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The map label for this gene is yaeJ [C]

Identifier: 146342892

GI number: 146342892

Start: 6300113

End: 6300532

Strand: Direct

Name: yaeJ [C]

Synonym: BRADO6073

Alternate gene names: 146342892

Gene position: 6300113-6300532 (Clockwise)

Preceding gene: 146342891

Following gene: 146342893

Centisome position: 84.49

GC content: 67.14

Gene sequence:

>420_bases
ATGCTGCGGATCTCCCGCGACCTTGCCATCGACGAGAACGACATCGAGATCTCGTTCGTCCGCGCCTCCGGGCCCGGCGG
CCAGAACGTCAACAAGCTGTCGACCTCGGCGCAGCTGCGCTTCGACACCAGCCGCATCACGCTGCCGGAGGATGCCGCCG
CACGGCTGGCGCGCCTTGCCGGCCAGCGCATGACCAAGACCGGCGTCATCGTCATCCAGGCCGAACGCTTCCGCACCCAG
GAGCGCAACAAGGCCGATGCGATCGAGCGGCTCGTCACGCTGCTGCGCGAAGCCATGGTGCGGCCGAAGGTGCGGCGTCC
GACCAAGCCGACATTCGGCTCCAAGCAGCGCCGCCTCGAAGGCAAGAAAATTCGCAGCGACGTGAAAGCGGGACGCGGCG
CGCGTCGTTTCGACGATTAG

Upstream 100 bases:

>100_bases
TTGGTGACGGTCCGGGGCCGACCGCGGGAGCCTATCCCCCCGCGCACCCCGCCGCTAAACCCGCTATGGTGCACGCCACA
TCCGACTCACCTGGTGCCCC

Downstream 100 bases:

>100_bases
TTCGTCGGCCGCGCACCTCGCCCCATCCCGTCATTCCGCGCAATCGTCAACGCGCCAGCGTTAGCGATTGAACCCAGACT
CTCGATATAGTTGGAAATAA

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLRISRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRITLPEDAAARLARLAGQRMTKTGVIVIQAERFRTQ
ERNKADAIERLVTLLREAMVRPKVRRPTKPTFGSKQRRLEGKKIRSDVKAGRGARRFDD

Sequences:

>Translated_139_residues
MLRISRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRITLPEDAAARLARLAGQRMTKTGVIVIQAERFRTQ
ERNKADAIERLVTLLREAMVRPKVRRPTKPTFGSKQRRLEGKKIRSDVKAGRGARRFDD
>Mature_139_residues
MLRISRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRITLPEDAAARLARLAGQRMTKTGVIVIQAERFRTQ
ERNKADAIERLVTLLREAMVRPKVRRPTKPTFGSKQRRLEGKKIRSDVKAGRGARRFDD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Homo sapiens, GI4557657, Length=135, Percent_Identity=31.8518518518519, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786389, Length=133, Percent_Identity=46.6165413533835, Blast_Score=120, Evalue=4e-29,
Organism=Drosophila melanogaster, GI19921098, Length=128, Percent_Identity=35.15625, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15688; Mature: 15688

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRISRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRITLPEDAAARLARLA
CCCCCCCCEECCCCCEEEEEEECCCCCCCCCHHCCCEEEEECCCEEECCHHHHHHHHHHH
GQRMTKTGVIVIQAERFRTQERNKADAIERLVTLLREAMVRPKVRRPTKPTFGSKQRRLE
HCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
GKKIRSDVKAGRGARRFDD
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLRISRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRITLPEDAAARLARLA
CCCCCCCCEECCCCCEEEEEEECCCCCCCCCHHCCCEEEEECCCEEECCHHHHHHHHHHH
GQRMTKTGVIVIQAERFRTQERNKADAIERLVTLLREAMVRPKVRRPTKPTFGSKQRRLE
HCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
GKKIRSDVKAGRGARRFDD
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]