| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is arnC [H]
Identifier: 146343851
GI number: 146343851
Start: 7414648
End: 7416156
Strand: Reverse
Name: arnC [H]
Synonym: BRADO7101
Alternate gene names: 146343851
Gene position: 7416156-7414648 (Counterclockwise)
Preceding gene: 146343852
Following gene: 146343850
Centisome position: 99.46
GC content: 65.01
Gene sequence:
>1509_bases GTGGCGGAATTGGACGGTCAGGTCCTGCAGGACGCGCATGAGCAGCCGCCGGCTGCGGAAATCGACACGCCGGCGCCGAA GGCTCTGTCGTCGCGCAAGGCCGCGATCCTCGCTCATGCCAACCGCTTTGCCGCCGACCGCGCCGGCTGGCGCGAGAAAG CTGCGTTCTTCCATGGCGAGGACGAGTGCTATCTGCGCTTTCTGATCCCGCCCGGAAGCCGTGTGCTGGAGATCGGCTGC GGGCTTGGCGACACGCTGGCGTCGCTGCAGCCCTCCTACGGTGTCGGCATCGATTTCAGCGAGGCGCAGATCTCGCAGGC GCGGACCCGCCATCCGAACCTCACCTTCGTCACCGGCGATGCCGAGGACCCCGCGACGCTTGCCGCGGTGTCCGGTCCGT TCGACGCGATCCTGGTGCTGGATACGATCGGCTCGCTCGACGACTGCCAGCAGTTCATCGCACAACTGCATCCCTTGTGC ACGCGCGAGACGCGGCTCGTGATCGGCTACTTCTCGCACCTCTGGTATCCGCTGCTCAAGGCCGCCGAGGCGATGGGCTG GCGCATGCCGCAACCGGAGCAGAACGTGTTGTCGCCGGCCGACCTGCGCAACCTCGCCGTCCTCGCGGATTTCGATCCCG TGAAGTCCGAGCAGCGCGTGCTGTCGCCGCTGCGGCTCGCCGGCATCGGCCGCTTCGTCAATCGTTTCCTCAGCGTGCTT CCGAGCCTGCGCGCGCTGTCGCTGCGGCACTATCTGGTGGCGCGGTCGATGCGCTGCGTCAGCGATGACGTCCGCTCGGC CACCGTCGTCATCCCCGCCCGCAACGAGCGCGGCAACATCGAGCCGGCAGTGCAGCGCATCGCGGAGTTCTGCAAGGATA TCGAGATCATCTTCATCGAGGGCCACAGCAGGGACGGCACCTATGAGGAGATGGAGCGTGTGCGCGCGGCCTATCCGAAC CACGACATCAAGCTGATGCGTCAGCCGGGGAAGGGCAAGGCGGATGCGGTGTTCACGGCGTTCGATGCCGCGCGCGGCGA CGTGCTGATGATCCTCGATGCGGACCTCACCATGCCGCCGGAGCAGTTGCCAAAATTCTTCGAGGCGCTGCGCTCCGGCA AGGGCGAGTTCATCAACGGCTCGCGTCTGGTCTATCCGATGGACGAGGGCGCGATGCGGTTCCTCAATCTGATCGCCAAC AAGACGTTCTCCTATCTGTTCTCGTGGCTGCTCAACCAGCGCTACACGGACACGCTCTGCGGCACCAAGGTCCTGCGCCG CAGCGACTATCTCAGGCTGAAGGCCGGCAAGGCGTATTTCGGCGACTTCGATCCGTTCGGCGATTTCGACCTGATCTTCG GCGCCTCCAAGCTGAACCTGAAAACCATCGACCTGCCGATCCGCTACGCCGCGCGCAGCTACGGCGAAACCCAGATCTCC CGCTTCCGCCACGGCTGGATGCTGCTGAAGATGGTCGTGTTCGCGTTCTTCAAGATCAAGGCGATCTGA
Upstream 100 bases:
>100_bases CGCGCCGCGTGCCTGACACGGAGAACGTCTCCGACCCGCCTTGACTCTGCCCCACCCGGCTGGCCTTAGAAGGCGGGTCT CCCAATGAGGATGGTATCAG
Downstream 100 bases:
>100_bases GCATGGCGGGCGACGCTGCCGCGATCGTTGCCTCTCACCGCGTGCGGGGAGAGGCCCGATGGCGTCGCAGATGCGATTTG GGTGAGGGGAACGCTCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MAELDGQVLQDAHEQPPAAEIDTPAPKALSSRKAAILAHANRFAADRAGWREKAAFFHGEDECYLRFLIPPGSRVLEIGC GLGDTLASLQPSYGVGIDFSEAQISQARTRHPNLTFVTGDAEDPATLAAVSGPFDAILVLDTIGSLDDCQQFIAQLHPLC TRETRLVIGYFSHLWYPLLKAAEAMGWRMPQPEQNVLSPADLRNLAVLADFDPVKSEQRVLSPLRLAGIGRFVNRFLSVL PSLRALSLRHYLVARSMRCVSDDVRSATVVIPARNERGNIEPAVQRIAEFCKDIEIIFIEGHSRDGTYEEMERVRAAYPN HDIKLMRQPGKGKADAVFTAFDAARGDVLMILDADLTMPPEQLPKFFEALRSGKGEFINGSRLVYPMDEGAMRFLNLIAN KTFSYLFSWLLNQRYTDTLCGTKVLRRSDYLRLKAGKAYFGDFDPFGDFDLIFGASKLNLKTIDLPIRYAARSYGETQIS RFRHGWMLLKMVVFAFFKIKAI
Sequences:
>Translated_502_residues MAELDGQVLQDAHEQPPAAEIDTPAPKALSSRKAAILAHANRFAADRAGWREKAAFFHGEDECYLRFLIPPGSRVLEIGC GLGDTLASLQPSYGVGIDFSEAQISQARTRHPNLTFVTGDAEDPATLAAVSGPFDAILVLDTIGSLDDCQQFIAQLHPLC TRETRLVIGYFSHLWYPLLKAAEAMGWRMPQPEQNVLSPADLRNLAVLADFDPVKSEQRVLSPLRLAGIGRFVNRFLSVL PSLRALSLRHYLVARSMRCVSDDVRSATVVIPARNERGNIEPAVQRIAEFCKDIEIIFIEGHSRDGTYEEMERVRAAYPN HDIKLMRQPGKGKADAVFTAFDAARGDVLMILDADLTMPPEQLPKFFEALRSGKGEFINGSRLVYPMDEGAMRFLNLIAN KTFSYLFSWLLNQRYTDTLCGTKVLRRSDYLRLKAGKAYFGDFDPFGDFDLIFGASKLNLKTIDLPIRYAARSYGETQIS RFRHGWMLLKMVVFAFFKIKAI >Mature_501_residues AELDGQVLQDAHEQPPAAEIDTPAPKALSSRKAAILAHANRFAADRAGWREKAAFFHGEDECYLRFLIPPGSRVLEIGCG LGDTLASLQPSYGVGIDFSEAQISQARTRHPNLTFVTGDAEDPATLAAVSGPFDAILVLDTIGSLDDCQQFIAQLHPLCT RETRLVIGYFSHLWYPLLKAAEAMGWRMPQPEQNVLSPADLRNLAVLADFDPVKSEQRVLSPLRLAGIGRFVNRFLSVLP SLRALSLRHYLVARSMRCVSDDVRSATVVIPARNERGNIEPAVQRIAEFCKDIEIIFIEGHSRDGTYEEMERVRAAYPNH DIKLMRQPGKGKADAVFTAFDAARGDVLMILDADLTMPPEQLPKFFEALRSGKGEFINGSRLVYPMDEGAMRFLNLIANK TFSYLFSWLLNQRYTDTLCGTKVLRRSDYLRLKAGKAYFGDFDPFGDFDLIFGASKLNLKTIDLPIRYAARSYGETQISR FRHGWMLLKMVVFAFFKIKAI
Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325441, Length=110, Percent_Identity=35.4545454545455, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022857 - InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: =2.7.8.30 [H]
Molecular weight: Translated: 56160; Mature: 56029
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELDGQVLQDAHEQPPAAEIDTPAPKALSSRKAAILAHANRFAADRAGWREKAAFFHGE CCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCHHEEHHHHHHHHHHCCCHHHHHEECCC DECYLRFLIPPGSRVLEIGCGLGDTLASLQPSYGVGIDFSEAQISQARTRHPNLTFVTGD CCEEEEEEECCCCCEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECC AEDPATLAAVSGPFDAILVLDTIGSLDDCQQFIAQLHPLCTRETRLVIGYFSHLWYPLLK CCCCCEEEEECCCCCEEEEEHHCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHH AAEAMGWRMPQPEQNVLSPADLRNLAVLADFDPVKSEQRVLSPLRLAGIGRFVNRFLSVL HHHHHCCCCCCCHHHCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PSLRALSLRHYLVARSMRCVSDDVRSATVVIPARNERGNIEPAVQRIAEFCKDIEIIFIE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEE GHSRDGTYEEMERVRAAYPNHDIKLMRQPGKGKADAVFTAFDAARGDVLMILDADLTMPP CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCH EQLPKFFEALRSGKGEFINGSRLVYPMDEGAMRFLNLIANKTFSYLFSWLLNQRYTDTLC HHHHHHHHHHHCCCCCEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GTKVLRRSDYLRLKAGKAYFGDFDPFGDFDLIFGASKLNLKTIDLPIRYAARSYGETQIS HHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEECCCHHHHHHHCCHHHHH RFRHGWMLLKMVVFAFFKIKAI HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AELDGQVLQDAHEQPPAAEIDTPAPKALSSRKAAILAHANRFAADRAGWREKAAFFHGE CCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCHHEEHHHHHHHHHHCCCHHHHHEECCC DECYLRFLIPPGSRVLEIGCGLGDTLASLQPSYGVGIDFSEAQISQARTRHPNLTFVTGD CCEEEEEEECCCCCEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECC AEDPATLAAVSGPFDAILVLDTIGSLDDCQQFIAQLHPLCTRETRLVIGYFSHLWYPLLK CCCCCEEEEECCCCCEEEEEHHCCCHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHH AAEAMGWRMPQPEQNVLSPADLRNLAVLADFDPVKSEQRVLSPLRLAGIGRFVNRFLSVL HHHHHCCCCCCCHHHCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PSLRALSLRHYLVARSMRCVSDDVRSATVVIPARNERGNIEPAVQRIAEFCKDIEIIFIE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEE GHSRDGTYEEMERVRAAYPNHDIKLMRQPGKGKADAVFTAFDAARGDVLMILDADLTMPP CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCH EQLPKFFEALRSGKGEFINGSRLVYPMDEGAMRFLNLIANKTFSYLFSWLLNQRYTDTLC HHHHHHHHHHHCCCCCEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GTKVLRRSDYLRLKAGKAYFGDFDPFGDFDLIFGASKLNLKTIDLPIRYAARSYGETQIS HHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEECCCHHHHHHHCCHHHHH RFRHGWMLLKMVVFAFFKIKAI HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA