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The map label for this gene is ydfH [C]

Identifier: 146343844

GI number: 146343844

Start: 7406934

End: 7407671

Strand: Direct

Name: ydfH [C]

Synonym: BRADO7094

Alternate gene names: 146343844

Gene position: 7406934-7407671 (Clockwise)

Preceding gene: 146343838

Following gene: 146343846

Centisome position: 99.33

GC content: 70.73

Gene sequence:

>738_bases
ATGGCGATGCGAGCGCAGCGAATCGGGAAGGCCAATCCCGCCGAGGACGAGGCGGTGTATCAGGCCATTCTGCGCGCCCT
GCTGGAGGGCAAGCTGAAGGCCGGCACCAAGCTCGCGGAGACGCCGCTGGCGTCGATCTTCGGCGTGTCGCGCGAGCGCA
TCCGGAAAGTGCTGCACCGGCTCGGTGCCGAGCGGCGGCTGGAGATGATTCCGAACCGCGGCGCGCGGGTGCCGCGGCCG
ACGCTGGAGGATGTCCGCCGTGTCTACGAGGCGCATCGCGTGCTCGAGGCTGGCGTGCTCAGCCAGCTAAGCTTGCGGAT
CGACGAGGTGCTGCTCGCCCGGCTCGACGCGCACCTCGCCGAGGAGCGCATCGCCGCGCAGCGCGGCGATCGCGCCGCTT
CGGTCCGGCTGTCCGGCGCGTTCCATGTCCATCTCGTCGATGCCCTCGGCAATCCCGAATTGTCGCGCATGCTCGCCGAC
CTGCTCAGCCGTTCCTCGGTGATGGTCTCGGTGTACGAGCCGGCGGCGCAGTCGATCTGCGCGGTCGACGAGCACGGCGC
CATCGTCGCGGCGCTGCGCGACCGCGACCTGCTGCGCGCCATCGCGGTGTCGCGCGAGCACTTCCTACATGTCGAAGGCC
GGCTGCGGCTCGACGAGGACGAGGCCGCGCCGACCCAGGATCTCGCCGCCGTATTCGCCGGACGGCGGCCGCTGCGCGGC
AAGCTCAAATCGGCCTGA

Upstream 100 bases:

>100_bases
ATTTAGCCAATCGGCCGGTGCGCGCTGTGCCTCCTCGCGTGCATAATGTGCACATTTTTTGGAGATGACCTGCCGCGGCT
TTGGGCCTAGTGAGGCCGGC

Downstream 100 bases:

>100_bases
TCGCCGCACGCTCTATTTGCTCGTCAGCGCGGTGACGGCGCGCCAATGCTGATCCGGCTGCGTCTCGGCCCATGTCCGGC
AGCGCGCGATCATGACCTCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR-Family Transcriptional Regulator; Transcriptional Regulator Protein GntR Family; Transcriptional Regulator Gntr Family; Transcriptional Regulator Protein; GntR Domain-Containing Protein; GntR Family Regulatory Protein; GntR Family Transcription Regulator Protein; Bacterial Regulatory Protein; Transcription Regulator Protein; FCD Domain Protein; Transcriptional Regulator GntR Family Protein; GntR-Type Regulator; TRANSCRIPTIONal REGULATOR GntR Family

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAMRAQRIGKANPAEDEAVYQAILRALLEGKLKAGTKLAETPLASIFGVSRERIRKVLHRLGAERRLEMIPNRGARVPRP
TLEDVRRVYEAHRVLEAGVLSQLSLRIDEVLLARLDAHLAEERIAAQRGDRAASVRLSGAFHVHLVDALGNPELSRMLAD
LLSRSSVMVSVYEPAAQSICAVDEHGAIVAALRDRDLLRAIAVSREHFLHVEGRLRLDEDEAAPTQDLAAVFAGRRPLRG
KLKSA

Sequences:

>Translated_245_residues
MAMRAQRIGKANPAEDEAVYQAILRALLEGKLKAGTKLAETPLASIFGVSRERIRKVLHRLGAERRLEMIPNRGARVPRP
TLEDVRRVYEAHRVLEAGVLSQLSLRIDEVLLARLDAHLAEERIAAQRGDRAASVRLSGAFHVHLVDALGNPELSRMLAD
LLSRSSVMVSVYEPAAQSICAVDEHGAIVAALRDRDLLRAIAVSREHFLHVEGRLRLDEDEAAPTQDLAAVFAGRRPLRG
KLKSA
>Mature_244_residues
AMRAQRIGKANPAEDEAVYQAILRALLEGKLKAGTKLAETPLASIFGVSRERIRKVLHRLGAERRLEMIPNRGARVPRPT
LEDVRRVYEAHRVLEAGVLSQLSLRIDEVLLARLDAHLAEERIAAQRGDRAASVRLSGAFHVHLVDALGNPELSRMLADL
LSRSSVMVSVYEPAAQSICAVDEHGAIVAALRDRDLLRAIAVSREHFLHVEGRLRLDEDEAAPTQDLAAVFAGRRPLRGK
LKSA

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26997; Mature: 26865

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMRAQRIGKANPAEDEAVYQAILRALLEGKLKAGTKLAETPLASIFGVSRERIRKVLHR
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
LGAERRLEMIPNRGARVPRPTLEDVRRVYEAHRVLEAGVLSQLSLRIDEVLLARLDAHLA
HCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERIAAQRGDRAASVRLSGAFHVHLVDALGNPELSRMLADLLSRSSVMVSVYEPAAQSIC
HHHHHHHCCCCCEEEEECCEEEEEEEHHCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHH
AVDEHGAIVAALRDRDLLRAIAVSREHFLHVEGRLRLDEDEAAPTQDLAAVFAGRRPLRG
HCCCCCCEEEEHHHHHHHHHHHHHHHHEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCC
KLKSA
CCCCC
>Mature Secondary Structure 
AMRAQRIGKANPAEDEAVYQAILRALLEGKLKAGTKLAETPLASIFGVSRERIRKVLHR
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
LGAERRLEMIPNRGARVPRPTLEDVRRVYEAHRVLEAGVLSQLSLRIDEVLLARLDAHLA
HCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERIAAQRGDRAASVRLSGAFHVHLVDALGNPELSRMLADLLSRSSVMVSVYEPAAQSIC
HHHHHHHCCCCCEEEEECCEEEEEEEHHCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHH
AVDEHGAIVAALRDRDLLRAIAVSREHFLHVEGRLRLDEDEAAPTQDLAAVFAGRRPLRG
HCCCCCCEEEEHHHHHHHHHHHHHHHHEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCC
KLKSA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA