Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is bcsP31 [H]
Identifier: 146343370
GI number: 146343370
Start: 6848350
End: 6849312
Strand: Reverse
Name: bcsP31 [H]
Synonym: BRADO6598
Alternate gene names: 146343370
Gene position: 6849312-6848350 (Counterclockwise)
Preceding gene: 146343371
Following gene: 146343369
Centisome position: 91.86
GC content: 63.66
Gene sequence:
>963_bases ATGCGTTTCTCGAAACTCTTTGGCACTGCAACCGGATTGTTCCTGGCCGTCACCAGCCTTCTTGCGGCCCCTGCGGCACA GGCGCAGAGCTTCATCAATGTGCTTACCGGCGGCACCTCCGGCGTCTATTATCCGCTGGGCGTCGCAATCGGGAAGATCT ACGGCGACAAGATCCCGAACGTGAAGACCCAGGTGCAGGCGACCAAGGCCTCGGTCGAGAACTTGATCCTGCTGCAGCAG GGCCGCGGCGAGCTCGCCTTCGCGCTCGGCGACTCCCTCAAGTCGGCCTGGAACGGCGAGGAGGAGGCGGGCTTCAAGTC CAAGCTCGACAAGCTGCGCACCATCGGCGCGATCTATCCGAACTACATCCAGATCGTCGCGACCGCCGAGTCCGGCATCA AGACGCTGGCTGATCTGAAGGGCAAGAGCCTGTCGGTCGGCGCGCCGAAGTCGGGCACCGAGCTGAACTCGCGCGCGATC CTCGCTGCCGCCGGCATGAGCTACAAGGATCTCGGCAAGGTCGAATATCTGCCGTTCGCCGAATCCGTCGACCTGATGAA GAACCGGCAACTCGGAGCCACCTTGCAATCGGCCGGCCTCGGCGTCGCCTCGCTGAAGGACCTGTCGACCTCGTCGCCGA TCACCGTGGTGTCGGTGCCGAAGGAGGTGGTCGACAAGATCGGCGCGCCGTTTGTGGCGGCGACCATCCCGGCCAACACC TATACCGGCCAGGACAAGGACGTGCCGACCGCGGCGGTGATCAACTATCTCGTCACCAGCTCGGCCGTGTCCGATGATCT CGCCTATCAGATGACCAAGCTGATCTTCGAGTCGCTGCCGGAACTCGCCAACGCGCACGCGGCCGGCAAGGAGATCAAGC TGGAGACGGCGGCACAGGACAGTCCGGTGCCGCTGCACCCGGGCGCGATCCGCTACTACAAGGAAAAGGGCGTCCTGAAG TAA
Upstream 100 bases:
>100_bases CCACGGCCCGCCGCCGCGGCGCGCGGCCGCCCGTCTTTCGGATGGGTTGACCCGACGCATGCATCCGTCCAATTTGCCGG CAAAATCAATGGGAGGACAG
Downstream 100 bases:
>100_bases GGACGCCGCCTGCGCCGCCCGAAGGCCGGCTCGTTTCCAAAATCGACTGCGCGGGCTCCCGCGCAGTCTTCTCGTTTCAG GTAGCCGCGGCCGATGGGCG
Product: putative TRAP-type transport system, periplasmic component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRFSKLFGTATGLFLAVTSLLAAPAAQAQSFINVLTGGTSGVYYPLGVAIGKIYGDKIPNVKTQVQATKASVENLILLQQ GRGELAFALGDSLKSAWNGEEEAGFKSKLDKLRTIGAIYPNYIQIVATAESGIKTLADLKGKSLSVGAPKSGTELNSRAI LAAAGMSYKDLGKVEYLPFAESVDLMKNRQLGATLQSAGLGVASLKDLSTSSPITVVSVPKEVVDKIGAPFVAATIPANT YTGQDKDVPTAAVINYLVTSSAVSDDLAYQMTKLIFESLPELANAHAAGKEIKLETAAQDSPVPLHPGAIRYYKEKGVLK
Sequences:
>Translated_320_residues MRFSKLFGTATGLFLAVTSLLAAPAAQAQSFINVLTGGTSGVYYPLGVAIGKIYGDKIPNVKTQVQATKASVENLILLQQ GRGELAFALGDSLKSAWNGEEEAGFKSKLDKLRTIGAIYPNYIQIVATAESGIKTLADLKGKSLSVGAPKSGTELNSRAI LAAAGMSYKDLGKVEYLPFAESVDLMKNRQLGATLQSAGLGVASLKDLSTSSPITVVSVPKEVVDKIGAPFVAATIPANT YTGQDKDVPTAAVINYLVTSSAVSDDLAYQMTKLIFESLPELANAHAAGKEIKLETAAQDSPVPLHPGAIRYYKEKGVLK >Mature_320_residues MRFSKLFGTATGLFLAVTSLLAAPAAQAQSFINVLTGGTSGVYYPLGVAIGKIYGDKIPNVKTQVQATKASVENLILLQQ GRGELAFALGDSLKSAWNGEEEAGFKSKLDKLRTIGAIYPNYIQIVATAESGIKTLADLKGKSLSVGAPKSGTELNSRAI LAAAGMSYKDLGKVEYLPFAESVDLMKNRQLGATLQSAGLGVASLKDLSTSSPITVVSVPKEVVDKIGAPFVAATIPANT YTGQDKDVPTAAVINYLVTSSAVSDDLAYQMTKLIFESLPELANAHAAGKEIKLETAAQDSPVPLHPGAIRYYKEKGVLK
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33584; Mature: 33584
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSKLFGTATGLFLAVTSLLAAPAAQAQSFINVLTGGTSGVYYPLGVAIGKIYGDKIPN CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCC VKTQVQATKASVENLILLQQGRGELAFALGDSLKSAWNGEEEAGFKSKLDKLRTIGAIYP CHHHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCC NYIQIVATAESGIKTLADLKGKSLSVGAPKSGTELNSRAILAAAGMSYKDLGKVEYLPFA CCEEEEEECHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHCCCEEECCCH ESVDLMKNRQLGATLQSAGLGVASLKDLSTSSPITVVSVPKEVVDKIGAPFVAATIPANT HHHHHHHCCCCCCHHHHCCCCHHHHHHCCCCCCEEEEECCHHHHHHCCCCEEEEECCCCC YTGQDKDVPTAAVINYLVTSSAVSDDLAYQMTKLIFESLPELANAHAAGKEIKLETAAQD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC SPVPLHPGAIRYYKEKGVLK CCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure MRFSKLFGTATGLFLAVTSLLAAPAAQAQSFINVLTGGTSGVYYPLGVAIGKIYGDKIPN CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCC VKTQVQATKASVENLILLQQGRGELAFALGDSLKSAWNGEEEAGFKSKLDKLRTIGAIYP CHHHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCC NYIQIVATAESGIKTLADLKGKSLSVGAPKSGTELNSRAILAAAGMSYKDLGKVEYLPFA CCEEEEEECHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHCCCEEECCCH ESVDLMKNRQLGATLQSAGLGVASLKDLSTSSPITVVSVPKEVVDKIGAPFVAATIPANT HHHHHHHCCCCCCHHHHCCCCHHHHHHCCCCCCEEEEECCHHHHHHCCCCEEEEECCCCC YTGQDKDVPTAAVINYLVTSSAVSDDLAYQMTKLIFESLPELANAHAAGKEIKLETAAQD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC SPVPLHPGAIRYYKEKGVLK CCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]