Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is ysgA [C]

Identifier: 146343888

GI number: 146343888

Start: 7452737

End: 7453408

Strand: Direct

Name: ysgA [C]

Synonym: BRADO7139

Alternate gene names: 146343888

Gene position: 7452737-7453408 (Clockwise)

Preceding gene: 146343887

Following gene: 146343892

Centisome position: 99.95

GC content: 66.07

Gene sequence:

>672_bases
GTGGGACAGGATATCAAGCTCACCGCATCGGACGGCTTTCAGCTCGGCGCCTATCGCGCCGACCCGTCCTCGGCCTCCAA
GGGCGCGCTGGTCGTGATCCAGGAGATTTTCGGCGTCAACCATCATATCCGCAACGTCTGCGACCGCCTCGCGGCCGAAG
GATACGTCGCGATCGCGCCCGCGATCTTCGATCGCGTCGAGCCCAACTTCACCTCGGGCTATTCGCCGGATGAAATCGCC
GTGGCGCGGAAATTCGTCGCCAACCCGGACTGGCAGGCGTTCCTGCGCGACACCCAGGCCGCGATCGCTGCGGTGAAGGA
TGCAGGCCCCGTGGGAATCATCGGCTTCTGCCTCGGCGGCAGCATCGCCTATGCGGCCGCGACCAAGCTCACCGGATTGA
AGGCGGCCGTCGGCTATTATGGCGGCGCCGTCGTGCGCTTCGCGGATGACAAGCCAGCCGTCCCGACGCAGCTGCATTTC
GGCGAGAAGGACGCCGGCATTCCGCTGACCGATGTCGAGACCATCAAGGCCAAGCGCCCCGACGTCGAGATCTTCGTCTA
TCCCGGCGCCCAGCACGGCTTCGGCTGCGACGAGCGCGCGAGCTACGACAAGCCGAGCTCGGATCTGGCCTGGACGCGCA
GCCTGGCGTTCTTCGCGCAGCATCTGCGCTGA

Upstream 100 bases:

>100_bases
AAGTTCCGTGGGGGTCGGCTGACCGGCTGGAAAGAGGACTACGGCACCAATTGGATGTGGCGCTGAAACGCGCCATCGCG
ACGTCTTAAAAGGAGTCAAC

Downstream 100 bases:

>100_bases
TCATTCTCCTTCGTCATTGCGAGGAGCGCAGCGACGAAGCGATCCAGGGCGTCACGCGCGACCCTGGATTGCTTCGGCTC
GCTCGCAATGACGGTGGAGC

Product: putative carboxymethylenebutenolidase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MGQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAPAIFDRVEPNFTSGYSPDEIA
VARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGGSIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHF
GEKDAGIPLTDVETIKAKRPDVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR

Sequences:

>Translated_223_residues
MGQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAPAIFDRVEPNFTSGYSPDEIA
VARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGGSIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHF
GEKDAGIPLTDVETIKAKRPDVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR
>Mature_222_residues
GQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAPAIFDRVEPNFTSGYSPDEIAV
ARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGGSIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHFG
EKDAGIPLTDVETIKAKRPDVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI20270371, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI48994982, Length=234, Percent_Identity=37.6068376068376, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 23794; Mature: 23663

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAP
CCCCEEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCEEEEHH
AIFDRVEPNFTSGYSPDEIAVARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGG
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHCC
SIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHFGEKDAGIPLTDVETIKAKRP
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCC
DVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR
CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GQDIKLTASDGFQLGAYRADPSSASKGALVVIQEIFGVNHHIRNVCDRLAAEGYVAIAP
CCCEEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCEEEEHH
AIFDRVEPNFTSGYSPDEIAVARKFVANPDWQAFLRDTQAAIAAVKDAGPVGIIGFCLGG
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHCC
SIAYAAATKLTGLKAAVGYYGGAVVRFADDKPAVPTQLHFGEKDAGIPLTDVETIKAKRP
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCC
DVEIFVYPGAQHGFGCDERASYDKPSSDLAWTRSLAFFAQHLR
CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]