Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
---|---|
Accession | NC_009457 |
Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147675579
Identifier: 147675579
GI number: 147675579
Start: 2067476
End: 2068117
Strand: Reverse
Name: 147675579
Synonym: VC0395_A1937
Alternate gene names: NA
Gene position: 2068117-2067476 (Counterclockwise)
Preceding gene: 147675455
Following gene: 147674420
Centisome position: 68.39
GC content: 42.68
Gene sequence:
>642_bases ATGCAATTGGCGTTTTTTCGACCAGTTTCAAAGCCGATATATCAATCCTTATGTACACTTTACCTTAGTACAAGTATGGA GATTGATAAGATGATGATGGAACGAATCCGCCGCGAGCACAGTTATATGGTGCGTTTGTTGTCGATTTTACGCCACAAAT TGGATCTGGTGAAAAGCGAGCAACCGATCAACTACAGCCTTCTGAAAGAAATCGTTGATTATTTAGCAAGCCATTCAGAG AAAGTGCATCACCCGAAAGAGGACATTCTGTACCGCCACTACATGGCACATTACGGCGATGAACAGCAAGTGGCTAATTT GGAGCGTGAACATCAAGAGTTGGCGCAAATTACCCATCAGTTTCTCGATGTCATGGAGATGATTTTAAACGATGCGGTTG TGCCACAAGATGTGTTTATTGAGCAACTGGAGGCCTTTCTACAAGGTCAAAAACAGCATTTAGAGTTGGAAGAACAATCG ATTTTGCCATTGATTAATCAAACGTTTGAATTAGAAGATTGGCAGAACGTTGAGTCGCAATGGCAAAACAACGATGATGA TCCGGTATTCGGTGAAACGATCGCTGAGCGATATGCGCTTTTGGCTCGCCGTGTTCGTAAAAGTGAGAGTGAATACACCT AA
Upstream 100 bases:
>100_bases ACAGGGGCTTTTTAGGATGTCGGCATTTCTCTAAAACCAATCAATTGCTGCAAGCGCAAGGTATCGCTCCCATTAACTGG CAGCCCGAGCTCGAATCTTA
Downstream 100 bases:
>100_bases CCAATCAAAGGTATACCATGCAGGATTGCTTCAGTTTCACATGACACTGCGTTGTCTAGAGAAGCTTGCTGTGGATAGCC GTTCTCACTTAAAGTCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Hemerythrin Family Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQLAFFRPVSKPIYQSLCTLYLSTSMEIDKMMMERIRREHSYMVRLLSILRHKLDLVKSEQPINYSLLKEIVDYLASHSE KVHHPKEDILYRHYMAHYGDEQQVANLEREHQELAQITHQFLDVMEMILNDAVVPQDVFIEQLEAFLQGQKQHLELEEQS ILPLINQTFELEDWQNVESQWQNNDDDPVFGETIAERYALLARRVRKSESEYT
Sequences:
>Translated_213_residues MQLAFFRPVSKPIYQSLCTLYLSTSMEIDKMMMERIRREHSYMVRLLSILRHKLDLVKSEQPINYSLLKEIVDYLASHSE KVHHPKEDILYRHYMAHYGDEQQVANLEREHQELAQITHQFLDVMEMILNDAVVPQDVFIEQLEAFLQGQKQHLELEEQS ILPLINQTFELEDWQNVESQWQNNDDDPVFGETIAERYALLARRVRKSESEYT >Mature_213_residues MQLAFFRPVSKPIYQSLCTLYLSTSMEIDKMMMERIRREHSYMVRLLSILRHKLDLVKSEQPINYSLLKEIVDYLASHSE KVHHPKEDILYRHYMAHYGDEQQVANLEREHQELAQITHQFLDVMEMILNDAVVPQDVFIEQLEAFLQGQKQHLELEEQS ILPLINQTFELEDWQNVESQWQNNDDDPVFGETIAERYALLARRVRKSESEYT
Specific function: Unknown
COG id: COG3945
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25410; Mature: 25410
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLAFFRPVSKPIYQSLCTLYLSTSMEIDKMMMERIRREHSYMVRLLSILRHKLDLVKSE CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPINYSLLKEIVDYLASHSEKVHHPKEDILYRHYMAHYGDEQQVANLEREHQELAQITHQ CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FLDVMEMILNDAVVPQDVFIEQLEAFLQGQKQHLELEEQSILPLINQTFELEDWQNVESQ HHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH WQNNDDDPVFGETIAERYALLARRVRKSESEYT HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQLAFFRPVSKPIYQSLCTLYLSTSMEIDKMMMERIRREHSYMVRLLSILRHKLDLVKSE CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPINYSLLKEIVDYLASHSEKVHHPKEDILYRHYMAHYGDEQQVANLEREHQELAQITHQ CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FLDVMEMILNDAVVPQDVFIEQLEAFLQGQKQHLELEEQSILPLINQTFELEDWQNVESQ HHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH WQNNDDDPVFGETIAERYALLARRVRKSESEYT HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA