Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
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Accession | NC_009457 |
Length | 3,024,069 |
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The map label for this gene is 147673068
Identifier: 147673068
GI number: 147673068
Start: 2033375
End: 2034619
Strand: Reverse
Name: 147673068
Synonym: VC0395_A1910
Alternate gene names: NA
Gene position: 2034619-2033375 (Counterclockwise)
Preceding gene: 147675158
Following gene: 147675376
Centisome position: 67.28
GC content: 51.65
Gene sequence:
>1245_bases TTGGCTTGGTTTGTGCTCATCACTGGTTCGGTCTGTGATGAAGTCGGCGAAGGAGCCAAAGTGATCAACATTATCGATAA ACGTGTCGAAGAGCGTATTCCTGCCGTACTGCGGTTGGGATTTCGTCCTTTCTTCTTACTTGGCAGTGTTTATGCCGTGG TGGCGATTGTGGCTTGGGTGTGGATGTTTCAAACCGGACAACCGCCACGCTTGCAAGTCCCCGCGCTGTGGTGGCATGTG CATGAAATGCTGTTTGGTTTTGCGATGGCGATTGTGGCCGGATTTCTGCTCACGGCGGTGCAAAACTGGACGGGCATTAC TGGCACGAAAAGTCACCGTTTAGCTCTCATTGTGGCTTTGTGGCTAATGGTGCGGATTCTGTTTTGGTTACCTGTGCCGC TCTGGTTAACGTCGAGTATTGAAGCGCTATTTCTTCTGGCGGTGGCCTATGAAGTGGGGTTACGGGTGGTAAAAGCCAAA GGTTGGCGCAACCTATTTTTTATCCCTCTGTTTCTGTTGGCGATTGCCGCTAACTTTGCCAGCTACGCCACCATTAAAGG CATGCCGCCATTCCCGAGCAGTGCGGTGTGGCAAGCCATGCTGTGGTGGTTTATGTTGCTGCTTTCGGTGATGGGCGGGC GAGTGATTCCGTTTTTTACTGCAAGACGCTTTCAATTTACCAAAGCGGAGCCGATTTTGGCTTTGGATGTGATCGCAAAC GGTAGCTTACTGGCGCTGTTTGTACTTAGTTTCTTCCCATTGACCACGGCACAACTCGGCCAGCCTTTGATGCTGTTAGC TGGCGTCGCGCAATTGATCCGCTTTTTACGTTGGCAGTCTTGGCGTACAGTGAGTGAGCCTTTAGTCTGGTCACTGCATG CTGCCTATCTGTGTATCCCGCTGAGTTTGCTGCTGCGCGGGGGAGTGAATAACGCTTGGCTGAACCACAACTTACTGCAT TTATTTGCGATTGGTGCGCTCTCTGGCCTAGTTTTAAGCATGATTGCGCGTGTCACTATGGGGCATACGGGACGAGCGAT TTATCAAGGCCCTAACATGCAATGGGCATTTATCGCTTTGTTGCTTGCTGCACTTGTGCGCAGTTTCGGTGTGGGTTTGC TGCCGCAGCAGTTGCTGATTTGGGTGAACCTGAGCGCTGCGCTGTGGGTGATTGCGTTTGCACTGTTTGTGCTGCGCTTT GGCGCAATGTTGCTAAAACCAAGAGTGGATGGTCATCCCGGTTAA
Upstream 100 bases:
>100_bases TTTGAGTGAAACACACATCAAAAAGTCATAATGACTCGATTTTTCGGTGTCATTATGACTTTTCCTTTTTCTAGTCTATT GATTTTAAATATGAATTATC
Downstream 100 bases:
>100_bases GCGTATTGAAATGCAAGATTTGAGATAAAAAAATGGCTTGGAAATTCAAGCCATTTTTCTTGCATCACGAACGTATCAAG ATCAGTTGTTCTTGTGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Protein Involved In Response NO; Heme-Cu Protein NnrS; NnrS Transmembrane Protein; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Nitrite And/Or Nitric Oxide Reductase; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; Heme-Cu Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; ATP Synthase F0 A Subunit; Integral Inner Membrane Permease; NnrS Protein Superfamily; Asparagine Synthetase
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MAWFVLITGSVCDEVGEGAKVINIIDKRVEERIPAVLRLGFRPFFLLGSVYAVVAIVAWVWMFQTGQPPRLQVPALWWHV HEMLFGFAMAIVAGFLLTAVQNWTGITGTKSHRLALIVALWLMVRILFWLPVPLWLTSSIEALFLLAVAYEVGLRVVKAK GWRNLFFIPLFLLAIAANFASYATIKGMPPFPSSAVWQAMLWWFMLLLSVMGGRVIPFFTARRFQFTKAEPILALDVIAN GSLLALFVLSFFPLTTAQLGQPLMLLAGVAQLIRFLRWQSWRTVSEPLVWSLHAAYLCIPLSLLLRGGVNNAWLNHNLLH LFAIGALSGLVLSMIARVTMGHTGRAIYQGPNMQWAFIALLLAALVRSFGVGLLPQQLLIWVNLSAALWVIAFALFVLRF GAMLLKPRVDGHPG
Sequences:
>Translated_414_residues MAWFVLITGSVCDEVGEGAKVINIIDKRVEERIPAVLRLGFRPFFLLGSVYAVVAIVAWVWMFQTGQPPRLQVPALWWHV HEMLFGFAMAIVAGFLLTAVQNWTGITGTKSHRLALIVALWLMVRILFWLPVPLWLTSSIEALFLLAVAYEVGLRVVKAK GWRNLFFIPLFLLAIAANFASYATIKGMPPFPSSAVWQAMLWWFMLLLSVMGGRVIPFFTARRFQFTKAEPILALDVIAN GSLLALFVLSFFPLTTAQLGQPLMLLAGVAQLIRFLRWQSWRTVSEPLVWSLHAAYLCIPLSLLLRGGVNNAWLNHNLLH LFAIGALSGLVLSMIARVTMGHTGRAIYQGPNMQWAFIALLLAALVRSFGVGLLPQQLLIWVNLSAALWVIAFALFVLRF GAMLLKPRVDGHPG >Mature_413_residues AWFVLITGSVCDEVGEGAKVINIIDKRVEERIPAVLRLGFRPFFLLGSVYAVVAIVAWVWMFQTGQPPRLQVPALWWHVH EMLFGFAMAIVAGFLLTAVQNWTGITGTKSHRLALIVALWLMVRILFWLPVPLWLTSSIEALFLLAVAYEVGLRVVKAKG WRNLFFIPLFLLAIAANFASYATIKGMPPFPSSAVWQAMLWWFMLLLSVMGGRVIPFFTARRFQFTKAEPILALDVIANG SLLALFVLSFFPLTTAQLGQPLMLLAGVAQLIRFLRWQSWRTVSEPLVWSLHAAYLCIPLSLLLRGGVNNAWLNHNLLHL FAIGALSGLVLSMIARVTMGHTGRAIYQGPNMQWAFIALLLAALVRSFGVGLLPQQLLIWVNLSAALWVIAFALFVLRFG AMLLKPRVDGHPG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46154; Mature: 46023
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWFVLITGSVCDEVGEGAKVINIIDKRVEERIPAVLRLGFRPFFLLGSVYAVVAIVAWV CEEEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH WMFQTGQPPRLQVPALWWHVHEMLFGFAMAIVAGFLLTAVQNWTGITGTKSHRLALIVAL HHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH WLMVRILFWLPVPLWLTSSIEALFLLAVAYEVGLRVVKAKGWRNLFFIPLFLLAIAANFA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH SYATIKGMPPFPSSAVWQAMLWWFMLLLSVMGGRVIPFFTARRFQFTKAEPILALDVIAN HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHEECCCCCCCEEEEECCC GSLLALFVLSFFPLTTAQLGQPLMLLAGVAQLIRFLRWQSWRTVSEPLVWSLHAAYLCIP CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LSLLLRGGVNNAWLNHNLLHLFAIGALSGLVLSMIARVTMGHTGRAIYQGPNMQWAFIAL HHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH LLAALVRSFGVGLLPQQLLIWVNLSAALWVIAFALFVLRFGAMLLKPRVDGHPG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AWFVLITGSVCDEVGEGAKVINIIDKRVEERIPAVLRLGFRPFFLLGSVYAVVAIVAWV EEEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH WMFQTGQPPRLQVPALWWHVHEMLFGFAMAIVAGFLLTAVQNWTGITGTKSHRLALIVAL HHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH WLMVRILFWLPVPLWLTSSIEALFLLAVAYEVGLRVVKAKGWRNLFFIPLFLLAIAANFA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH SYATIKGMPPFPSSAVWQAMLWWFMLLLSVMGGRVIPFFTARRFQFTKAEPILALDVIAN HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHEECCCCCCCEEEEECCC GSLLALFVLSFFPLTTAQLGQPLMLLAGVAQLIRFLRWQSWRTVSEPLVWSLHAAYLCIP CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LSLLLRGGVNNAWLNHNLLHLFAIGALSGLVLSMIARVTMGHTGRAIYQGPNMQWAFIAL HHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH LLAALVRSFGVGLLPQQLLIWVNLSAALWVIAFALFVLRFGAMLLKPRVDGHPG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA