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The map label for this gene is yddU [C]

Identifier: 146343633

GI number: 146343633

Start: 7138704

End: 7140086

Strand: Direct

Name: yddU [C]

Synonym: BRADO6873

Alternate gene names: 146343633

Gene position: 7138704-7140086 (Clockwise)

Preceding gene: 146343632

Following gene: 146343634

Centisome position: 95.74

GC content: 65.8

Gene sequence:

>1383_bases
GTGCACGGAATGCCCGGCGCCTCCACCGCCCCCCAAATGACCGATGACGATACGGCCTATCTCGCCGCGATCGTGAGCGC
ATCCGCCGATGCGATCTTCGGCACGACCATTGAAGGAATCATTCGCAGCTGGAACGGGTCTTGCGAACGGATGTTGGGCT
ACAGCGCGGCCGAGATGATCGGCCAGCCGGTGATGGACATCATTCCGCCGGAGCTGAGAGAGGAGGCCCAGGCGATTCGG
CAACGTGTCGGCAGCGGGGAAGCCGTTGAAGGCTTCGAAACAGTCCGCCTCACGAAGGATGGGCGGCCGATCGAGGTTGC
CGCGACCTTCTCGCCGATCCGCGACCGTCACGATCGGATCATCGGGATCTCCGGAATCCTGCGCGACGTAACCCAGTCGA
AGCAGGCGGAACGCGGCGCGGCGATGCTCGCCGCGATCGTCGCCTCGTCGTCGGACGGCGTGGTCAGCAAGACGCTGGAC
GGCACCGTCACCAGCTGGAACAAGAGCGCGGAGCGCATCTTCGGCTTCTCGGAAGCCGAGATGATCAACCGCTCGATTCG
CACCATCATTCCGCTCGAGCGTCAGGCCGAGGAGGACCGCATCCTCGCTACCGTCGTCTCGGGCGGGATGATCGACAATT
TCGAAACGATCCGCCTGCGCAAGGATGGCGCGCAGATCGACGTCTCCGTGACGGTCTCGCCGGTACGCGACGCGAGCGGC
CGCATCATCGGCGCCTCGAAGATCGTGCGCGACATCACCGACAAGCGTCAGACGCGCGAGCAGCTGCGCACTTTGCTCGC
CGAGGTGAACCATCGCAGCAAGAACATGCTGTCGCTGGTGCAGGCGATCGCGCGTCAGATGACGCGGCACGGGCGGCAGC
TCGACCTCAACCGTTTCCTCGCGCGCCTGCAGGCAATCGCTGGCAACCAGGATCTCCTGATCCAGAACGACTGGCGTTTC
ATTCCGCTCGTCGACCTCGTCCGCTCGCAGCTCGGCGCCTTCCGCGACCTGATCGGCAACCGCATCGCCATCGACGGTCC
GCAGATCGAGCTGACGCCGGAGGCGGCGCAGGCGATCGGCATGGCGATCCACGAGCTTGCGACCAATGCGGCCAAGTATG
GCGCGCTGTCGGATCATGACGGGCGCGTCGCGCTGACTTGGTCGCGCGATGGCGACACATTCGTCATCAACTGGCGCGAG
AGCGGCGGACCGCCGGTGTCTGCCCCGGAGCATCACGGTTTCGGCAGCCGCGTGATCTCGGACATGGTCCGGGCCGGACT
CGACGGTACCGTGCAGGTCGAGTTCGCCCCGCCGGGGCTGAGCTGGCACCTGAGGTGCCCCCTGCAACGCATCAGCCGCG
GCAACAGCCATGCCCCTCGCTGA

Upstream 100 bases:

>100_bases
TATGCAGCGAACGAGATAGAGCTTGCATTCGTACACAAACGAGTTGGTAATCGGGTGCGCGGCATCGTCTCTGCCGAACT
GCTAGCAAGGAGCGTGCGAC

Downstream 100 bases:

>100_bases
CAAGATCAACGTCCTGATCGTCGAGGACGATCCCATGATCGGCTTCGACCTCTCCGTCGAGCTGGAGGAAGCGGGCTTCG
CCATCGTCGGCGTCGCGCCC

Product: two-component sensor histidine kinase

Products: NA

Alternate protein names: EL360-LOV-histidine kinase; EL360-LOV-HK [H]

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MHGMPGASTAPQMTDDDTAYLAAIVSASADAIFGTTIEGIIRSWNGSCERMLGYSAAEMIGQPVMDIIPPELREEAQAIR
QRVGSGEAVEGFETVRLTKDGRPIEVAATFSPIRDRHDRIIGISGILRDVTQSKQAERGAAMLAAIVASSSDGVVSKTLD
GTVTSWNKSAERIFGFSEAEMINRSIRTIIPLERQAEEDRILATVVSGGMIDNFETIRLRKDGAQIDVSVTVSPVRDASG
RIIGASKIVRDITDKRQTREQLRTLLAEVNHRSKNMLSLVQAIARQMTRHGRQLDLNRFLARLQAIAGNQDLLIQNDWRF
IPLVDLVRSQLGAFRDLIGNRIAIDGPQIELTPEAAQAIGMAIHELATNAAKYGALSDHDGRVALTWSRDGDTFVINWRE
SGGPPVSAPEHHGFGSRVISDMVRAGLDGTVQVEFAPPGLSWHLRCPLQRISRGNSHAPR

Sequences:

>Translated_460_residues
MHGMPGASTAPQMTDDDTAYLAAIVSASADAIFGTTIEGIIRSWNGSCERMLGYSAAEMIGQPVMDIIPPELREEAQAIR
QRVGSGEAVEGFETVRLTKDGRPIEVAATFSPIRDRHDRIIGISGILRDVTQSKQAERGAAMLAAIVASSSDGVVSKTLD
GTVTSWNKSAERIFGFSEAEMINRSIRTIIPLERQAEEDRILATVVSGGMIDNFETIRLRKDGAQIDVSVTVSPVRDASG
RIIGASKIVRDITDKRQTREQLRTLLAEVNHRSKNMLSLVQAIARQMTRHGRQLDLNRFLARLQAIAGNQDLLIQNDWRF
IPLVDLVRSQLGAFRDLIGNRIAIDGPQIELTPEAAQAIGMAIHELATNAAKYGALSDHDGRVALTWSRDGDTFVINWRE
SGGPPVSAPEHHGFGSRVISDMVRAGLDGTVQVEFAPPGLSWHLRCPLQRISRGNSHAPR
>Mature_460_residues
MHGMPGASTAPQMTDDDTAYLAAIVSASADAIFGTTIEGIIRSWNGSCERMLGYSAAEMIGQPVMDIIPPELREEAQAIR
QRVGSGEAVEGFETVRLTKDGRPIEVAATFSPIRDRHDRIIGISGILRDVTQSKQAERGAAMLAAIVASSSDGVVSKTLD
GTVTSWNKSAERIFGFSEAEMINRSIRTIIPLERQAEEDRILATVVSGGMIDNFETIRLRKDGAQIDVSVTVSPVRDASG
RIIGASKIVRDITDKRQTREQLRTLLAEVNHRSKNMLSLVQAIARQMTRHGRQLDLNRFLARLQAIAGNQDLLIQNDWRF
IPLVDLVRSQLGAFRDLIGNRIAIDGPQIELTPEAAQAIGMAIHELATNAAKYGALSDHDGRVALTWSRDGDTFVINWRE
SGGPPVSAPEHHGFGSRVISDMVRAGLDGTVQVEFAPPGLSWHLRCPLQRISRGNSHAPR

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50175; Mature: 50175

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGMPGASTAPQMTDDDTAYLAAIVSASADAIFGTTIEGIIRSWNGSCERMLGYSAAEMI
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH
GQPVMDIIPPELREEAQAIRQRVGSGEAVEGFETVRLTKDGRPIEVAATFSPIRDRHDRI
CCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHCCCE
IGISGILRDVTQSKQAERGAAMLAAIVASSSDGVVSKTLDGTVTSWNKSAERIFGFSEAE
EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHCCCCHHH
MINRSIRTIIPLERQAEEDRILATVVSGGMIDNFETIRLRKDGAQIDVSVTVSPVRDASG
HHHHHHHHHCCCHHCCCHHHEEHHHHCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCC
RIIGASKIVRDITDKRQTREQLRTLLAEVNHRSKNMLSLVQAIARQMTRHGRQLDLNRFL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ARLQAIAGNQDLLIQNDWRFIPLVDLVRSQLGAFRDLIGNRIAIDGPQIELTPEAAQAIG
HHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHCCEEEECCCCEEECHHHHHHHH
MAIHELATNAAKYGALSDHDGRVALTWSRDGDTFVINWRESGGPPVSAPEHHGFGSRVIS
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH
DMVRAGLDGTVQVEFAPPGLSWHLRCPLQRISRGNSHAPR
HHHHCCCCCEEEEEEECCCCCEEEECCHHHHCCCCCCCCC
>Mature Secondary Structure
MHGMPGASTAPQMTDDDTAYLAAIVSASADAIFGTTIEGIIRSWNGSCERMLGYSAAEMI
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH
GQPVMDIIPPELREEAQAIRQRVGSGEAVEGFETVRLTKDGRPIEVAATFSPIRDRHDRI
CCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHCCCE
IGISGILRDVTQSKQAERGAAMLAAIVASSSDGVVSKTLDGTVTSWNKSAERIFGFSEAE
EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHCCCCHHH
MINRSIRTIIPLERQAEEDRILATVVSGGMIDNFETIRLRKDGAQIDVSVTVSPVRDASG
HHHHHHHHHCCCHHCCCHHHEEHHHHCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCC
RIIGASKIVRDITDKRQTREQLRTLLAEVNHRSKNMLSLVQAIARQMTRHGRQLDLNRFL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ARLQAIAGNQDLLIQNDWRFIPLVDLVRSQLGAFRDLIGNRIAIDGPQIELTPEAAQAIG
HHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHCCEEEECCCCEEECHHHHHHHH
MAIHELATNAAKYGALSDHDGRVALTWSRDGDTFVINWRESGGPPVSAPEHHGFGSRVIS
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH
DMVRAGLDGTVQVEFAPPGLSWHLRCPLQRISRGNSHAPR
HHHHCCCCCEEEEEEECCCCCEEEECCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA