Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343404
Identifier: 146343404
GI number: 146343404
Start: 6887283
End: 6887477
Strand: Reverse
Name: 146343404
Synonym: BRADO6633
Alternate gene names: NA
Gene position: 6887477-6887283 (Counterclockwise)
Preceding gene: 146343405
Following gene: 146343401
Centisome position: 92.37
GC content: 67.69
Gene sequence:
>195_bases ATGTCCGACGAATCAACCCGCTCCACCACCGCGCCCGCCAAACCCATCCGACGCTGCCCGATCTGCAACCGGCCGGCTGC CGAAGCCTCGCGCCCGTTCTGCTCGCCGCGCTGCCGCGACGTCGACCTCAATCGCTGGCTCAGCGGCTCTTATGTCATCC CGGCCACCGAAGGCGACGAGGACGACGTCGAATAG
Upstream 100 bases:
>100_bases CGGCGAGGGCTTTCCGATCCGCTTCGGCTGGCTGAACACCGTCGGCGTCTGAGTCGGCTGAAGGGATGCGCTGGACGTTC TGGGCGCCTAAATAGCGGCC
Downstream 100 bases:
>100_bases AGCAGCGTTTTCATGGTGTTGCGCCGGTGGTGGCGGCCGTCGCAAGGGCCGCTGCGCATCTGCAAAAGGAATGTGAAAAC TTCGCGTCTCGGCGGTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MSDESTRSTTAPAKPIRRCPICNRPAAEASRPFCSPRCRDVDLNRWLSGSYVIPATEGDEDDVE
Sequences:
>Translated_64_residues MSDESTRSTTAPAKPIRRCPICNRPAAEASRPFCSPRCRDVDLNRWLSGSYVIPATEGDEDDVE >Mature_63_residues SDESTRSTTAPAKPIRRCPICNRPAAEASRPFCSPRCRDVDLNRWLSGSYVIPATEGDEDDVE
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005584 - InterPro: IPR013088 [H]
Pfam domain/function: PF03884 DUF329 [H]
EC number: NA
Molecular weight: Translated: 7098; Mature: 6967
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDESTRSTTAPAKPIRRCPICNRPAAEASRPFCSPRCRDVDLNRWLSGSYVIPATEGDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC DDVE CCCC >Mature Secondary Structure SDESTRSTTAPAKPIRRCPICNRPAAEASRPFCSPRCRDVDLNRWLSGSYVIPATEGDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC DDVE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]