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The map label for this gene is ydeD [C]

Identifier: 146343500

GI number: 146343500

Start: 6990742

End: 6991659

Strand: Reverse

Name: ydeD [C]

Synonym: BRADO6732

Alternate gene names: 146343500

Gene position: 6991659-6990742 (Counterclockwise)

Preceding gene: 146343502

Following gene: 146343494

Centisome position: 93.76

GC content: 66.67

Gene sequence:

>918_bases
ATGTCATCCGTTTCATCTCCGGCTGCCGTGACCCCGATGAAGACGAGCCTGCTGCCGCTTCAGATCGGCCTGTTCTGCCT
GCTGTGGAGCTTCGCGTTCGTCGCCGGCAAGATCGGCGTCACCTATTGCCCGCCGCTCCTGCTGCTCGCCGCGCGGTTCT
CGCTCGCCGGCCTGCTGATCCTGGCCGTTCCCGCGGTCAGGGGCGAGTGGCGCATGAGCTGGCGTGATGCGGCCGTCTTC
GCCATCATCGGCATCGCCAACAACGCCCTCTATCTCGGGCTGGGCTACACGGGCCTGCAGACGGTGTCCGCCGGTCTCGG
CGGCCTGATCGTCTCGGCCAATCCGGTGTTCACCGCGGTGTTCGCCGCGCTGCTGCTCGGCGAGCCGCTGACCCTGCGCA
AGGTCGCGGGGCTGGCGCTCGGCACGCTCGGCGTCGCGATGATCGTCTGGCACCGCATGTCGGTTGGCACTGATCATCTC
CAGGGCATTCTCTACACGCTGGCGGCGCTCGCCTCGATCGTCACCGGCACCATCCTGTTCAAGCAACTCGCGCCGAAGGG
CAGCCTCTGGGTCGGCAACGGCATCCAGAACCTCTCGGCCGGACTCGTGCTGTGGCCGGTCGCGTTTGGCATCTCCAGCG
TTCACGACGTCGTTCCGAATGCGCAGCTGATCGGCGCCTTCGCCTTCCTGGTGCTCGGCGGCTCGATCCTCGCCTATGTG
CTGTGGTTCCATCTTCTGAAAGTGTGCGGCGCCACCGCCGCCAGCGCCTATCATTTCGTGATGCCGCCGCTGGCGATGGT
CTTCGCCTTCCTGGTGCTCGGTGAGCACGTCGCGCTGCAGGACCTGCTGGGCGTCATTCCCGTGGCCATCGGCATCTACC
TGGTCACGCGCGCACCAGCCCAGACACGAGCGTCCTGA

Upstream 100 bases:

>100_bases
TCGGGAACCTCCATTCGAAATTCCACTGAGTTTCAGTCTATCATTTAATTTCCAAATGAGGAAGAACAGCCCTACATCGA
GCGGCAGAAGGAGACCGCCG

Downstream 100 bases:

>100_bases
TTCAGTCGCGCCGGAACACGATCGACGCCATCCATCCGGTCATCAGCGCCATCACGGTCGTGACAAGTCCGTAGACGAAG
CCGTTCTGGCGCGCCGAACT

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSSVSSPAAVTPMKTSLLPLQIGLFCLLWSFAFVAGKIGVTYCPPLLLLAARFSLAGLLILAVPAVRGEWRMSWRDAAVF
AIIGIANNALYLGLGYTGLQTVSAGLGGLIVSANPVFTAVFAALLLGEPLTLRKVAGLALGTLGVAMIVWHRMSVGTDHL
QGILYTLAALASIVTGTILFKQLAPKGSLWVGNGIQNLSAGLVLWPVAFGISSVHDVVPNAQLIGAFAFLVLGGSILAYV
LWFHLLKVCGATAASAYHFVMPPLAMVFAFLVLGEHVALQDLLGVIPVAIGIYLVTRAPAQTRAS

Sequences:

>Translated_305_residues
MSSVSSPAAVTPMKTSLLPLQIGLFCLLWSFAFVAGKIGVTYCPPLLLLAARFSLAGLLILAVPAVRGEWRMSWRDAAVF
AIIGIANNALYLGLGYTGLQTVSAGLGGLIVSANPVFTAVFAALLLGEPLTLRKVAGLALGTLGVAMIVWHRMSVGTDHL
QGILYTLAALASIVTGTILFKQLAPKGSLWVGNGIQNLSAGLVLWPVAFGISSVHDVVPNAQLIGAFAFLVLGGSILAYV
LWFHLLKVCGATAASAYHFVMPPLAMVFAFLVLGEHVALQDLLGVIPVAIGIYLVTRAPAQTRAS
>Mature_304_residues
SSVSSPAAVTPMKTSLLPLQIGLFCLLWSFAFVAGKIGVTYCPPLLLLAARFSLAGLLILAVPAVRGEWRMSWRDAAVFA
IIGIANNALYLGLGYTGLQTVSAGLGGLIVSANPVFTAVFAALLLGEPLTLRKVAGLALGTLGVAMIVWHRMSVGTDHLQ
GILYTLAALASIVTGTILFKQLAPKGSLWVGNGIQNLSAGLVLWPVAFGISSVHDVVPNAQLIGAFAFLVLGGSILAYVL
WFHLLKVCGATAASAYHFVMPPLAMVFAFLVLGEHVALQDLLGVIPVAIGIYLVTRAPAQTRAS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31845; Mature: 31713

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVSSPAAVTPMKTSLLPLQIGLFCLLWSFAFVAGKIGVTYCPPLLLLAARFSLAGLLI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAVPAVRGEWRMSWRDAAVFAIIGIANNALYLGLGYTGLQTVSAGLGGLIVSANPVFTAV
HHHHHCCCCCCCCHHHHHHHHEEEECCCEEEEEECHHHHHHHHHCCCCEEEECCHHHHHH
FAALLLGEPLTLRKVAGLALGTLGVAMIVWHRMSVGTDHLQGILYTLAALASIVTGTILF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KQLAPKGSLWVGNGIQNLSAGLVLWPVAFGISSVHDVVPNAQLIGAFAFLVLGGSILAYV
HHHCCCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LWFHLLKVCGATAASAYHFVMPPLAMVFAFLVLGEHVALQDLLGVIPVAIGIYLVTRAPA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCH
QTRAS
HCCCC
>Mature Secondary Structure 
SSVSSPAAVTPMKTSLLPLQIGLFCLLWSFAFVAGKIGVTYCPPLLLLAARFSLAGLLI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAVPAVRGEWRMSWRDAAVFAIIGIANNALYLGLGYTGLQTVSAGLGGLIVSANPVFTAV
HHHHHCCCCCCCCHHHHHHHHEEEECCCEEEEEECHHHHHHHHHCCCCEEEECCHHHHHH
FAALLLGEPLTLRKVAGLALGTLGVAMIVWHRMSVGTDHLQGILYTLAALASIVTGTILF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KQLAPKGSLWVGNGIQNLSAGLVLWPVAFGISSVHDVVPNAQLIGAFAFLVLGGSILAYV
HHHCCCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LWFHLLKVCGATAASAYHFVMPPLAMVFAFLVLGEHVALQDLLGVIPVAIGIYLVTRAPA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCH
QTRAS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]