Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
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Accession | NC_009457 |
Length | 3,024,069 |
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The map label for this gene is 147675044
Identifier: 147675044
GI number: 147675044
Start: 2010269
End: 2010850
Strand: Reverse
Name: 147675044
Synonym: VC0395_A1892
Alternate gene names: NA
Gene position: 2010850-2010269 (Counterclockwise)
Preceding gene: 147674303
Following gene: 147673682
Centisome position: 66.49
GC content: 45.02
Gene sequence:
>582_bases ATGGAAGAGATAATGTTGTTTCCACTTAGCTCCGTCGTACTTCCTGAAGGGAAAATGAAGCTGCGAATTTTTGAACCGCG CTATCAGCGTATGGTCGCTCAGTGCAGTAAAACGGGCAGTGGATTTGGTCTCTGTTTGTTCGATAGTAAGTCGAATAAAA ATGCAAACGAATTATCTGAGTTTGGGACTTTAGTCAAAATCGTTGATTTTGAAACGTTAAGTGATGGTTTGCTTGGGATC ACAGTCGTCGGTATACGACGTTTTGCGATTCGCAAAGTTCGGGTTGAATATGACGGTTTGCGGATTGCTACAGTACAGTG GTTTCCGGATTGGCCAAGCCAAGAATTGTTAGAGCGGGAGCGCTTTTTAGGCGAGCAATTGCAGGAAGTCTATCGGCAAT TTCCACAAATTGGTGAGTTGCACAGTTTGTGCTTTTTTGATGATGCGAGCTGGGTCTGTCAACGTTGGCTAGAACTGCTA CCTTTAAGCAAAGGACAGTTTGATGTGCTGGTTGGGCAGCGAGATTGCCATGCAGCTTTAGCTTTTTTACAGCGTACCAT TGAGTCGCATCTCGACACGTGA
Upstream 100 bases:
>100_bases CTAAACTTATACGCTAATCGATAAACCAACAAATTCAGTGAGTGATCGACGAATGAACTCTTTTCGTATACCTAAGTAAA TTTATGAAAAGGAGTGAGTA
Downstream 100 bases:
>100_bases ACAATTTGCTTGTGGCGAATGATCTCAAGTGGTAACACTGACGTATAGGCTTACTAGGGTGTTCGCCTGAGTCATTAAGG ATGAGTTTATATGTTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain-Containing Protein; ATP-Dependent Protease La Domain Protein; Protease; ATP-Dependent Endopeptidase Lon; Peptidase S
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MEEIMLFPLSSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSEFGTLVKIVDFETLSDGLLGI TVVGIRRFAIRKVRVEYDGLRIATVQWFPDWPSQELLERERFLGEQLQEVYRQFPQIGELHSLCFFDDASWVCQRWLELL PLSKGQFDVLVGQRDCHAALAFLQRTIESHLDT
Sequences:
>Translated_193_residues MEEIMLFPLSSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSEFGTLVKIVDFETLSDGLLGI TVVGIRRFAIRKVRVEYDGLRIATVQWFPDWPSQELLERERFLGEQLQEVYRQFPQIGELHSLCFFDDASWVCQRWLELL PLSKGQFDVLVGQRDCHAALAFLQRTIESHLDT >Mature_193_residues MEEIMLFPLSSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSEFGTLVKIVDFETLSDGLLGI TVVGIRRFAIRKVRVEYDGLRIATVQWFPDWPSQELLERERFLGEQLQEVYRQFPQIGELHSLCFFDDASWVCQRWLELL PLSKGQFDVLVGQRDCHAALAFLQRTIESHLDT
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22252; Mature: 22252
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIMLFPLSSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSE CCCEEEECCCCEECCCCCEEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH FGTLVKIVDFETLSDGLLGITVVGIRRFAIRKVRVEYDGLRIATVQWFPDWPSQELLERE HHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCCCHHHHHHHH RFLGEQLQEVYRQFPQIGELHSLCFFDDASWVCQRWLELLPLSKGQFDVLVGQRDCHAAL HHHHHHHHHHHHHCCCHHHHHHHHEECCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH AFLQRTIESHLDT HHHHHHHHHHCCC >Mature Secondary Structure MEEIMLFPLSSVVLPEGKMKLRIFEPRYQRMVAQCSKTGSGFGLCLFDSKSNKNANELSE CCCEEEECCCCEECCCCCEEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH FGTLVKIVDFETLSDGLLGITVVGIRRFAIRKVRVEYDGLRIATVQWFPDWPSQELLERE HHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCCCHHHHHHHH RFLGEQLQEVYRQFPQIGELHSLCFFDDASWVCQRWLELLPLSKGQFDVLVGQRDCHAAL HHHHHHHHHHHHHCCCHHHHHHHHEECCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH AFLQRTIESHLDT HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA