| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ysgA [C]
Identifier: 146343888
GI number: 146343888
Start: 7452737
End: 7453408
Strand: Direct
Name: ysgA [C]
Synonym: BRADO7139
Alternate gene names: 146343888
Gene position: 7452737-7453408 (Clockwise)
Preceding gene: 146343887
Following gene: 146343892
Centisome position: 99.95
GC content: 66.07
Gene sequence:
>672_bases GTGGGACAGGATATCAAGCTCACCGCATCGGACGGCTTTCAGCTCGGCGCCTATCGCGCCGACCCGTCCTCGGCCTCCAA GGGCGCGCTGGTCGTGATCCAGGAGATTTTCGGCGTCAACCATCATATCCGCAACGTCTGCGACCGCCTCGCGGCCGAAG GATACGTCGCGATCGCGCCCGCGATCTTCGATCGCGTCGAGCCCAACTTCACCTCGGGCTATTCGCCGGATGAAATCGCC GTGGCGCGGAAATTCGTCGCCAACCCGGACTGGCAGGCGTTCCTGCGCGACACCCAGGCCGCGATCGCTGCGGTGAAGGA TGCAGGCCCCGTGGGAATCATCGGCTTCTGCCTCGGCGGCAGCATCGCCTATGCGGCCGCGACCAAGCTCACCGGATTGA AGGCGGCCGTCGGCTATTATGGCGGCGCCGTCGTGCGCTTCGCGGATGACAAGCCAGCCGTCCCGACGCAGCTGCATTTC GGCGAGAAGGACGCCGGCATTCCGCTGACCGATGTCGAGACCATCAAGGCCAAGCGCCCCGACGTCGAGATCTTCGTCTA TCCCGGCGCCCAGCACGGCTTCGGCTGCGACGAGCGCGCGAGCTACGACAAGCCGAGCTCGGATCTGGCCTGGACGCGCA GCCTGGCGTTCTTCGCGCAGCATCTGCGCTGA
Upstream 100 bases:
>100_bases AAGTTCCGTGGGGGTCGGCTGACCGGCTGGAAAGAGGACTACGGCACCAATTGGATGTGGCGCTGAAACGCGCCATCGCG ACGTCTTAAAAGGAGTCAAC
Downstream 100 bases:
>100_bases TCATTCTCCTTCGTCATTGCGAGGAGCGCAGCGACGAAGCGATCCAGGGCGTCACGCGCGACCCTGGATTGCTTCGGCTC GCTCGCAATGACGGTGGAGC
Product: putative carboxymethylenebutenolidase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAPAIFDRVEPNFTSGYSPDEIA VARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGGSIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHF GEKDAGIPLTDVETIKAKRPDVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR
Sequences:
>Translated_223_residues MGQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAPAIFDRVEPNFTSGYSPDEIA VARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGGSIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHF GEKDAGIPLTDVETIKAKRPDVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR >Mature_222_residues GQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAPAIFDRVEPNFTSGYSPDEIAV ARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGGSIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHFG EKDAGIPLTDVETIKAKRPDVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI20270371, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=4e-14, Organism=Escherichia coli, GI48994982, Length=234, Percent_Identity=37.6068376068376, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 23794; Mature: 23663
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAP CCCCEEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCEEEEHH AIFDRVEPNFTSGYSPDEIAVARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGG HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHCC SIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHFGEKDAGIPLTDVETIKAKRP HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCC DVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure GQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAP CCCEEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCEEEEHH AIFDRVEPNFTSGYSPDEIAVARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGG HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHCC SIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHFGEKDAGIPLTDVETIKAKRP HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCC DVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]