| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is citX
Identifier: 147674374
GI number: 147674374
Start: 347715
End: 348251
Strand: Direct
Name: citX
Synonym: VC0395_A0327
Alternate gene names: 147674374
Gene position: 347715-348251 (Clockwise)
Preceding gene: 147674991
Following gene: 147675109
Centisome position: 11.5
GC content: 53.63
Gene sequence:
>537_bases ATGAGTCACCATCCGGATCTTTCAGTCAGTCTGGACCAGCTCCTTCTGCGTAAAGAAGTGCGGGTTCGGCAACAAGGTGA GTGGCTAAAGCGCCATTCACTGCCTCTGGTTTCTTTCACGGTTAACATGCCGGGCGCGTTTAAGCTCAACGCTGCCAGCC AAACCGTGATGGATGCAGGTATGCGTGCCATTCAAGAGCTCTGTCAGAAAACGGGCTGGCGGCAAGTGGCTTGTCAGTTG TTGGTGGAAAAAACCGGACCGGAAGCCTTTGTGGTAATTCAGGCTCCATCGGCCAGCATGTTGAAAAAAGCCATGATGAA GATTGAACGCGAGCACCCGCTGGGGCGACTGATGGATCTGGATGTAATTGATGTCGATGGACATATTATTTCGCGCCAAG GTGCGCAGTTGCCAAGACGGCGCTGCCTGCTGTGTGAACGCGATGCGGTGATCTGTGCTCGCTCACGGCGGCACAGTGTC GAAGCTTTGCTGGCAAAAATTGAGGAGATGACGCATGACTATTCCTGCTGCGCTTGA
Upstream 100 bases:
>100_bases CGGGCAAACCCCAGCCGTTGCAATTTGAAGACAAAACCGTTGCCTTTGTTCACTACCGTGACGGTTCGATCATTGATGTT ATCAAACAGGTAAAAAGCCT
Downstream 100 bases:
>100_bases TCTGCTGCTTGAACTGCCTAGCCAAGCGTCTTCCTCTTCAGGTTCAAGGACCTTCAGCTTGCCCCGCTTAGTGGGGCATC TGGCCTACCATGCCATGATG
Product: apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
Products: NA
Alternate protein names: Apo-ACP nucleodityltransferase; Holo-ACP synthase; Holo-citrate lyase synthase
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAFKLNAASQTVMDAGMRAIQELCQKTGWRQVACQL LVEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDLDVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSV EALLAKIEEMTHDYSCCA
Sequences:
>Translated_178_residues MSHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAFKLNAASQTVMDAGMRAIQELCQKTGWRQVACQL LVEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDLDVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSV EALLAKIEEMTHDYSCCA >Mature_177_residues SHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAFKLNAASQTVMDAGMRAIQELCQKTGWRQVACQLL VEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDLDVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSVE ALLAKIEEMTHDYSCCA
Specific function: Transfers 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A on a serine residue to the apo-acyl carrier protein (gamma chain) of the citrate lyase to yield holo-acyl carrier protein
COG id: COG3697
COG function: function code HI; Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitX family
Homologues:
Organism=Escherichia coli, GI1786831, Length=176, Percent_Identity=42.6136363636364, Blast_Score=144, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CITX_VIBC3 (A5F3C5)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - STRING: A5F3C5 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0327 - eggNOG: COG3697 - HOGENOM: HBG698187 - OMA: TGYEYYL - ProtClustDB: CLSK793782 - BioCyc: VCHO345073:VC0395_A0327-MONOMER - HAMAP: MF_00398 - InterPro: IPR005551 - TIGRFAMs: TIGR03124
Pfam domain/function: PF03802 CitX
EC number: =2.7.7.61
Molecular weight: Translated: 20098; Mature: 19967
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAFKLNAASQTVMDAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHH MRAIQELCQKTGWRQVACQLLVEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDL HHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHCCC DVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSVEALLAKIEEMTHDYSCCA EEEECCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SHHPDLSVSLDQLLLRKEVRVRQQGEWLKRHSLPLVSFTVNMPGAFKLNAASQTVMDAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHH MRAIQELCQKTGWRQVACQLLVEKTGPEAFVVIQAPSASMLKKAMMKIEREHPLGRLMDL HHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHCCC DVIDVDGHIISRQGAQLPRRRCLLCERDAVICARSRRHSVEALLAKIEEMTHDYSCCA EEEECCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA