| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gnl [H]
Identifier: 146343525
GI number: 146343525
Start: 7019265
End: 7020167
Strand: Direct
Name: gnl [H]
Synonym: BRADO6760
Alternate gene names: 146343525
Gene position: 7019265-7020167 (Clockwise)
Preceding gene: 146343524
Following gene: 146343528
Centisome position: 94.14
GC content: 65.12
Gene sequence:
>903_bases ATGAGCACCTACGACATCCGTGACCCGCGCTTCAACGCCCTGATCATCGGCCATGCCAAGCTGGAAAAGCTCTGGACCGG CTGCCGCTGGGCGGAAGGCCCCGTCTATGTACCCGCCGCAAAATCGCTGCTGTGGTCGGACATTCCCAACGACCGCATTA TGCGCTTCGACGAGACCGACGGCTCCGTGTCGGTGTTCGAGACACCGTGCGGCTATCACAACGGCCATACGCGCGACGCG CTCGGGCGCGTGATCGCCTGCGAACATGGCGGCCGGCGCATCTCGCGGCTGGAGCACGACGGCAACTGGACCGGGCTAGT CGACCAGTTCGAGGGCAAGCGTTTCAACTCGCCGAATGATGCTGTGGTGAAGTCGGACGGCACGATCTGGTTCTCCGATC CGACCTACGGCATCGACAGCGCCTATGAGGGCCACGCGGCCAAAAGCGAGATCGGCGCCAGCAACGTCTATCGGTTCGAT CCGGCCAGCAACGCCGTCTCGGCCGTCGTCACCGACATGGTCAAGCCGAACGGCCTCGCCTTCTCACCCGACGAACGCCT GCTCTATGTCGCCGACACCGGAGCAACGCACGTCCCCGACCTGCCAGCCGTCATCCGCGTCTATGACGTGGCGGCAACGG GCACGGAGGTCGGCAAAGGCCGGGTCTTCGCAACCTCGCCAGCCGGCTTCTTCGACGGCTTCCGCGTCGATCGCGGCGGC AACATCTGGACGTCGACTGGCGATGCGGTCGCGATCTACGCGCCCGACGGCATGCTGATCGGCCGCATCCCGGTGCCCGA GATCGTCGCCAACGTCACTTTCGGCGGCCCGAAGCGCAACCGGCTCTACATCACCGCGCAGACGTCGCTCTACGCGATCT TCGTCAACGCCCATGGAACCTAG
Upstream 100 bases:
>100_bases GATGGAGATGTTCGACGGCTCGATCTTCCACACCGTGTTCAAGGCCGACGATTTCCCGCTGCCGACCGACTGATCGCATC TAGCCGGAGAGCTCGACGCC
Downstream 100 bases:
>100_bases ATGGGACTAACTGACGCGACACGATCATTCGGGCGGCGTTCGCGCCGCCCAATATTCCATCAGCGCGGCCTGGTCCATCG CGCCGAGCCCGACCGCCGTG
Product: putative gluconolactonase (gnl)
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSTYDIRDPRFNALIIGHAKLEKLWTGCRWAEGPVYVPAAKSLLWSDIPNDRIMRFDETDGSVSVFETPCGYHNGHTRDA LGRVIACEHGGRRISRLEHDGNWTGLVDQFEGKRFNSPNDAVVKSDGTIWFSDPTYGIDSAYEGHAAKSEIGASNVYRFD PASNAVSAVVTDMVKPNGLAFSPDERLLYVADTGATHVPDLPAVIRVYDVAATGTEVGKGRVFATSPAGFFDGFRVDRGG NIWTSTGDAVAIYAPDGMLIGRIPVPEIVANVTFGGPKRNRLYITAQTSLYAIFVNAHGT
Sequences:
>Translated_300_residues MSTYDIRDPRFNALIIGHAKLEKLWTGCRWAEGPVYVPAAKSLLWSDIPNDRIMRFDETDGSVSVFETPCGYHNGHTRDA LGRVIACEHGGRRISRLEHDGNWTGLVDQFEGKRFNSPNDAVVKSDGTIWFSDPTYGIDSAYEGHAAKSEIGASNVYRFD PASNAVSAVVTDMVKPNGLAFSPDERLLYVADTGATHVPDLPAVIRVYDVAATGTEVGKGRVFATSPAGFFDGFRVDRGG NIWTSTGDAVAIYAPDGMLIGRIPVPEIVANVTFGGPKRNRLYITAQTSLYAIFVNAHGT >Mature_299_residues STYDIRDPRFNALIIGHAKLEKLWTGCRWAEGPVYVPAAKSLLWSDIPNDRIMRFDETDGSVSVFETPCGYHNGHTRDAL GRVIACEHGGRRISRLEHDGNWTGLVDQFEGKRFNSPNDAVVKSDGTIWFSDPTYGIDSAYEGHAAKSEIGASNVYRFDP ASNAVSAVVTDMVKPNGLAFSPDERLLYVADTGATHVPDLPAVIRVYDVAATGTEVGKGRVFATSPAGFFDGFRVDRGGN IWTSTGDAVAIYAPDGMLIGRIPVPEIVANVTFGGPKRNRLYITAQTSLYAIFVNAHGT
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 32589; Mature: 32458
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYDIRDPRFNALIIGHAKLEKLWTGCRWAEGPVYVPAAKSLLWSDIPNDRIMRFDETD CCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCCCCCEEEEECCC GSVSVFETPCGYHNGHTRDALGRVIACEHGGRRISRLEHDGNWTGLVDQFEGKRFNSPND CCEEEEECCCCCCCCCCHHHHCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCC AVVKSDGTIWFSDPTYGIDSAYEGHAAKSEIGASNVYRFDPASNAVSAVVTDMVKPNGLA CEEECCCEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCEE FSPDERLLYVADTGATHVPDLPAVIRVYDVAATGTEVGKGRVFATSPAGFFDGFRVDRGG ECCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCEEECCCC NIWTSTGDAVAIYAPDGMLIGRIPVPEIVANVTFGGPKRNRLYITAQTSLYAIFVNAHGT CEEECCCCEEEEECCCCEEEECCCHHHHHEECCCCCCCCCEEEEEEECEEEEEEEECCCC >Mature Secondary Structure STYDIRDPRFNALIIGHAKLEKLWTGCRWAEGPVYVPAAKSLLWSDIPNDRIMRFDETD CCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCCCCCEEEEECCC GSVSVFETPCGYHNGHTRDALGRVIACEHGGRRISRLEHDGNWTGLVDQFEGKRFNSPND CCEEEEECCCCCCCCCCHHHHCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCC AVVKSDGTIWFSDPTYGIDSAYEGHAAKSEIGASNVYRFDPASNAVSAVVTDMVKPNGLA CEEECCCEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCEE FSPDERLLYVADTGATHVPDLPAVIRVYDVAATGTEVGKGRVFATSPAGFFDGFRVDRGG ECCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCEEECCCC NIWTSTGDAVAIYAPDGMLIGRIPVPEIVANVTFGGPKRNRLYITAQTSLYAIFVNAHGT CEEECCCCEEEEECCCCEEEECCCHHHHHEECCCCCCCCCEEEEEEECEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]