| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is pstA-1 [H]
Identifier: 147674308
GI number: 147674308
Start: 272023
End: 273669
Strand: Direct
Name: pstA-1 [H]
Synonym: VC0395_A0259
Alternate gene names: 147674308
Gene position: 272023-273669 (Clockwise)
Preceding gene: 147675548
Following gene: 147673468
Centisome position: 9.0
GC content: 49.42
Gene sequence:
>1647_bases ATGTTGAATTGGTTTAAATCCGGTGCTCCGTGGATCTGGCTGACAGGAGGAGCCGTCAGCGTCAGCTTGATTGCTGTACT TGGCCTATTACTGGTGATTGGTTGGCGTGGCTTAACCTATTTCTGGCCAGCGCCCTTGCTGCAATGGCAAACCCCCGATG GAAAAAACGTGGTGGGTCAACTGTACGCTCGTGAAAGTGTGCCGGTTAGCCATTTAAAAGAGATGAATTTACCGCTACCA GAAAAAGTGCAAGCGGCAGGGTTGGCGACACGGCTCAATATCAAAGTCGCTAATCGGGATCTGTATGGATCTGATTTTAT TGCTTTACTTGAGTTTGAAACCGAATTTAAAGGCGCGCCACAAGGTTGGGCGGTGATTGAGCGCAGCCGAGGTGGGCAAC TGTTTGGTAAACCGCTTCGCTTCGATTCTACGATTGGCGAGCTGGATCTGCCGCTAGAGCGCCATCTGCGTCAAGCATTG TTAGAGGCTGAAGCCATTCGCGATCAAGTGGATACGATGGTTGAACAGCAAGTGCGGGTGATCAGTAGCCAGCTAGAAAA ATTACGTTTGGAAAAACGCCGTAAGCAATTGAATAACCAGCTCAGTGATGAGTTTTTACAACACTACGTGTTAAGCAAAA GCCGTTTAGAGAAAGAGCTTGCACTGGTTCAAACTGAGTTAGATGCGCTCCGAGCACCGTTAGAAAAGCAGTTTTTATAT CTTGTGGATATGCAAGGAGAGACCGTCTCCGTCCCGCTGAGTGAAATCTTGGATTTTTGGTATCCCAATGATATGAATTT TTCCCAAAAACTCGCGGAGTGGGGCAAGCAAGCATGGCGCTTTTTATCGGAATCACCACGGGAGTCAAACTCGGAAGGGG GCGTGTTTCCGGCCATTTTTGGAACGGTGTTTCTGGTGATCATCATGTCGATCATCGTCATGCCTTTAGGCGTGATAGCA GCTATCTATCTGCATGAATACGCGCAAGAGGGCGCATTTACTCGGATGATTCGAGTCGCGGTGATCAACTTAGCGGGGGT ACCTTCCATCGTATATGGGGTGTTTGGCCTCGGCTTTTTTGTTTACACCATAGGCGCTTCGGTTGATAACCTTTTTTATG CTGAGCGTTTGCCCACTCCGACCTTCGGGACGCCTGGGTTGCTGTGGTCTGCTCTGACATTAGCCGTGTTGACGCTGCCT GTGGTGATTGTGGCGACGGAAGAAGGGCTCTCGCGTATTCCGATTTCGGTGCGCCATGGATCATTAGCACTAGGCGCTAC CCAGTTTGAAACCATTTGGCGTATTGTGCTACCGATGGCAAGCCCTGCGATCATCACCGGATTGATTTTGGCGATCGCCC GCGCAGCCGGTGAAGTGGCTCCGCTGATGCTGGTCGGTGCGGTGAAACTGGCTTCCAGTTTGCCTGTGGATGGGGAATTT CCCTTCATCCATCTTGAACGCAAATTTATGCATTTAGGTTTCCACATTTACGATATCGGTTTTCAAACCAACAATATTGA AGCGGCACGGCCACTGGTGTATGCCACTTCATTTTTATTGGTCACTGTGATTGTGGCGCTCAACTTAACTGCGATCAGCA TTCGTAATAACTTACGCGAAAAATACCGAACCTTGGGGCAAGACTAG
Upstream 100 bases:
>100_bases CGCACTGCTGCTGCTGACCTTTACGTTTGCGGTGAATTCCCTAGCGGAATGGGTACGCCAACGGCTACGAGAAAAATACC GTTCTTTATGATGGAGCAAT
Downstream 100 bases:
>100_bases TTATGTACTCCGCCAATCCTACTTTGGGCTATTATGTGCCGCCGCTGGACGTGAATAATCTTACCGATCAGCAGACGGCG ATTTCGATTGAGCACTTAAG
Product: phosphate ABC transporter, permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MLNWFKSGAPWIWLTGGAVSVSLIAVLGLLLVIGWRGLTYFWPAPLLQWQTPDGKNVVGQLYARESVPVSHLKEMNLPLP EKVQAAGLATRLNIKVANRDLYGSDFIALLEFETEFKGAPQGWAVIERSRGGQLFGKPLRFDSTIGELDLPLERHLRQAL LEAEAIRDQVDTMVEQQVRVISSQLEKLRLEKRRKQLNNQLSDEFLQHYVLSKSRLEKELALVQTELDALRAPLEKQFLY LVDMQGETVSVPLSEILDFWYPNDMNFSQKLAEWGKQAWRFLSESPRESNSEGGVFPAIFGTVFLVIIMSIIVMPLGVIA AIYLHEYAQEGAFTRMIRVAVINLAGVPSIVYGVFGLGFFVYTIGASVDNLFYAERLPTPTFGTPGLLWSALTLAVLTLP VVIVATEEGLSRIPISVRHGSLALGATQFETIWRIVLPMASPAIITGLILAIARAAGEVAPLMLVGAVKLASSLPVDGEF PFIHLERKFMHLGFHIYDIGFQTNNIEAARPLVYATSFLLVTVIVALNLTAISIRNNLREKYRTLGQD
Sequences:
>Translated_548_residues MLNWFKSGAPWIWLTGGAVSVSLIAVLGLLLVIGWRGLTYFWPAPLLQWQTPDGKNVVGQLYARESVPVSHLKEMNLPLP EKVQAAGLATRLNIKVANRDLYGSDFIALLEFETEFKGAPQGWAVIERSRGGQLFGKPLRFDSTIGELDLPLERHLRQAL LEAEAIRDQVDTMVEQQVRVISSQLEKLRLEKRRKQLNNQLSDEFLQHYVLSKSRLEKELALVQTELDALRAPLEKQFLY LVDMQGETVSVPLSEILDFWYPNDMNFSQKLAEWGKQAWRFLSESPRESNSEGGVFPAIFGTVFLVIIMSIIVMPLGVIA AIYLHEYAQEGAFTRMIRVAVINLAGVPSIVYGVFGLGFFVYTIGASVDNLFYAERLPTPTFGTPGLLWSALTLAVLTLP VVIVATEEGLSRIPISVRHGSLALGATQFETIWRIVLPMASPAIITGLILAIARAAGEVAPLMLVGAVKLASSLPVDGEF PFIHLERKFMHLGFHIYDIGFQTNNIEAARPLVYATSFLLVTVIVALNLTAISIRNNLREKYRTLGQD >Mature_548_residues MLNWFKSGAPWIWLTGGAVSVSLIAVLGLLLVIGWRGLTYFWPAPLLQWQTPDGKNVVGQLYARESVPVSHLKEMNLPLP EKVQAAGLATRLNIKVANRDLYGSDFIALLEFETEFKGAPQGWAVIERSRGGQLFGKPLRFDSTIGELDLPLERHLRQAL LEAEAIRDQVDTMVEQQVRVISSQLEKLRLEKRRKQLNNQLSDEFLQHYVLSKSRLEKELALVQTELDALRAPLEKQFLY LVDMQGETVSVPLSEILDFWYPNDMNFSQKLAEWGKQAWRFLSESPRESNSEGGVFPAIFGTVFLVIIMSIIVMPLGVIA AIYLHEYAQEGAFTRMIRVAVINLAGVPSIVYGVFGLGFFVYTIGASVDNLFYAERLPTPTFGTPGLLWSALTLAVLTLP VVIVATEEGLSRIPISVRHGSLALGATQFETIWRIVLPMASPAIITGLILAIARAAGEVAPLMLVGAVKLASSLPVDGEF PFIHLERKFMHLGFHIYDIGFQTNNIEAARPLVYATSFLLVTVIVALNLTAISIRNNLREKYRTLGQD
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4985
COG function: function code P; ABC-type phosphate transport system, auxiliary component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=183, Percent_Identity=34.9726775956284, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790164, Length=178, Percent_Identity=31.4606741573034, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 60970; Mature: 60970
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNWFKSGAPWIWLTGGAVSVSLIAVLGLLLVIGWRGLTYFWPAPLLQWQTPDGKNVVGQ CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHH LYARESVPVSHLKEMNLPLPEKVQAAGLATRLNIKVANRDLYGSDFIALLEFETEFKGAP HHHCCCCCHHHHHHCCCCCCHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEECHHCCCCC QGWAVIERSRGGQLFGKPLRFDSTIGELDLPLERHLRQALLEAEAIRDQVDTMVEQQVRV CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSQLEKLRLEKRRKQLNNQLSDEFLQHYVLSKSRLEKELALVQTELDALRAPLEKQFLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEE LVDMQGETVSVPLSEILDFWYPNDMNFSQKLAEWGKQAWRFLSESPRESNSEGGVFPAIF EEECCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH GTVFLVIIMSIIVMPLGVIAAIYLHEYAQEGAFTRMIRVAVINLAGVPSIVYGVFGLGFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VYTIGASVDNLFYAERLPTPTFGTPGLLWSALTLAVLTLPVVIVATEEGLSRIPISVRHG HHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEECC SLALGATQFETIWRIVLPMASPAIITGLILAIARAAGEVAPLMLVGAVKLASSLPVDGEF CEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC PFIHLERKFMHLGFHIYDIGFQTNNIEAARPLVYATSFLLVTVIVALNLTAISIRNNLRE CEEEHHHHHHHCCEEEEEECEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYRTLGQD HHHHCCCC >Mature Secondary Structure MLNWFKSGAPWIWLTGGAVSVSLIAVLGLLLVIGWRGLTYFWPAPLLQWQTPDGKNVVGQ CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHH LYARESVPVSHLKEMNLPLPEKVQAAGLATRLNIKVANRDLYGSDFIALLEFETEFKGAP HHHCCCCCHHHHHHCCCCCCHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEECHHCCCCC QGWAVIERSRGGQLFGKPLRFDSTIGELDLPLERHLRQALLEAEAIRDQVDTMVEQQVRV CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSQLEKLRLEKRRKQLNNQLSDEFLQHYVLSKSRLEKELALVQTELDALRAPLEKQFLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEE LVDMQGETVSVPLSEILDFWYPNDMNFSQKLAEWGKQAWRFLSESPRESNSEGGVFPAIF EEECCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH GTVFLVIIMSIIVMPLGVIAAIYLHEYAQEGAFTRMIRVAVINLAGVPSIVYGVFGLGFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VYTIGASVDNLFYAERLPTPTFGTPGLLWSALTLAVLTLPVVIVATEEGLSRIPISVRHG HHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEECC SLALGATQFETIWRIVLPMASPAIITGLILAIARAAGEVAPLMLVGAVKLASSLPVDGEF CEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC PFIHLERKFMHLGFHIYDIGFQTNNIEAARPLVYATSFLLVTVIVALNLTAISIRNNLRE CEEEHHHHHHHCCEEEEEECEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYRTLGQD HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]