| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is sgaA [H]
Identifier: 146343738
GI number: 146343738
Start: 7279840
End: 7281027
Strand: Direct
Name: sgaA [H]
Synonym: BRADO6985
Alternate gene names: 146343738
Gene position: 7279840-7281027 (Clockwise)
Preceding gene: 146343737
Following gene: 146343739
Centisome position: 97.63
GC content: 67.85
Gene sequence:
>1188_bases ATGACCGTTCGCGCGGGCCGGGAGTTTCTGGCCATCCCGGGACCCACCACGATGCCCGACGAGGTGCTTCAGGCGATGCA CCGCCCGGCGCTGGACATCTACTCCAGGCAGATGGTGGAGCTGACCGACGGCATCCTGTCCGACCTCGGGCGGCTGTTCG CGACCAAGGGCAAGACCTACATCTACATCGCCAACGGCCATGGCGCCTGGGAGGCCGTGCTCTCGAACGTGCTGTCGCGC GGCGACAAGGTTCTGGTGCTGGAGAGCGGGCGCTTCGCGGTGGGCTGGGGCCATGCGGCGAAAGCGATGGGTGCCGAGGT CGAAGTGCTGCGCGGCGACTGGCGGCGCGCGGTGCGCCCGGCCGAGGTCGAGGCGCGGCTTCGCGCCGACAAGGAACATA CGATCAAGGCCATCGTGGTGGCGCAGATCGACACCGCCTCGGGTGTCGTCAACGACGTCGAGGCGATCGGCCGCGCAATC CGGGCGAGCGGTCACCCGGCGCTCTACATGGTCGACACCGTGGCCTCGCTCGGCTGCATGCCGTTCGAAATGGACGCCTG GCACATCGACGTCGCGATGTCCGGCTCGCAGAAGGGCCTGATGACGCCGCCCGGCCTCGGCTTCGTCGCGGCGAACGCGC GCGCGCTCGAGGTGCACAAGCGCGCCAACATGCGCACGCCGTATTGGGATTGGAGCGAGCGCGAGGGCACCGAGCATTAT CGTAAATATGGCGGCACCGCGCCGGTGCATCTGTTGTTCGCGCTGCGCCAGGCCATGGACATGCTGTTCGCCGAAGGCCT GCCGCATGCGTTCCGCCGGCATCAATTGCTCGGCGAGGCCGTGCGCCGCGCGGTCGCCAAGTGGAGCGAGGGCCAGGTGA TCGGCTTCAACATCGAGGACGCCACCGAGCGCTCCAACACGGTGACCACCGTGCTGGTCGGCGAAGGCTATGATCCGGCC GTGCTGCAGGCCTACTGCAAGGAGCAGTGCGGCGTGGTGCTCGGCACCGGGATCGGCGATCTCAGCGGCAAGGCCTTCCG CATCGCCCATATGGGGCATGTCAACGCGCCGATGGTGCTGGGCACGCTCGGCGTGATCGAAATGGCCCTCGTGGCGTTGA AGATCCCGCATGGCCGCGGCGGCCTGGATGCAGCGATCCAATGGCTCGGCGAGAGTGTGACCGCATAA
Upstream 100 bases:
>100_bases CCGTGCCACGTAAAACCATCAGCGGGCTCGCCCTGCGCGGGAGCCCGCCACCCCAATCGCAAGACCACATCGCCCAAATC ATTCGCCAAGGACACTGACA
Downstream 100 bases:
>100_bases GGACCGACATGACCGACAGCAGCACCAAGGCGCCGGTGGCGCCACGCCGTCCGTATTCTTTCACCCGCCACGGCATCACC GTGCAGGACGATTACGCCTG
Product: putative aminotransferase, class V Serine--glyoxylate aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTVRAGREFLAIPGPTTMPDEVLQAMHRPALDIYSRQMVELTDGILSDLGRLFATKGKTYIYIANGHGAWEAVLSNVLSR GDKVLVLESGRFAVGWGHAAKAMGAEVEVLRGDWRRAVRPAEVEARLRADKEHTIKAIVVAQIDTASGVVNDVEAIGRAI RASGHPALYMVDTVASLGCMPFEMDAWHIDVAMSGSQKGLMTPPGLGFVAANARALEVHKRANMRTPYWDWSEREGTEHY RKYGGTAPVHLLFALRQAMDMLFAEGLPHAFRRHQLLGEAVRRAVAKWSEGQVIGFNIEDATERSNTVTTVLVGEGYDPA VLQAYCKEQCGVVLGTGIGDLSGKAFRIAHMGHVNAPMVLGTLGVIEMALVALKIPHGRGGLDAAIQWLGESVTA
Sequences:
