| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343229
Identifier: 146343229
GI number: 146343229
Start: 6699437
End: 6700804
Strand: Reverse
Name: 146343229
Synonym: BRADO6448
Alternate gene names: NA
Gene position: 6700804-6699437 (Counterclockwise)
Preceding gene: 146343230
Following gene: 146343224
Centisome position: 89.86
GC content: 55.04
Gene sequence:
>1368_bases ATGCCCGCAATAACTGATAGGCTTACGGACGTCTCCGAAGAAAATCTCTTGGAGATGATCAAGAGTTTCAAGGAGGTTGA TGAGGCGGACATAGTTACTGCGTTTCGAGACAGCAATGGGAAATTCAACGTTGACTCGACGGTGGTGGTTGTCGACCGTC CAACAGATGTCTCAGGCACGCCGCTTACCATTGCCGGTAAAATATCGATCTTCGGCGGTCCGGACGATACTGGCGTCGGT GACGATGAAGGTCTGGCGTTGTTATCGGCTGCCGATGTTCCGAACTTCCCCGATATCTTTTTGCCCGACCAGCCAGTCGG CACGACGGGGCTCGCGCGGCGACTGAATCCGAATGCGAACTACATAGCGTGCCGATGGGACTATGTGGCCACGCCTAAGG ACTATCTCAGACGGCACAAGGTGAAGGTCACCGCCAGCGATACGACTATCGAGGCGCAGCCGGTTGATTTCGGTCCTGAT CCATCGACCGGGCGATCGATCGATCTATCTCCGGCGTTGGCTAAGGCCTTGAAGCTCAAGACCGACGATCTTTGCACCGT TCAAATACGCCCGCTGCAAACTGGCGTGGCTGTCGGCGTCAACTTGGTCGAGCTTGACAAGCAAATCTTTCCATCGGAGA TGATTCGGCAGCTCGTCGTGATGACGACGTCCAATAACACGACATATTGGGTGGTAAATCAGATCGGATCGATCGAGAGC GGCCAGACTCTGCTGCGGCGTGTTGGTAGCCACGCACCCGAAATTTTATTGAGCAATACTACCGTATTTCCGATCGCGGT GAACGAAGAGATTCCTGAGGCCGTAGCCGATGAGTTGAACAAGGCGATATCGAGAGAGCCCGCACTGCCCAAACGGCAGT CGGACGGAGCGCCTCGAAAGGGAGACGACATCAATGCGAAGGTGTTCGCGAAGGCTCAGTCGTTCGTTGGGTTTGATACG AGTGGCGTCCCGGGCACCGGCGGAGGCAACTTGGCTTGCGCTTGGGCCGTCAACGAGGTGGTGCGCTTAGCGCTAGGCAA ACCCATAAGCACCGAGGGCCGAGGAAAAAACGGCTTGGGCACCGCGGGCCTGTTTGATGCGTTGAGACGGAATCACACTC AGGTGGATGCGCCGTCTCCTGGTTCCATCATAATCTCCCCCACGCCTCCAACGGGAAGTGTCCACGGGCATGTTGGAATT GTAGGCCAGAATCCTGGAGGGAATACCGACAACACTCAGATTTTTTCGAACAGCTCAAGGCAGGCGAAGTTTGCCCAAAA TCTTTCGATCAAGAGCTGGAAAGCGCGCTACGCTAACACGTTGCACCTTCAAGTTCTGTACTTCAACCTCAATCCAGACC AATTCTGA
Upstream 100 bases:
>100_bases CAGCTCCATTTGCAAATAAGCGATTACAATTCATTGAGGAAAACAAGATCCGCTGAATGGTTCGAGTCGATTGGAAGGAA CATATTCTACGGAGGTCAGA
Downstream 100 bases:
>100_bases TATCCACGCCTCGGCTTCGCCATTGGTCTAGAGTACAGTCATCAGACAATATTAAGCGAGGTTGGTGGCGCATAGGCCAT CAGCACCTTACCGGCTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MPAITDRLTDVSEENLLEMIKSFKEVDEADIVTAFRDSNGKFNVDSTVVVVDRPTDVSGTPLTIAGKISIFGGPDDTGVG DDEGLALLSAADVPNFPDIFLPDQPVGTTGLARRLNPNANYIACRWDYVATPKDYLRRHKVKVTASDTTIEAQPVDFGPD PSTGRSIDLSPALAKALKLKTDDLCTVQIRPLQTGVAVGVNLVELDKQIFPSEMIRQLVVMTTSNNTTYWVVNQIGSIES GQTLLRRVGSHAPEILLSNTTVFPIAVNEEIPEAVADELNKAISREPALPKRQSDGAPRKGDDINAKVFAKAQSFVGFDT SGVPGTGGGNLACAWAVNEVVRLALGKPISTEGRGKNGLGTAGLFDALRRNHTQVDAPSPGSIIISPTPPTGSVHGHVGI VGQNPGGNTDNTQIFSNSSRQAKFAQNLSIKSWKARYANTLHLQVLYFNLNPDQF
Sequences:
>Translated_455_residues MPAITDRLTDVSEENLLEMIKSFKEVDEADIVTAFRDSNGKFNVDSTVVVVDRPTDVSGTPLTIAGKISIFGGPDDTGVG DDEGLALLSAADVPNFPDIFLPDQPVGTTGLARRLNPNANYIACRWDYVATPKDYLRRHKVKVTASDTTIEAQPVDFGPD PSTGRSIDLSPALAKALKLKTDDLCTVQIRPLQTGVAVGVNLVELDKQIFPSEMIRQLVVMTTSNNTTYWVVNQIGSIES GQTLLRRVGSHAPEILLSNTTVFPIAVNEEIPEAVADELNKAISREPALPKRQSDGAPRKGDDINAKVFAKAQSFVGFDT SGVPGTGGGNLACAWAVNEVVRLALGKPISTEGRGKNGLGTAGLFDALRRNHTQVDAPSPGSIIISPTPPTGSVHGHVGI VGQNPGGNTDNTQIFSNSSRQAKFAQNLSIKSWKARYANTLHLQVLYFNLNPDQF >Mature_454_residues PAITDRLTDVSEENLLEMIKSFKEVDEADIVTAFRDSNGKFNVDSTVVVVDRPTDVSGTPLTIAGKISIFGGPDDTGVGD DEGLALLSAADVPNFPDIFLPDQPVGTTGLARRLNPNANYIACRWDYVATPKDYLRRHKVKVTASDTTIEAQPVDFGPDP STGRSIDLSPALAKALKLKTDDLCTVQIRPLQTGVAVGVNLVELDKQIFPSEMIRQLVVMTTSNNTTYWVVNQIGSIESG QTLLRRVGSHAPEILLSNTTVFPIAVNEEIPEAVADELNKAISREPALPKRQSDGAPRKGDDINAKVFAKAQSFVGFDTS GVPGTGGGNLACAWAVNEVVRLALGKPISTEGRGKNGLGTAGLFDALRRNHTQVDAPSPGSIIISPTPPTGSVHGHVGIV GQNPGGNTDNTQIFSNSSRQAKFAQNLSIKSWKARYANTLHLQVLYFNLNPDQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48735; Mature: 48604
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAITDRLTDVSEENLLEMIKSFKEVDEADIVTAFRDSNGKFNVDSTVVVVDRPTDVSGT CCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEEECCCCCCCC PLTIAGKISIFGGPDDTGVGDDEGLALLSAADVPNFPDIFLPDQPVGTTGLARRLNPNAN CEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCC YIACRWDYVATPKDYLRRHKVKVTASDTTIEAQPVDFGPDPSTGRSIDLSPALAKALKLK EEEEEECEECCCHHHHHHCEEEEEECCCEEEEECCCCCCCCCCCCEEECCHHHHHHHHCC TDDLCTVQIRPLQTGVAVGVNLVELDKQIFPSEMIRQLVVMTTSNNTTYWVVNQIGSIES CCCEEEEEEEEECCCHHHCCCHHHHHHHCCHHHHHHEEEEEEECCCEEEEEEECCCCCCC GQTLLRRVGSHAPEILLSNTTVFPIAVNEEIPEAVADELNKAISREPALPKRQSDGAPRK HHHHHHHHCCCCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GDDINAKVFAKAQSFVGFDTSGVPGTGGGNLACAWAVNEVVRLALGKPISTEGRGKNGLG CCCCCEEEEEEHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC TAGLFDALRRNHTQVDAPSPGSIIISPTPPTGSVHGHVGIVGQNPGGNTDNTQIFSNSSR HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCC QAKFAQNLSIKSWKARYANTLHLQVLYFNLNPDQF HHHHHHCCCCCHHHHHCCCEEEEEEEEEECCCCCC >Mature Secondary Structure PAITDRLTDVSEENLLEMIKSFKEVDEADIVTAFRDSNGKFNVDSTVVVVDRPTDVSGT CCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEEECCCCCCCC PLTIAGKISIFGGPDDTGVGDDEGLALLSAADVPNFPDIFLPDQPVGTTGLARRLNPNAN CEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCC YIACRWDYVATPKDYLRRHKVKVTASDTTIEAQPVDFGPDPSTGRSIDLSPALAKALKLK EEEEEECEECCCHHHHHHCEEEEEECCCEEEEECCCCCCCCCCCCEEECCHHHHHHHHCC TDDLCTVQIRPLQTGVAVGVNLVELDKQIFPSEMIRQLVVMTTSNNTTYWVVNQIGSIES CCCEEEEEEEEECCCHHHCCCHHHHHHHCCHHHHHHEEEEEEECCCEEEEEEECCCCCCC GQTLLRRVGSHAPEILLSNTTVFPIAVNEEIPEAVADELNKAISREPALPKRQSDGAPRK HHHHHHHHCCCCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GDDINAKVFAKAQSFVGFDTSGVPGTGGGNLACAWAVNEVVRLALGKPISTEGRGKNGLG CCCCCEEEEEEHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC TAGLFDALRRNHTQVDAPSPGSIIISPTPPTGSVHGHVGIVGQNPGGNTDNTQIFSNSSR HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCC QAKFAQNLSIKSWKARYANTLHLQVLYFNLNPDQF HHHHHHCCCCCHHHHHCCCEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA