| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343504
Identifier: 146343504
GI number: 146343504
Start: 6996190
End: 6997419
Strand: Reverse
Name: 146343504
Synonym: BRADO6736
Alternate gene names: NA
Gene position: 6997419-6996190 (Counterclockwise)
Preceding gene: 146343505
Following gene: 146343503
Centisome position: 93.84
GC content: 63.17
Gene sequence:
>1230_bases ATGAAAAAGACTCTGACGCGGCGCGATTTCTGCGCCACCGCGCTCGCGACCATCGGTGCCTCGACGATCGCCTCGCCTTA CGTCTGGGCGGCCGAGAAGAAATACGACGCCGGCGCCAGCGACACCGAGATCAAGCTTGGCCAGACCGTGCCGCATTCCG GCCCCGGCTCGCTGTATGGCGTGCTCGGCCGAGTCGGCGAGGCGTATTTCCAGATGCTCAACGAGCAGGGCGGCATCAAC GGCCGCAAGGTCAAGTTCTTCACCATGGACGACGCCTACAGCGCGCCGAAATGCGTCGAGGCGACGCGGCGCCTGGTCGA GCAGGAGGAGGTGCTGGCGCTGTATGGCTCGCTGGGCACCGCGCCGCAGACCGCCGTGCACAAATACCTCAACTCCAAAG GCGTACCGCAACTGCTGCTCAACACCGGCGCCTCGAAGTGGAACGATCCCAAGACCTACAAATGGACCATGGCCGGCCTG CCGCTGTATCCGACCGAGGCGCGCATCCTCGCCAAGCACGTGCTGAGCGTGAAGCCGGAAGCCAAAATCGGCATCCTCTA CCAGAACGACGATTTTGGCCGCGACTTCCTGGGGCCGTTCAAGAAGGTGCTGGCCGATGCCGGCGGCAAGGCCCAGGTGA TCATGGAGCAGACCTATGATCTCACCGAGCCGACGGTCGACTCACAGCTGATCAATCTGTCGAAGTCGGGCGCCGACGTA TTCTACAACATCACCACCGGCAAGGCGACGTCGCAGTCGATCCGGAAAGTGGCCGAGCTCGGCTGGAAGCCGCTGCAGCT GTTGTCGGCGGGCTCGACCGGCCGCTCGATCCTGTCGGCCGCGGGCCTCGAGAACGCCAAGGACATCGTCGCCATCCGCT ATTCCAAGGATGCCGGCGTTCCGCAATGGAAGGACGATCCGGATGTGAAAGGCTTCGAGGCCTTGCGCGCGAAGTATCTG CCCTCGATCGATCCCGACAACACCATTGCCTATGCCGGCTACGGCCAGGCGGTGTCGATGGGCGAGATCCTGCGCCGATG CGGCGACACGCTGACCCGCGAGAACGTGCTCAAGCACGCCACCACGTTGGCCGGTTTCCACTCGCCCTTCTTCCTCGACG GCGTCAATTTCGCCTACACGCCTGACGACTACACGCCGATGAAGACGCTCTACATCTCGATCTTCGACGGCAAGGACTGG AGCATTTCCGAGAAGCCGATGACGGAGTAG
Upstream 100 bases:
>100_bases CTATTGAATGCGCTGCACGCGGCGCTCCATGCGGCAACTTCGCTCTTGCCGCGCGTCTCCCGATGCCAAAAAATGCCATC AGTCTAGGGAGAGACAACAA
Downstream 100 bases:
>100_bases GGCGCGGCTTCCTCTGCTGTCGTCCCGGCCTTGAGCCGGGACCCATAACCACCGGCTTCCGCGAAACGATGACTGGCAGT TGCGCCTTACCGATGGACTG
Product: putative amino-acid ABC transport system, periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKKTLTRRDFCATALATIGASTIASPYVWAAEKKYDAGASDTEIKLGQTVPHSGPGSLYGVLGRVGEAYFQMLNEQGGIN GRKVKFFTMDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNSKGVPQLLLNTGASKWNDPKTYKWTMAGL PLYPTEARILAKHVLSVKPEAKIGILYQNDDFGRDFLGPFKKVLADAGGKAQVIMEQTYDLTEPTVDSQLINLSKSGADV FYNITTGKATSQSIRKVAELGWKPLQLLSAGSTGRSILSAAGLENAKDIVAIRYSKDAGVPQWKDDPDVKGFEALRAKYL PSIDPDNTIAYAGYGQAVSMGEILRRCGDTLTRENVLKHATTLAGFHSPFFLDGVNFAYTPDDYTPMKTLYISIFDGKDW SISEKPMTE
Sequences:
>Translated_409_residues MKKTLTRRDFCATALATIGASTIASPYVWAAEKKYDAGASDTEIKLGQTVPHSGPGSLYGVLGRVGEAYFQMLNEQGGIN GRKVKFFTMDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNSKGVPQLLLNTGASKWNDPKTYKWTMAGL PLYPTEARILAKHVLSVKPEAKIGILYQNDDFGRDFLGPFKKVLADAGGKAQVIMEQTYDLTEPTVDSQLINLSKSGADV FYNITTGKATSQSIRKVAELGWKPLQLLSAGSTGRSILSAAGLENAKDIVAIRYSKDAGVPQWKDDPDVKGFEALRAKYL PSIDPDNTIAYAGYGQAVSMGEILRRCGDTLTRENVLKHATTLAGFHSPFFLDGVNFAYTPDDYTPMKTLYISIFDGKDW SISEKPMTE >Mature_409_residues MKKTLTRRDFCATALATIGASTIASPYVWAAEKKYDAGASDTEIKLGQTVPHSGPGSLYGVLGRVGEAYFQMLNEQGGIN GRKVKFFTMDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNSKGVPQLLLNTGASKWNDPKTYKWTMAGL PLYPTEARILAKHVLSVKPEAKIGILYQNDDFGRDFLGPFKKVLADAGGKAQVIMEQTYDLTEPTVDSQLINLSKSGADV FYNITTGKATSQSIRKVAELGWKPLQLLSAGSTGRSILSAAGLENAKDIVAIRYSKDAGVPQWKDDPDVKGFEALRAKYL PSIDPDNTIAYAGYGQAVSMGEILRRCGDTLTRENVLKHATTLAGFHSPFFLDGVNFAYTPDDYTPMKTLYISIFDGKDW SISEKPMTE
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44643; Mature: 44643
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLTRRDFCATALATIGASTIASPYVWAAEKKYDAGASDTEIKLGQTVPHSGPGSLYG CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHH VLGRVGEAYFQMLNEQGGINGRKVKFFTMDDAYSAPKCVEATRRLVEQEEVLALYGSLGT HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC APQTAVHKYLNSKGVPQLLLNTGASKWNDPKTYKWTMAGLPLYPTEARILAKHVLSVKPE CHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCC AKIGILYQNDDFGRDFLGPFKKVLADAGGKAQVIMEQTYDLTEPTVDSQLINLSKSGADV CEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEE FYNITTGKATSQSIRKVAELGWKPLQLLSAGSTGRSILSAAGLENAKDIVAIRYSKDAGV EEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCC PQWKDDPDVKGFEALRAKYLPSIDPDNTIAYAGYGQAVSMGEILRRCGDTLTRENVLKHA CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH TTLAGFHSPFFLDGVNFAYTPDDYTPMKTLYISIFDGKDWSISEKPMTE HHHHHCCCCEEECCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKKTLTRRDFCATALATIGASTIASPYVWAAEKKYDAGASDTEIKLGQTVPHSGPGSLYG CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHH VLGRVGEAYFQMLNEQGGINGRKVKFFTMDDAYSAPKCVEATRRLVEQEEVLALYGSLGT HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC APQTAVHKYLNSKGVPQLLLNTGASKWNDPKTYKWTMAGLPLYPTEARILAKHVLSVKPE CHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCC AKIGILYQNDDFGRDFLGPFKKVLADAGGKAQVIMEQTYDLTEPTVDSQLINLSKSGADV CEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEE FYNITTGKATSQSIRKVAELGWKPLQLLSAGSTGRSILSAAGLENAKDIVAIRYSKDAGV EEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCC PQWKDDPDVKGFEALRAKYLPSIDPDNTIAYAGYGQAVSMGEILRRCGDTLTRENVLKHA CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH TTLAGFHSPFFLDGVNFAYTPDDYTPMKTLYISIFDGKDWSISEKPMTE HHHHHCCCCEEECCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA