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The map label for this gene is ccdA [H]

Identifier: 146343483

GI number: 146343483

Start: 6971478

End: 6972194

Strand: Reverse

Name: ccdA [H]

Synonym: BRADO6715

Alternate gene names: 146343483

Gene position: 6972194-6971478 (Counterclockwise)

Preceding gene: 146343484

Following gene: 146343479

Centisome position: 93.5

GC content: 70.29

Gene sequence:

>717_bases
ATGCTCGCGCTGGCGCTGGCCTTCGTGGCCGGCCTGCTCTCGATCCTGTCGCCCTGCGTGCTGCCGCTGGTGCCGATCGT
GCTCGGTGCCGCGGCATCAGCGCATCCACGCGGCGCGCTGGCGCTGGCGGGAGGGCTGGCGCTGTCCTTCACCGGCCTCG
GTCTGTTCATTGCGCTCGCAGGCAATGGGCTCGGTCTCGACGCCGGCGCCTTCCGCCTCGTCGCGGCGGTGCTGATGCTG
GTGATCGGTGTCGTCCTGCTGGTGCCGTCGTGGCAGGCGCAGTTCGCCGTCGCCGGCGGTCCGGTGCAGCGCTGGGCCGA
CAGGCACTCCCAGGGATTCGCGTCGTCAGGGGCCGGCGGTCAGTTCTTGATCGGACTCCTGCTCGGTGCGGTCTGGTCGC
CTTGCGTCGGCCCGACGCTGGGAGCCGCCTCGCTGCTCGCCGCGCAAGGCCGCGATCTCGTTCGCGTGACGCTGACGATG
CTGGCATTCGGCCTGGGTGCCGGTCTGCCGCTGATTCTGCTCGGCCTGTTGTCTCGGACCACCATGATGCGCCTGCGCGC
ACGGCTGCTGTCGGCCGGCAAGCTCGGCAAGATGCTGATGGGCGCGGCGTTTGTGGGGCTGGCGGCCGCGATCCTGAGCG
GGGCCGACAAGCAGCTGGAAGCTTGGCTGGTGGAGCAATCTCCGGCGTGGCTCACCACGCTGACAACGTCGATCTAG

Upstream 100 bases:

>100_bases
GCTGATCGTGTTCAAGGGGACCAGCGAGACCGGCCGCTCCGTCGGCGACACCAAGGAAGCCTCGATCGCGGCGCTGCTCG
ACAAGAGCCTGTAGCGCACC

Downstream 100 bases:

>100_bases
CGAGTGTGGCGCAACAGTCGCAACAAACTCGCTGTCATTCCGGGGCGGCTCGCGCTACGCGCGCCCCGGAATGACGACTG
GAGAGAGCTGTTGCGACCCC

Product: putative cytochrome c-type biogenesis protein membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLALALAFVAGLLSILSPCVLPLVPIVLGAAASAHPRGALALAGGLALSFTGLGLFIALAGNGLGLDAGAFRLVAAVLML
VIGVVLLVPSWQAQFAVAGGPVQRWADRHSQGFASSGAGGQFLIGLLLGAVWSPCVGPTLGAASLLAAQGRDLVRVTLTM
LAFGLGAGLPLILLGLLSRTTMMRLRARLLSAGKLGKMLMGAAFVGLAAAILSGADKQLEAWLVEQSPAWLTTLTTSI

Sequences:

>Translated_238_residues
MLALALAFVAGLLSILSPCVLPLVPIVLGAAASAHPRGALALAGGLALSFTGLGLFIALAGNGLGLDAGAFRLVAAVLML
VIGVVLLVPSWQAQFAVAGGPVQRWADRHSQGFASSGAGGQFLIGLLLGAVWSPCVGPTLGAASLLAAQGRDLVRVTLTM
LAFGLGAGLPLILLGLLSRTTMMRLRARLLSAGKLGKMLMGAAFVGLAAAILSGADKQLEAWLVEQSPAWLTTLTTSI
>Mature_238_residues
MLALALAFVAGLLSILSPCVLPLVPIVLGAAASAHPRGALALAGGLALSFTGLGLFIALAGNGLGLDAGAFRLVAAVLML
VIGVVLLVPSWQAQFAVAGGPVQRWADRHSQGFASSGAGGQFLIGLLLGAVWSPCVGPTLGAASLLAAQGRDLVRVTLTM
LAFGLGAGLPLILLGLLSRTTMMRLRARLLSAGKLGKMLMGAAFVGLAAAILSGADKQLEAWLVEQSPAWLTTLTTSI

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 23966; Mature: 23966

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALALAFVAGLLSILSPCVLPLVPIVLGAAASAHPRGALALAGGLALSFTGLGLFIALA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GNGLGLDAGAFRLVAAVLMLVIGVVLLVPSWQAQFAVAGGPVQRWADRHSQGFASSGAGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCH
QFLIGLLLGAVWSPCVGPTLGAASLLAAQGRDLVRVTLTMLAFGLGAGLPLILLGLLSRT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TMMRLRARLLSAGKLGKMLMGAAFVGLAAAILSGADKQLEAWLVEQSPAWLTTLTTSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MLALALAFVAGLLSILSPCVLPLVPIVLGAAASAHPRGALALAGGLALSFTGLGLFIALA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GNGLGLDAGAFRLVAAVLMLVIGVVLLVPSWQAQFAVAGGPVQRWADRHSQGFASSGAGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCH
QFLIGLLLGAVWSPCVGPTLGAASLLAAQGRDLVRVTLTMLAFGLGAGLPLILLGLLSRT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TMMRLRARLLSAGKLGKMLMGAAFVGLAAAILSGADKQLEAWLVEQSPAWLTTLTTSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]