| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is fsr [H]
Identifier: 146343622
GI number: 146343622
Start: 7124261
End: 7125484
Strand: Direct
Name: fsr [H]
Synonym: BRADO6861
Alternate gene names: 146343622
Gene position: 7124261-7125484 (Clockwise)
Preceding gene: 146343618
Following gene: 146343623
Centisome position: 95.54
GC content: 67.32
Gene sequence:
>1224_bases ATGGCTGACGTTCTTGCCGCATCGCAACATAGCGGTGCTCCGGTCCGGGCCGCCTCCTCGCTGCGGACACTGGCGCTGAT CTCGCTCGCCCATTGGGTCAGCCACCTGCACATGCTGGTGCTGCCGATGCTGTTTCCCTATCTCAAGCAGAAGCTCGGGG TCGGCTATGTCGAGCTCGGCTTTCCGCTCACCGTCTTCGCGGTGGTCTCGGCGCTGACCCAGGCCCCGGTCGGCTATCTC GTCGACCGCGCCGGCGCTCGCCGCATCCTGCTGCTGGGCCTGACGCTCGGCGGGCTTTCGCTCGCGATGCTCGGTGTCTA CCTGAGCTACGCCAGCCTGGTCGTCTCGGCCGTGCTGCTCGGCCTCGCCAATGCGGTCTATCACCCCTCCGACTACGCGC TGCTGTCGGCGCATATGGAAGAGAGCCGGATGGGCCGCGCCTTCGGCGTGCACACTTTTGCCGGCTATCTCGGCGGCGCA GTCGCGCCGGCCGTCATGGCCGCGCTGGTCACCACCGTCGGCGGCTCCGGTGCGCTGATCGCAGCTGGCCTGGTCGGGCC TCTCGCCGCGTTGCTGCTCCTGGTCGGCAACGTGCCGGAGGTGCCGCCGCATCCGCACGCCACCAAGGCTGATGGCACCA AGGTCAAGCAGCCGGGCCTGCTGACGCCGATGCTGATGCTGCTGACCGTGTTCTTCATGCTGCTCAGCCTGTCCAACGCC GGCATCTCCAGCTTTGGCGTGGTCGCCTTCATGAACGGCTACGGCATCTCGTTCTCGACCGCCAACATCGCGCTCACCGC CTTCCTGGGCGCCAGCGCGGTCGGCGTGCTCGCCGGCGGCCAGCTCGCCGACCGCATCCGTCATCACAATCTGGTCGCTG CGGTCGCCTATGCGATCAACGCCGTGCTGGTGCTGATCATCACCTTCGTCAGCCTGCACCCCGTGCTGCTGGTTGCGATC ATGCTGACCGCGGGCTTCATGAGCGGCGTGATCGCGCCGTCGCGCGACATGCTGGTGCGCAACGCCGCCCCTCCCGGCGC CGCCGGCCGCGCCTTCGGCATCGTCTCCACCGGCTTCAACTTCGCCGGCGTCGTCAGCCCGCTGCTGTTCGGCTGGATCA TGGACATGAACGCCCCGCGCTGGGTGTTCGGCACGTCAGTGGTGTTCATGCTGCTGACCATCGTGCTGGCGTTCTTCACC GAGCCGAAGAAGAAGATGACGTAG
Upstream 100 bases:
>100_bases TGTGACGCTTCGTCGCGCCACGGCGCGAGAGCGCGCGACCGGGGGTGAGCCGTCGCGACAATCCAAACGCATATGGACCC GGGAGCCGAACGGATCACGC
Downstream 100 bases:
>100_bases CTGTCGTCGTGGGGTAGGCAGAGCTCAGCGTGCCCACCGCCAAGACCATCGCGGTGAACGGTGGGCACGCTTCGCTCCGC CCACCCGACGCAAGGGCTCC
Product: major facilitator superfamily permease
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MADVLAASQHSGAPVRAASSLRTLALISLAHWVSHLHMLVLPMLFPYLKQKLGVGYVELGFPLTVFAVVSALTQAPVGYL VDRAGARRILLLGLTLGGLSLAMLGVYLSYASLVVSAVLLGLANAVYHPSDYALLSAHMEESRMGRAFGVHTFAGYLGGA VAPAVMAALVTTVGGSGALIAAGLVGPLAALLLLVGNVPEVPPHPHATKADGTKVKQPGLLTPMLMLLTVFFMLLSLSNA GISSFGVVAFMNGYGISFSTANIALTAFLGASAVGVLAGGQLADRIRHHNLVAAVAYAINAVLVLIITFVSLHPVLLVAI MLTAGFMSGVIAPSRDMLVRNAAPPGAAGRAFGIVSTGFNFAGVVSPLLFGWIMDMNAPRWVFGTSVVFMLLTIVLAFFT EPKKKMT
Sequences:
>Translated_407_residues MADVLAASQHSGAPVRAASSLRTLALISLAHWVSHLHMLVLPMLFPYLKQKLGVGYVELGFPLTVFAVVSALTQAPVGYL VDRAGARRILLLGLTLGGLSLAMLGVYLSYASLVVSAVLLGLANAVYHPSDYALLSAHMEESRMGRAFGVHTFAGYLGGA VAPAVMAALVTTVGGSGALIAAGLVGPLAALLLLVGNVPEVPPHPHATKADGTKVKQPGLLTPMLMLLTVFFMLLSLSNA GISSFGVVAFMNGYGISFSTANIALTAFLGASAVGVLAGGQLADRIRHHNLVAAVAYAINAVLVLIITFVSLHPVLLVAI MLTAGFMSGVIAPSRDMLVRNAAPPGAAGRAFGIVSTGFNFAGVVSPLLFGWIMDMNAPRWVFGTSVVFMLLTIVLAFFT EPKKKMT >Mature_406_residues ADVLAASQHSGAPVRAASSLRTLALISLAHWVSHLHMLVLPMLFPYLKQKLGVGYVELGFPLTVFAVVSALTQAPVGYLV DRAGARRILLLGLTLGGLSLAMLGVYLSYASLVVSAVLLGLANAVYHPSDYALLSAHMEESRMGRAFGVHTFAGYLGGAV APAVMAALVTTVGGSGALIAAGLVGPLAALLLLVGNVPEVPPHPHATKADGTKVKQPGLLTPMLMLLTVFFMLLSLSNAG ISSFGVVAFMNGYGISFSTANIALTAFLGASAVGVLAGGQLADRIRHHNLVAAVAYAINAVLVLIITFVSLHPVLLVAIM LTAGFMSGVIAPSRDMLVRNAAPPGAAGRAFGIVSTGFNFAGVVSPLLFGWIMDMNAPRWVFGTSVVFMLLTIVLAFFTE PKKKMT
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=307, Percent_Identity=25.0814332247557, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI2367379, Length=139, Percent_Identity=29.4964028776978, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42227; Mature: 42096
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVLAASQHSGAPVRAASSLRTLALISLAHWVSHLHMLVLPMLFPYLKQKLGVGYVELG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC FPLTVFAVVSALTQAPVGYLVDRAGARRILLLGLTLGGLSLAMLGVYLSYASLVVSAVLL CHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLANAVYHPSDYALLSAHMEESRMGRAFGVHTFAGYLGGAVAPAVMAALVTTVGGSGALI HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AAGLVGPLAALLLLVGNVPEVPPHPHATKADGTKVKQPGLLTPMLMLLTVFFMLLSLSNA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC GISSFGVVAFMNGYGISFSTANIALTAFLGASAVGVLAGGQLADRIRHHNLVAAVAYAIN CCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVLVLIITFVSLHPVLLVAIMLTAGFMSGVIAPSRDMLVRNAAPPGAAGRAFGIVSTGFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEEHHCCCC FAGVVSPLLFGWIMDMNAPRWVFGTSVVFMLLTIVLAFFTEPKKKMT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure ADVLAASQHSGAPVRAASSLRTLALISLAHWVSHLHMLVLPMLFPYLKQKLGVGYVELG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC FPLTVFAVVSALTQAPVGYLVDRAGARRILLLGLTLGGLSLAMLGVYLSYASLVVSAVLL CHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLANAVYHPSDYALLSAHMEESRMGRAFGVHTFAGYLGGAVAPAVMAALVTTVGGSGALI HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AAGLVGPLAALLLLVGNVPEVPPHPHATKADGTKVKQPGLLTPMLMLLTVFFMLLSLSNA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC GISSFGVVAFMNGYGISFSTANIALTAFLGASAVGVLAGGQLADRIRHHNLVAAVAYAIN CCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVLVLIITFVSLHPVLLVAIMLTAGFMSGVIAPSRDMLVRNAAPPGAAGRAFGIVSTGFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEEHHCCCC FAGVVSPLLFGWIMDMNAPRWVFGTSVVFMLLTIVLAFFTEPKKKMT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]