE HHHHHHHHHCCCHHHHHHHHCCCHHCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH MGRHVADLDAKIVAVDRQLLEQHKGSPVSQRLWAIPGVGPITAITMALSVNPANFESGRH HCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCE FAAWLGLTPREHSTGGKHRLGRISKAGNERFRQLLVVGATALIRVAKPGRRSATAWLLGL EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LERRPRKVAAVALANKVARIIWAMMARGEAYRHQPASA HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure MECKRISIDTSKHAFTIHAVDEKERPVLRHDLRRAQIERFFARLAPTEVALEACAGAHHW CCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHH RRRLIALGHLVKLIPPQYVKPFVKRGKNDRNDAEAISEAASRPTMPLVPVKTVAEQAAAV HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH IVKHREMLVGQRTQTINVLRGHAAEFGIVAAKGKGNVEALLAALAAEPTIPEIAKAMFAE HHHHHHHHHCCCHHHHHHHHCCCHHCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH MGRHVADLDAKIVAVDRQLLEQHKGSPVSQRLWAIPGVGPITAITMALSVNPANFESGRH HCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCE FAAWLGLTPREHSTGGKHRLGRISKAGNERFRQLLVVGATALIRVAKPGRRSATAWLLGL EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LERRPRKVAAVALANKVARIIWAMMARGEAYRHQPASA HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]