Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343158
Identifier: 146343158
GI number: 146343158
Start: 6613361
End: 6614977
Strand: Direct
Name: 146343158
Synonym: BRADO6356
Alternate gene names: NA
Gene position: 6613361-6614977 (Clockwise)
Preceding gene: 146343154
Following gene: 146343162
Centisome position: 88.69
GC content: 62.52
Gene sequence:
>1617_bases GTGATTCGCCTGACCGAAATCAAGTTACCGCTGGATCATCCGGCTGAAGCAATCAAGAAGGCGGCCGCCGCTCGGTTGCG CATACCGGTGGAGCATCTGCTCTCGTGCGCGATATTCAGGCGCGCCCATGACGCACGTAAAAAGTCCGACATCGCGCTGG TCTATTCGCTCGATGTCAAGGTGAGGGACGAAGCGGCCGTGCTGAAGCGCTTCGCAAAGGACAAGGATGTTGTTCCCGCT CCAGATATGACTTACCGGTTTGTCGCTCGCGCGCCCGAGAACCTGCGCGTGCGGCCGCTCGTGATCGGTGCTGGGCCTTG TGGACTGTTCGCGGCGCTTGTGCTTGCCCAGATGGGCTTTCGGCCGCTCATTCTGGAGCGCGGCAAAGTGGTGCGGGAGC GCACCAGGGACACTTGGGCGCTATGGCGCCGCTCTGTGCTTGATCCAGAATCGAACGTGCAATATGGCGAGGGTGGCGCG GGAACGTTTTCCGATGGCAAGCTCTACAGCCAGGTCAAGGATCCGCGCCACCTCGGCCGCAAGGTGCTGACGGAGTTTGT CAAGGCGGACGCGCCATCTGAAATTCTCACCGAAGCTCACCCCCATATCGGCACGTTCCGCCTCGTGAAGATGGTGGAGA ACATGCGGGCCACGATCGAAGGGCTTGGTGGGGAATACCGTTTCAAGAGCCGCGTTGCGGATTTCGATATCGAGACGTCC AGCAACGGTGAGCGGCGCATCCGTGGCGTAGTACTGTCTGACGGTGAGCGCATCGCAGCAAGCCATGTCGTGCTCGCGAT CGGCCACTCGTCGCGTGATACTTTCCAGGTTCTAGCGGATCGCGGGGTCCACGTGGAGGCGAAGCCGTTCTCAATCGGCT TCCGGATCGAGCATCCGCAATCTGTTATCGATACGGCGCGGTTCGGCGCTCGCGCGGGGCATCCTGTTCTGGGCGCTGCG GATTACAAGCTTGTCCATCATGCCTCCAATGATCGCGCCGTCTACAGTTTCTGTATGTGTCCGGGCGGCACAGTGGTCGC AGCAACGTCCGAGCCTGGACGCGTGGTCACCAATGGCATGAGCCAGTATTCACGCGCCGAGCGCAACGCCAACGCGGGTA TCGTGGTCGGGATTACCCCGCGCGATTTTCCGGGCGGGCCGCTGGCGGGGGTCGATTTCCAACGGCGCTGGGAGTCGGCG GCGTTTGTTGCGGGGGGCGGCACTTACGCGGCGCCGGGGCAGCGTGTCGGCGATTTCCTTGCCGGCGTACCGTCAACGTC GCTCGGCAGCGTTATCCCGTCCTACAAGCCAGGCGTCACACCGGCTGACCTTTCTGCGTGCTTGCCCGACTATGCGATCG CGGCGATCCGCGAAGCGCTGGTTGTGTTCGGCCGCAAGATCCGCGGTTTCGATATGGGGGATGCGGTTCTTACCGGCGTG GAGACACGCACGTCCTCCCCCATTCGCATCACGCGCGACGACACGTTCCAGAGCCTTAACACCAAAGGGCTGTTTCCCGC CGGCGAGGGCGCTGGCTATGCCGGCGGAATTCTCTCCGCCGGCATCGACGGCATCAAGATCGCGGAAGCGGTGGCGAAGA GCATCGTCGTCGACTGA
Upstream 100 bases:
>100_bases CCAGGGCGGACATGTCGCCTTGCGGATGCTGATGGCGTCATACGCCGTGCTTTTGTTGTGCTACAAGACGGCAATTCTAA CCTATTCGTAGCGAGTGCAA
Downstream 100 bases:
>100_bases CTCCAGGAGAGCCGGTCCGACGACTGGCTGGGTGGCAAGCGGAGATCAGGTGCGCCTACTCTCAGCGGCATATTTGATGC GTCCGCACGCTCGACTCTAC
Product: putative FAD-dependent dehydrogenase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVKVRDEAAVLKRFAKDKDVVPA PDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGFRPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGA GTFSDGKLYSQVKDPRHLGRKVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQSVIDTARFGARAGHPVLGAA DYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESA AFVAGGGTYAAPGQRVGDFLAGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD
Sequences:
>Translated_538_residues MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVKVRDEAAVLKRFAKDKDVVPA PDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGFRPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGA GTFSDGKLYSQVKDPRHLGRKVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQSVIDTARFGARAGHPVLGAA DYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESA AFVAGGGTYAAPGQRVGDFLAGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD >Mature_538_residues MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVKVRDEAAVLKRFAKDKDVVPA PDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGFRPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGA GTFSDGKLYSQVKDPRHLGRKVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQSVIDTARFGARAGHPVLGAA DYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESA AFVAGGGTYAAPGQRVGDFLAGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 57901; Mature: 57901
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVK CEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECEE VRDEAAVLKRFAKDKDVVPAPDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGF ECHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCC RPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGAGTFSDGKLYSQVKDPRHLGR CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHH KVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS HHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCEEECC SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQ CCCCEEEEEEEECCCCEEEECEEEEEECCCCCHHHHHHHCCCCEEEECCEEEEEEECCCH SVIDTARFGARAGHPVLGAADYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGM HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHH SQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESAAFVAGGGTYAAPGQRVGDFL HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHH AGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV HCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHCCC ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD CCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVK CEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECEE VRDEAAVLKRFAKDKDVVPAPDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGF ECHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCC RPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGAGTFSDGKLYSQVKDPRHLGR CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHH KVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS HHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCEEECC SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQ CCCCEEEEEEEECCCCEEEECEEEEEECCCCCHHHHHHHCCCCEEEECCEEEEEEECCCH SVIDTARFGARAGHPVLGAADYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGM HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHH SQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESAAFVAGGGTYAAPGQRVGDFL HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHH AGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV HCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHCCC ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD CCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]