Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146343158

Identifier: 146343158

GI number: 146343158

Start: 6613361

End: 6614977

Strand: Direct

Name: 146343158

Synonym: BRADO6356

Alternate gene names: NA

Gene position: 6613361-6614977 (Clockwise)

Preceding gene: 146343154

Following gene: 146343162

Centisome position: 88.69

GC content: 62.52

Gene sequence:

>1617_bases
GTGATTCGCCTGACCGAAATCAAGTTACCGCTGGATCATCCGGCTGAAGCAATCAAGAAGGCGGCCGCCGCTCGGTTGCG
CATACCGGTGGAGCATCTGCTCTCGTGCGCGATATTCAGGCGCGCCCATGACGCACGTAAAAAGTCCGACATCGCGCTGG
TCTATTCGCTCGATGTCAAGGTGAGGGACGAAGCGGCCGTGCTGAAGCGCTTCGCAAAGGACAAGGATGTTGTTCCCGCT
CCAGATATGACTTACCGGTTTGTCGCTCGCGCGCCCGAGAACCTGCGCGTGCGGCCGCTCGTGATCGGTGCTGGGCCTTG
TGGACTGTTCGCGGCGCTTGTGCTTGCCCAGATGGGCTTTCGGCCGCTCATTCTGGAGCGCGGCAAAGTGGTGCGGGAGC
GCACCAGGGACACTTGGGCGCTATGGCGCCGCTCTGTGCTTGATCCAGAATCGAACGTGCAATATGGCGAGGGTGGCGCG
GGAACGTTTTCCGATGGCAAGCTCTACAGCCAGGTCAAGGATCCGCGCCACCTCGGCCGCAAGGTGCTGACGGAGTTTGT
CAAGGCGGACGCGCCATCTGAAATTCTCACCGAAGCTCACCCCCATATCGGCACGTTCCGCCTCGTGAAGATGGTGGAGA
ACATGCGGGCCACGATCGAAGGGCTTGGTGGGGAATACCGTTTCAAGAGCCGCGTTGCGGATTTCGATATCGAGACGTCC
AGCAACGGTGAGCGGCGCATCCGTGGCGTAGTACTGTCTGACGGTGAGCGCATCGCAGCAAGCCATGTCGTGCTCGCGAT
CGGCCACTCGTCGCGTGATACTTTCCAGGTTCTAGCGGATCGCGGGGTCCACGTGGAGGCGAAGCCGTTCTCAATCGGCT
TCCGGATCGAGCATCCGCAATCTGTTATCGATACGGCGCGGTTCGGCGCTCGCGCGGGGCATCCTGTTCTGGGCGCTGCG
GATTACAAGCTTGTCCATCATGCCTCCAATGATCGCGCCGTCTACAGTTTCTGTATGTGTCCGGGCGGCACAGTGGTCGC
AGCAACGTCCGAGCCTGGACGCGTGGTCACCAATGGCATGAGCCAGTATTCACGCGCCGAGCGCAACGCCAACGCGGGTA
TCGTGGTCGGGATTACCCCGCGCGATTTTCCGGGCGGGCCGCTGGCGGGGGTCGATTTCCAACGGCGCTGGGAGTCGGCG
GCGTTTGTTGCGGGGGGCGGCACTTACGCGGCGCCGGGGCAGCGTGTCGGCGATTTCCTTGCCGGCGTACCGTCAACGTC
GCTCGGCAGCGTTATCCCGTCCTACAAGCCAGGCGTCACACCGGCTGACCTTTCTGCGTGCTTGCCCGACTATGCGATCG
CGGCGATCCGCGAAGCGCTGGTTGTGTTCGGCCGCAAGATCCGCGGTTTCGATATGGGGGATGCGGTTCTTACCGGCGTG
GAGACACGCACGTCCTCCCCCATTCGCATCACGCGCGACGACACGTTCCAGAGCCTTAACACCAAAGGGCTGTTTCCCGC
CGGCGAGGGCGCTGGCTATGCCGGCGGAATTCTCTCCGCCGGCATCGACGGCATCAAGATCGCGGAAGCGGTGGCGAAGA
GCATCGTCGTCGACTGA

