Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243643
Identifier: 148243643
GI number: 148243643
Start: 11140
End: 11562
Strand: Reverse
Name: 148243643
Synonym: Acry_3112
Alternate gene names: NA
Gene position: 11562-11140 (Counterclockwise)
Preceding gene: 148243644
Following gene: NA
Centisome position: 5.68
GC content: 61.47
Gene sequence:
>423_bases ATGTGCTGGGCACCGGCAGAACCGATTCGCTGGGGCGCGCCATCAGCAATGCGTACCCTCATGGCGGCAAAGCGGGCTGT CAGACGCCCCTTTGTTCCCTTGCGCCAACCGAGCTGCGCCACCGGCGGGCAGCGCGGGTTTGATGCCGGAAAGAAGATCA AGGGGCGCAAGCGCCACATCATCACCGATACAATCGGCCACCTCGTCGGCGCCGTCGTTCATCATGCCGGCATTCAGGAT CGGGATGGGGCGCCCGACGTGCTCAAATCGGTCAAATCCCTGTATCCTTGGTTGCGGCACGGATTCGCCGACGGCGGCTA TGCCGGTCCCAAACTCAATGGACACCTCGCCAAAATCGGCAAATGGATCATACAGATCGTCAAACGCTCCGACACCGCCG ACGGGTTGTTTGATCGCGACTGA
Upstream 100 bases:
>100_bases CAGAGCTCTGATCGGGGTGTCGGCAGGCAGGTTCGAGAGATAATATTTTCGTTCGCCATTCGAGCGATGCTCACCCACCA GCCAGGCTTCCTCTCCCGGC
Downstream 100 bases:
>100_bases CCTGTCAACTCCTTTCTTGCAGCTTGCTGCATCATCGCCGGATCTTGGTTGTTTCCGGGGTCGACCCTCGTTGGTCGCCG CAACATGCTTTTCGAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; IS4 Insertion Sequence Transposase Protein; Transposase IS5 Family Protein; IS4 Family Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; IS4 Family Transposase; Insertion Sequence Transposase Truncated Protein; Transposase Protein
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MCWAPAEPIRWGAPSAMRTLMAAKRAVRRPFVPLRQPSCATGGQRGFDAGKKIKGRKRHIITDTIGHLVGAVVHHAGIQD RDGAPDVLKSVKSLYPWLRHGFADGGYAGPKLNGHLAKIGKWIIQIVKRSDTADGLFDRD
Sequences:
>Translated_140_residues MCWAPAEPIRWGAPSAMRTLMAAKRAVRRPFVPLRQPSCATGGQRGFDAGKKIKGRKRHIITDTIGHLVGAVVHHAGIQD RDGAPDVLKSVKSLYPWLRHGFADGGYAGPKLNGHLAKIGKWIIQIVKRSDTADGLFDRD >Mature_140_residues MCWAPAEPIRWGAPSAMRTLMAAKRAVRRPFVPLRQPSCATGGQRGFDAGKKIKGRKRHIITDTIGHLVGAVVHHAGIQD RDGAPDVLKSVKSLYPWLRHGFADGGYAGPKLNGHLAKIGKWIIQIVKRSDTADGLFDRD
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15313; Mature: 15313
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCWAPAEPIRWGAPSAMRTLMAAKRAVRRPFVPLRQPSCATGGQRGFDAGKKIKGRKRHI CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH ITDTIGHLVGAVVHHAGIQDRDGAPDVLKSVKSLYPWLRHGFADGGYAGPKLNGHLAKIG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH KWIIQIVKRSDTADGLFDRD HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MCWAPAEPIRWGAPSAMRTLMAAKRAVRRPFVPLRQPSCATGGQRGFDAGKKIKGRKRHI CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH ITDTIGHLVGAVVHHAGIQDRDGAPDVLKSVKSLYPWLRHGFADGGYAGPKLNGHLAKIG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH KWIIQIVKRSDTADGLFDRD HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA