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The map label for this gene is dan [H]

Identifier: 146343381

GI number: 146343381

Start: 6859344

End: 6860804

Strand: Reverse

Name: dan [H]

Synonym: BRADO6610

Alternate gene names: 146343381

Gene position: 6860804-6859344 (Counterclockwise)

Preceding gene: 146343383

Following gene: 146343379

Centisome position: 92.01

GC content: 67.9

Gene sequence:

>1461_bases
ATGACCAATGACCCGACCTCCTTCGATCTCATCATCCGCGGCGGCACTGTCATCGACGGCACGCGCGCGCCGCGCTTTGC
GGCGGATGTCGGCATCAAGGACGGCCGCATCGTCGCCATCGGCGAGGTCTCAGGCGAAGCTCGGCGCGTGATCGACGCCT
CCGGCCGCATCGTCGCGCCGGGCTTCATCGATGCCCATACCCATGACGACAGCGCGGTGCTGGTCGATCCCGGCATGACC
TGCAAGGTGTCACAGGGCGTGACCTCCGTCGTGACGGGCAATTGCGGCGTCAGCATCGCGCCGCTGAAGCCGGGCTCGCC
GCGACCGATGCCGCTCGGCCTGCTGTCACCGGGCGACGGGCGCGTTGCGGAATATGCCTCGTTCGCGGACTACGTCGCGG
CGTTGCGCGCGGCGCCATCGGCGGTGAACGTCGCGCCGATGACCGGCCATACCTCGCTGCGCGCGTCCGTCGTGAGCGAT
CTCGGCCGCGCGGCGACCGAGAGCGAAGTTGCCGAGATGCGCGCCTTGGTTCAGGAGGCGCTCGATGCCGGCGCGATCGG
CGTCTCTACCGGCACCTTCTATCCGCCGGCGGAGGCCGCGCCGACCGAGGAGATCATCGAGGTCTGCCGTCCGCTGACCG
GCAGCGGCGGCGTCTATGCCACGCATATGCGCAACGAGGCTGATGACGTCGTCAAATCGCTGGAGGAGAGCTTTGCAATT
GGCAAGGCGCTCGACGTCCAGGTCGTGATCTCGCACCACAAGGTGGTGGGGCCGGCGAATTTCGGCCGCACGAAAGAGAC
GCTGCCGTTGCTCACCGAGGCGATGAGCTGCCAATGCGTCGCGCTCGACTGCTATCCTTATAACGCATCCTCGACGATGC
TGCACACCGATCCGGCCAAGCTGCAGGTCAAGGTCGTGGTTGCCGCGTCGAAGCCGCATCCGGAGATGGCGGGCCGTGAT
CTCGCCGACATCGCCGCCAGCTGGGGCGTCGACCGGCTCGAAGCCGCGAAGCGGCTGCAGCCGGCATCGGCCATCTACTT
CTCGATGGACGAGGCGGACGTGCGCACCATCCTCGCCTTCGAGCCGACCATGATCGGCTCCGACGGTCTCCCGTTCGGCG
AGCGGCCGCATCCGCGCCTGTGGGGCACGTTCCCACGCGTGCTCGGCTATTACTGCCGCGAGCTCGAGCTGTTCTCACTG
GAGACGGCGGTTTGGAAGATGAGCGGCCTTACCGCGCAGAATTTCGGCATCAAGCGCCGCGGCACGCTGGCCGTCGGCCA
CCATGCCGACATCACGATCTTCGACGCGGCCAGCGTGCGCGACGCTGCGACCTATGACGAGCCCTGCGTGCCCGCTGCCG
GCATCGACGCGGTCGTCGTCAACGGCGCGCTGACGTGGTGGCAGGGGGCGCACCAGAATGCGCGCGCTGGGCAGGTGATC
ACGCGGGCACGTCTGCGCTGA

Upstream 100 bases:

>100_bases
GGTGAATGCAGTTCAGCCCGGCGCGGATGACATGCGGATGAAGCTGGACGCGCTGTAATAGCTCCAGGATAGTTCTGTGG
TTTCCAGCGAGACCTAGCTC

Downstream 100 bases:

>100_bases
TCAGGGCCGCGGCTGCGCCGTCGATCCGCGGATGATGAGCTGCGGCGCCAGCACGACATGCTCGTCCGTGACCTCATGGC
GCGCAATGCGCGCCAGCAGC

Product: D-aminoacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MTNDPTSFDLIIRGGTVIDGTRAPRFAADVGIKDGRIVAIGEVSGEARRVIDASGRIVAPGFIDAHTHDDSAVLVDPGMT
CKVSQGVTSVVTGNCGVSIAPLKPGSPRPMPLGLLSPGDGRVAEYASFADYVAALRAAPSAVNVAPMTGHTSLRASVVSD
LGRAATESEVAEMRALVQEALDAGAIGVSTGTFYPPAEAAPTEEIIEVCRPLTGSGGVYATHMRNEADDVVKSLEESFAI
GKALDVQVVISHHKVVGPANFGRTKETLPLLTEAMSCQCVALDCYPYNASSTMLHTDPAKLQVKVVVAASKPHPEMAGRD
LADIAASWGVDRLEAAKRLQPASAIYFSMDEADVRTILAFEPTMIGSDGLPFGERPHPRLWGTFPRVLGYYCRELELFSL
ETAVWKMSGLTAQNFGIKRRGTLAVGHHADITIFDAASVRDAATYDEPCVPAAGIDAVVVNGALTWWQGAHQNARAGQVI
TRARLR

Sequences:

>Translated_486_residues
MTNDPTSFDLIIRGGTVIDGTRAPRFAADVGIKDGRIVAIGEVSGEARRVIDASGRIVAPGFIDAHTHDDSAVLVDPGMT
CKVSQGVTSVVTGNCGVSIAPLKPGSPRPMPLGLLSPGDGRVAEYASFADYVAALRAAPSAVNVAPMTGHTSLRASVVSD
LGRAATESEVAEMRALVQEALDAGAIGVSTGTFYPPAEAAPTEEIIEVCRPLTGSGGVYATHMRNEADDVVKSLEESFAI
GKALDVQVVISHHKVVGPANFGRTKETLPLLTEAMSCQCVALDCYPYNASSTMLHTDPAKLQVKVVVAASKPHPEMAGRD
LADIAASWGVDRLEAAKRLQPASAIYFSMDEADVRTILAFEPTMIGSDGLPFGERPHPRLWGTFPRVLGYYCRELELFSL
ETAVWKMSGLTAQNFGIKRRGTLAVGHHADITIFDAASVRDAATYDEPCVPAAGIDAVVVNGALTWWQGAHQNARAGQVI
TRARLR
>Mature_485_residues
TNDPTSFDLIIRGGTVIDGTRAPRFAADVGIKDGRIVAIGEVSGEARRVIDASGRIVAPGFIDAHTHDDSAVLVDPGMTC
KVSQGVTSVVTGNCGVSIAPLKPGSPRPMPLGLLSPGDGRVAEYASFADYVAALRAAPSAVNVAPMTGHTSLRASVVSDL
GRAATESEVAEMRALVQEALDAGAIGVSTGTFYPPAEAAPTEEIIEVCRPLTGSGGVYATHMRNEADDVVKSLEESFAIG
KALDVQVVISHHKVVGPANFGRTKETLPLLTEAMSCQCVALDCYPYNASSTMLHTDPAKLQVKVVVAASKPHPEMAGRDL
ADIAASWGVDRLEAAKRLQPASAIYFSMDEADVRTILAFEPTMIGSDGLPFGERPHPRLWGTFPRVLGYYCRELELFSLE
TAVWKMSGLTAQNFGIKRRGTLAVGHHADITIFDAASVRDAATYDEPCVPAAGIDAVVVNGALTWWQGAHQNARAGQVIT
RARLR

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

Organism=Escherichia coli, GI1786722, Length=62, Percent_Identity=53.2258064516129, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 51369; Mature: 51238

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDPTSFDLIIRGGTVIDGTRAPRFAADVGIKDGRIVAIGEVSGEARRVIDASGRIVAP
CCCCCCCEEEEEECCEEEECCCCCCCHHHCCCCCCEEEEEECCCCCHHHEEECCCCEECC
GFIDAHTHDDSAVLVDPGMTCKVSQGVTSVVTGNCGVSIAPLKPGSPRPMPLGLLSPGDG
CEEECCCCCCCEEEECCCCEEEECCCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCC
RVAEYASFADYVAALRAAPSAVNVAPMTGHTSLRASVVSDLGRAATESEVAEMRALVQEA
CHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDAGAIGVSTGTFYPPAEAAPTEEIIEVCRPLTGSGGVYATHMRNEADDVVKSLEESFAI
HCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
GKALDVQVVISHHKVVGPANFGRTKETLPLLTEAMSCQCVALDCYPYNASSTMLHTDPAK
CCCEEEEEEEECCEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEECCCCE
LQVKVVVAASKPHPEMAGRDLADIAASWGVDRLEAAKRLQPASAIYFSMDEADVRTILAF
EEEEEEEEECCCCHHHCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
EPTMIGSDGLPFGERPHPRLWGTFPRVLGYYCRELELFSLETAVWKMSGLTAQNFGIKRR
CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEHHHHHHHHCCCEECCCCCCCC
GTLAVGHHADITIFDAASVRDAATYDEPCVPAAGIDAVVVNGALTWWQGAHQNARAGQVI
CEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCHHH
TRARLR
HHHHCC
>Mature Secondary Structure 
TNDPTSFDLIIRGGTVIDGTRAPRFAADVGIKDGRIVAIGEVSGEARRVIDASGRIVAP
CCCCCCEEEEEECCEEEECCCCCCCHHHCCCCCCEEEEEECCCCCHHHEEECCCCEECC
GFIDAHTHDDSAVLVDPGMTCKVSQGVTSVVTGNCGVSIAPLKPGSPRPMPLGLLSPGDG
CEEECCCCCCCEEEECCCCEEEECCCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCC
RVAEYASFADYVAALRAAPSAVNVAPMTGHTSLRASVVSDLGRAATESEVAEMRALVQEA
CHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDAGAIGVSTGTFYPPAEAAPTEEIIEVCRPLTGSGGVYATHMRNEADDVVKSLEESFAI
HCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
GKALDVQVVISHHKVVGPANFGRTKETLPLLTEAMSCQCVALDCYPYNASSTMLHTDPAK
CCCEEEEEEEECCEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEECCCCE
LQVKVVVAASKPHPEMAGRDLADIAASWGVDRLEAAKRLQPASAIYFSMDEADVRTILAF
EEEEEEEEECCCCHHHCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
EPTMIGSDGLPFGERPHPRLWGTFPRVLGYYCRELELFSLETAVWKMSGLTAQNFGIKRR
CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEHHHHHHHHCCCEECCCCCCCC
GTLAVGHHADITIFDAASVRDAATYDEPCVPAAGIDAVVVNGALTWWQGAHQNARAGQVI
CEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCHHH
TRARLR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]