Upstream 100 bases:

>100_bases
CCAGGGCGGACATGTCGCCTTGCGGATGCTGATGGCGTCATACGCCGTGCTTTTGTTGTGCTACAAGACGGCAATTCTAA
CCTATTCGTAGCGAGTGCAA

Downstream 100 bases:

>100_bases
CTCCAGGAGAGCCGGTCCGACGACTGGCTGGGTGGCAAGCGGAGATCAGGTGCGCCTACTCTCAGCGGCATATTTGATGC
GTCCGCACGCTCGACTCTAC

Product: putative FAD-dependent dehydrogenase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVKVRDEAAVLKRFAKDKDVVPA
PDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGFRPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGA
GTFSDGKLYSQVKDPRHLGRKVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS
SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQSVIDTARFGARAGHPVLGAA
DYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESA
AFVAGGGTYAAPGQRVGDFLAGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV
ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD

Sequences:

>Translated_538_residues
MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVKVRDEAAVLKRFAKDKDVVPA
PDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGFRPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGA
GTFSDGKLYSQVKDPRHLGRKVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS
SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQSVIDTARFGARAGHPVLGAA
DYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESA
AFVAGGGTYAAPGQRVGDFLAGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV
ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD
>Mature_538_residues
MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVKVRDEAAVLKRFAKDKDVVPA
PDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGFRPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGA
GTFSDGKLYSQVKDPRHLGRKVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS
SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQSVIDTARFGARAGHPVLGAA
DYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESA
AFVAGGGTYAAPGQRVGDFLAGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV
ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 57901; Mature: 57901

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVK
CEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECEE
VRDEAAVLKRFAKDKDVVPAPDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGF
ECHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
RPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGAGTFSDGKLYSQVKDPRHLGR
CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHH
KVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS
HHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCEEECC
SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQ
CCCCEEEEEEEECCCCEEEECEEEEEECCCCCHHHHHHHCCCCEEEECCEEEEEEECCCH
SVIDTARFGARAGHPVLGAADYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGM
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHH
SQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESAAFVAGGGTYAAPGQRVGDFL
HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHH
AGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV
HCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHCCC
ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD
CCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRLTEIKLPLDHPAEAIKKAAAARLRIPVEHLLSCAIFRRAHDARKKSDIALVYSLDVK
CEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECEE
VRDEAAVLKRFAKDKDVVPAPDMTYRFVARAPENLRVRPLVIGAGPCGLFAALVLAQMGF
ECHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
RPLILERGKVVRERTRDTWALWRRSVLDPESNVQYGEGGAGTFSDGKLYSQVKDPRHLGR
CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHH
KVLTEFVKADAPSEILTEAHPHIGTFRLVKMVENMRATIEGLGGEYRFKSRVADFDIETS
HHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCEEECC
SNGERRIRGVVLSDGERIAASHVVLAIGHSSRDTFQVLADRGVHVEAKPFSIGFRIEHPQ
CCCCEEEEEEEECCCCEEEECEEEEEECCCCCHHHHHHHCCCCEEEECCEEEEEEECCCH
SVIDTARFGARAGHPVLGAADYKLVHHASNDRAVYSFCMCPGGTVVAATSEPGRVVTNGM
HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHH
SQYSRAERNANAGIVVGITPRDFPGGPLAGVDFQRRWESAAFVAGGGTYAAPGQRVGDFL
HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHH
AGVPSTSLGSVIPSYKPGVTPADLSACLPDYAIAAIREALVVFGRKIRGFDMGDAVLTGV
HCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHCCC
ETRTSSPIRITRDDTFQSLNTKGLFPAGEGAGYAGGILSAGIDGIKIAEAVAKSIVVD
CCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]