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The map label for this gene is secF [H]

Identifier: 147673073

GI number: 147673073

Start: 288417

End: 289364

Strand: Direct

Name: secF [H]

Synonym: VC0395_A0273

Alternate gene names: 147673073

Gene position: 288417-289364 (Clockwise)

Preceding gene: 147675510

Following gene: 147675237

Centisome position: 9.54

GC content: 49.37

Gene sequence:

>948_bases
ATGTTTCAAATCCTAAAAGCAGACAAAATGATCGACTTTATGCGTTGGTCGAAATTCGCCTTCGCCTTGTCGCTGGTGAT
GATTGCCGCATCGATTTTTACTCTGTCTACCAAATGGCTGAACTGGGGGCTGGATTTCACGGGCGGTACATTGATTGAAG
TGGGCTTTGAGCAGCCTGCCAATCTGGAGCAAATCCGTAGCGCCCTTGAAGCGAAAGGTTTTGGTGATGCTACCGTGCAA
AACTTTGGTTCTGCACGTGATGTAATGGTACGTCTACGTCCTCGTGATGATATGGCGGGTGAGGCGTTGGGTAACCAGAT
CCTCGCGGCGATCAAAGAAGGTACCGGCGGCAACGTGGAAATGCGCCGTATCGAATTCGTTGGCCCGAACGTGGGTGATG
AGCTCACTGAAGCGGGCGGCTTGGCGATTCTGGTTTCTTTGCTGTGTATCTTGCTTTACGTGTCAGTACGCTTTGAATGG
CGTTTGGCTGCAGGTGCGGTGCTGGCATTGGCGCACGACGTCATCATTACTTTAGGCATCTTCTCTATCTTACAGATTGA
AGTTGATCTCACGATTGTTGCAGCATTGCTGACGGTTGTGGGTTACTCACTCAACGATACCATCGTGGTGTTTGACCGGA
TCCGTGAAAACTTCCGTAAGATGCGCAAAGAAGAACCCGCAGAGATCATGAATAGCTCAATTACACAAACTTTGAGCCGT
ACTTTGATCACTTCAGGTACCACTTTGTTTGTGGTGATTGCCCTCTTTACTCAAGGTGGAGCAATGATCCACGGTTTTGC
GCTGGCCTTGTTGCTGGGTATTACCGTTGGTACTTATTCTTCTATCTATGTGGCATCAGCACTGGCGCTGAAACTCGGGA
TCACCCGTGAGCACTTATTGCCTCCACAAGTAGAGAAAGAAGGCGCAGAGTTGGATGAAATGCCGTAG

Upstream 100 bases:

>100_bases
CCTCTATGTTTACCGCGATTGTGGGTACACGTTGTATCGTGAACCTGCTGTATGGCGGCAAACGTATCAACAAATTGTCG
ATCTGAGGCTGGGGTAAGTT

Downstream 100 bases:

>100_bases
GCATCTCTTTCATCGATAAATAAAAAAACCGCTGCTAAGTCAGCGGTTTTTTTATCAAGCTTGGTTAGCTATGACCTGAT
TGATCATGAAGCAGTAGGCG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MFQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSALEAKGFGDATVQ
NFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEW
RLAAGAVLALAHDVIITLGIFSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSR
TLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPPQVEKEGAELDEMP

Sequences:

>Translated_315_residues
MFQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSALEAKGFGDATVQ
NFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEW
RLAAGAVLALAHDVIITLGIFSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSR
TLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPPQVEKEGAELDEMP
>Mature_315_residues
MFQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSALEAKGFGDATVQ
NFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEW
RLAAGAVLALAHDVIITLGIFSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSR
TLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPPQVEKEGAELDEMP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=309, Percent_Identity=56.6343042071197, Blast_Score=367, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34330; Mature: 34330

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
NLEQIRSALEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVE
CHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEE
MRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGI
EEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
FSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSR
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLL
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHCC
PPQVEKEGAELDEMP
CCCHHHCCCCCCCCC
>Mature Secondary Structure
MFQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
NLEQIRSALEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVE
CHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEE
MRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGI
EEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
FSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSR
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLL
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHCC
PPQVEKEGAELDEMP
CCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]