>Translated_395_residues MTVRAGREFLAIPGPTTMPDEVLQAMHRPALDIYSRQMVELTDGILSDLGRLFATKGKTYIYIANGHGAWEAVLSNVLSR GDKVLVLESGRFAVGWGHAAKAMGAEVEVLRGDWRRAVRPAEVEARLRADKEHTIKAIVVAQIDTASGVVNDVEAIGRAI RASGHPALYMVDTVASLGCMPFEMDAWHIDVAMSGSQKGLMTPPGLGFVAANARALEVHKRANMRTPYWDWSEREGTEHY RKYGGTAPVHLLFALRQAMDMLFAEGLPHAFRRHQLLGEAVRRAVAKWSEGQVIGFNIEDATERSNTVTTVLVGEGYDPA VLQAYCKEQCGVVLGTGIGDLSGKAFRIAHMGHVNAPMVLGTLGVIEMALVALKIPHGRGGLDAAIQWLGESVTA >Mature_394_residues TVRAGREFLAIPGPTTMPDEVLQAMHRPALDIYSRQMVELTDGILSDLGRLFATKGKTYIYIANGHGAWEAVLSNVLSRG DKVLVLESGRFAVGWGHAAKAMGAEVEVLRGDWRRAVRPAEVEARLRADKEHTIKAIVVAQIDTASGVVNDVEAIGRAIR ASGHPALYMVDTVASLGCMPFEMDAWHIDVAMSGSQKGLMTPPGLGFVAANARALEVHKRANMRTPYWDWSEREGTEHYR KYGGTAPVHLLFALRQAMDMLFAEGLPHAFRRHQLLGEAVRRAVAKWSEGQVIGFNIEDATERSNTVTTVLVGEGYDPAV LQAYCKEQCGVVLGTGIGDLSGKAFRIAHMGHVNAPMVLGTLGVIEMALVALKIPHGRGGLDAAIQWLGESVTA
Specific function: Fe-S cluster biosynthesis [C]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=370, Percent_Identity=28.3783783783784, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17536281, Length=348, Percent_Identity=30.1724137931034, Blast_Score=132, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6321079, Length=382, Percent_Identity=26.9633507853403, Blast_Score=129, Evalue=9e-31, Organism=Drosophila melanogaster, GI17530823, Length=354, Percent_Identity=30.5084745762712, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 42782; Mature: 42651
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRAGREFLAIPGPTTMPDEVLQAMHRPALDIYSRQMVELTDGILSDLGRLFATKGKTY CCCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IYIANGHGAWEAVLSNVLSRGDKVLVLESGRFAVGWGHAAKAMGAEVEVLRGDWRRAVRP EEEECCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHHCCCCCEEEHHHHHHCCCC AEVEARLRADKEHTIKAIVVAQIDTASGVVNDVEAIGRAIRASGHPALYMVDTVASLGCM HHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCC PFEMDAWHIDVAMSGSQKGLMTPPGLGFVAANARALEVHKRANMRTPYWDWSEREGTEHY CEECCCEEEEEEECCCCCCCCCCCCCCEEECCCCEEEHHHHCCCCCCCCCCCCCCCHHHH RKYGGTAPVHLLFALRQAMDMLFAEGLPHAFRRHQLLGEAVRRAVAKWSEGQVIGFNIED HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC ATERSNTVTTVLVGEGYDPAVLQAYCKEQCGVVLGTGIGDLSGKAFRIAHMGHVNAPMVL CCCCCCCEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCHHH GTLGVIEMALVALKIPHGRGGLDAAIQWLGESVTA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TVRAGREFLAIPGPTTMPDEVLQAMHRPALDIYSRQMVELTDGILSDLGRLFATKGKTY CCCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IYIANGHGAWEAVLSNVLSRGDKVLVLESGRFAVGWGHAAKAMGAEVEVLRGDWRRAVRP EEEECCCCHHHHHHHHHHHCCCEEEEEECCCEEEECCHHHHHCCCCCEEEHHHHHHCCCC AEVEARLRADKEHTIKAIVVAQIDTASGVVNDVEAIGRAIRASGHPALYMVDTVASLGCM HHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCC PFEMDAWHIDVAMSGSQKGLMTPPGLGFVAANARALEVHKRANMRTPYWDWSEREGTEHY CEECCCEEEEEEECCCCCCCCCCCCCCEEECCCCEEEHHHHCCCCCCCCCCCCCCCHHHH RKYGGTAPVHLLFALRQAMDMLFAEGLPHAFRRHQLLGEAVRRAVAKWSEGQVIGFNIED HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC ATERSNTVTTVLVGEGYDPAVLQAYCKEQCGVVLGTGIGDLSGKAFRIAHMGHVNAPMVL CCCCCCCEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCHHH GTLGVIEMALVALKIPHGRGGLDAAIQWLGESVTA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8144463 [H]