| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343341
Identifier: 146343341
GI number: 146343341
Start: 6816501
End: 6817292
Strand: Reverse
Name: 146343341
Synonym: BRADO6567
Alternate gene names: NA
Gene position: 6817292-6816501 (Counterclockwise)
Preceding gene: 146343342
Following gene: 146343339
Centisome position: 91.43
GC content: 70.33
Gene sequence:
>792_bases GTGGGACAGCGTGCGCTGATGCGGCCGATCTTTCGCGTCACGGACAGTCAGGTCGCCGTCAGTCCCGATGCCGCCGGTCC CTGGGATCCGACCATGCAGCACGGCTCGGCGCCCTCGGCGCTCGCGGTGTGGGCGGCCGAGCGCATCCCGACGAAGTCGC CGATGCGCATCGCCCGCGTCACCATCGACCTGATGCGCCCGGTGCCGCTCGCCCAGCTCGACGTCGAGACGGAGGTGCTG CGCGAGGGCCGCAAGATCCAGCTCTGCGCGGTGCGCCTGCGCGCCGGCAACACCGTCGTCGTCACCGCGACCGTGTTGAA GATCAGGCAGGACGCGGTGCCGCTGCCGGACGATGTCCACGAACTGCCGGTCGATCTCGCCGGCCCGGATCAGGCGCAGC CCGAGCCGGCCGATTTCTCCACCAGCCCCTTCGTCCGCGGCATGACCTTGCGCGCCGCCCGCGGCCGCTTCGGCGTCCGC GGCCCCGGCGCGATCTGGTATCGCGTCGACTGGCCGCTGGTCGAGGGCCACGCGGTGTCACAGGCGATGCGCGCGGTGGT GGCCAGCGATTTCTGCAACGGAACGTCGGCCGCGCTCGACTTCCACAGCTACACGTTCCTCAACGCCGACCTCACCGTCA ACATGGCCCGCGAGCCGGTCGGCGACTGGATTTTGCTCGACGCCGAAAGCTGGATCGGCCCCGATGGCGCCGGACTCGCA ATGGCGCGGCTCGGCGATGCGAAGGGTTATTTCGGCCGCGTGGTGCAGAGCCTGGTGATCGAGAAGCGGTGA
Upstream 100 bases:
>100_bases CATCGTCCGCATGGACCGGGGAAAGCATGTCTCGACGCTCGAGGTCGACATCGAACTGCCCAACGGCGCCGATCGCGCCT TCGCCAGCGCGGGCTGAAAC
Downstream 100 bases:
>100_bases GGCCGTGACGGTGCGCTCCCCTCCCCGCAAGGGGGAGGGGAGTTCACCGTCGTTGGGTTGAGAGCGGGGTAAGCAACTCA CAAAGCTAGCGCCCTTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MGQRALMRPIFRVTDSQVAVSPDAAGPWDPTMQHGSAPSALAVWAAERIPTKSPMRIARVTIDLMRPVPLAQLDVETEVL REGRKIQLCAVRLRAGNTVVVTATVLKIRQDAVPLPDDVHELPVDLAGPDQAQPEPADFSTSPFVRGMTLRAARGRFGVR GPGAIWYRVDWPLVEGHAVSQAMRAVVASDFCNGTSAALDFHSYTFLNADLTVNMAREPVGDWILLDAESWIGPDGAGLA MARLGDAKGYFGRVVQSLVIEKR
Sequences:
>Translated_263_residues MGQRALMRPIFRVTDSQVAVSPDAAGPWDPTMQHGSAPSALAVWAAERIPTKSPMRIARVTIDLMRPVPLAQLDVETEVL REGRKIQLCAVRLRAGNTVVVTATVLKIRQDAVPLPDDVHELPVDLAGPDQAQPEPADFSTSPFVRGMTLRAARGRFGVR GPGAIWYRVDWPLVEGHAVSQAMRAVVASDFCNGTSAALDFHSYTFLNADLTVNMAREPVGDWILLDAESWIGPDGAGLA MARLGDAKGYFGRVVQSLVIEKR >Mature_262_residues GQRALMRPIFRVTDSQVAVSPDAAGPWDPTMQHGSAPSALAVWAAERIPTKSPMRIARVTIDLMRPVPLAQLDVETEVLR EGRKIQLCAVRLRAGNTVVVTATVLKIRQDAVPLPDDVHELPVDLAGPDQAQPEPADFSTSPFVRGMTLRAARGRFGVRG PGAIWYRVDWPLVEGHAVSQAMRAVVASDFCNGTSAALDFHSYTFLNADLTVNMAREPVGDWILLDAESWIGPDGAGLAM ARLGDAKGYFGRVVQSLVIEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28530; Mature: 28399
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQRALMRPIFRVTDSQVAVSPDAAGPWDPTMQHGSAPSALAVWAAERIPTKSPMRIARV CCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCCCCCEEEEE TIDLMRPVPLAQLDVETEVLREGRKIQLCAVRLRAGNTVVVTATVLKIRQDAVPLPDDVH HHHHHCCCCCHHCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEEEEHHHHCCCCCCCCHH ELPVDLAGPDQAQPEPADFSTSPFVRGMTLRAARGRFGVRGPGAIWYRVDWPLVEGHAVS HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCEECCHHHH QAMRAVVASDFCNGTSAALDFHSYTFLNADLTVNMAREPVGDWILLDAESWIGPDGAGLA HHHHHHHHHHCCCCCHHEEEECEEEEEECCEEEEECCCCCCCEEEEECHHHCCCCCCCCC MARLGDAKGYFGRVVQSLVIEKR EEHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GQRALMRPIFRVTDSQVAVSPDAAGPWDPTMQHGSAPSALAVWAAERIPTKSPMRIARV CCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCCCCCEEEEE TIDLMRPVPLAQLDVETEVLREGRKIQLCAVRLRAGNTVVVTATVLKIRQDAVPLPDDVH HHHHHCCCCCHHCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEEEEHHHHCCCCCCCCHH ELPVDLAGPDQAQPEPADFSTSPFVRGMTLRAARGRFGVRGPGAIWYRVDWPLVEGHAVS HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCEECCHHHH QAMRAVVASDFCNGTSAALDFHSYTFLNADLTVNMAREPVGDWILLDAESWIGPDGAGLA HHHHHHHHHHCCCCCHHEEEECEEEEEECCEEEEECCCCCCCEEEEECHHHCCCCCCCCC MARLGDAKGYFGRVVQSLVIEKR EEHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA