| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is lgt [H]
Identifier: 146342825
GI number: 146342825
Start: 6232002
End: 6232859
Strand: Reverse
Name: lgt [H]
Synonym: BRADO6004
Alternate gene names: 146342825
Gene position: 6232859-6232002 (Counterclockwise)
Preceding gene: 146342830
Following gene: 146342824
Centisome position: 83.59
GC content: 64.8
Gene sequence:
>858_bases ATGACGCCTCTCCTCATCGACTTTCCCGTGTTCGACCCGGTCGCGATCGCGATCGGTCCGTTCGCGATCCGCTGGTACGC ATTGGCCTATATCTGCGGCATCGTGATCGGCTGGCTCTACGCCCGCTCGCTGCTGAAGAAGGACCGACTGTGGGGCGGCC CGGCGCCGATCTCGCTGCTCCAGCTCGACGACTTCATCCTGTGGGCCACGATCGGCATCATCCTGGGCGGCCGCACCGGC TATGTGCTGTTCTATAATCTGCCGTTCTTTATCAAGAACCCGCTCGAGATCTTTCAGCTGTGGAACGGCGGCATGTCGTT CCATGGCGGCTTCATGGGCTGCGTGGTCGCGGTGATCTGGTTCGCCCGCCGCAACGGCCTGCCGATCCTGTCGCTCGGCG ACATCACCACCGCGGTGGCCCCGATCGGCCTGCTGCTCGGCCGCATCGCCAATTTCATCAATGGCGAATTGTGGGGCCGC GCCGCCGATGCGAGCGTGCCCTGGGCGATGATCTTCCCGCACGATCCGACCCATCTGCCGCGTCATCCGAGCCAGCTCTA TGAAGCGGGTCTCGAAGGCGTCGTGCTGTTCATCGCGCTGGCCATCATGATCCGCTTCGGCGCGCTGAAGCGGCCGGGCC TGATCCTCGGCGGCTTCATCGGCCTCTACGGCATCGCGCGTATCGTCAGCGAGCTGTTCCGCGAACCCGACGTGCAACTC GGCTTTCTCTGGCGCGGCCTCACCATGGGCATGGTGCTCTCGGTGCCGATGCTGATCGTCGGTGCAATCCTGGTGATCAG GGCGTTGCGCCAGCCCGAGGTCCATCACGCCACTCCCTCGCTGCAGGCCCAGCCGTGA
Upstream 100 bases:
>100_bases CCCGAAGGATCTCGCGACGCCGCTGCGGCGGGGTCCGTTCAAAGCCCGCATCGCCTGCGTGCTTGCCGAAACGGAAAGCC GTGCCCACGAAAGCCTGTGA
Downstream 100 bases:
>100_bases TCGAAACTTCTCCGCTCCAACCCGAGATCAAGCGGCTGATCAAGGCGTCCGGACCGATGCCGGTGTGGCGCTACATGGAG CTGTGCCTGATGCATCCGGA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTPLLIDFPVFDPVAIAIGPFAIRWYALAYICGIVIGWLYARSLLKKDRLWGGPAPISLLQLDDFILWATIGIILGGRTG YVLFYNLPFFIKNPLEIFQLWNGGMSFHGGFMGCVVAVIWFARRNGLPILSLGDITTAVAPIGLLLGRIANFINGELWGR AADASVPWAMIFPHDPTHLPRHPSQLYEAGLEGVVLFIALAIMIRFGALKRPGLILGGFIGLYGIARIVSELFREPDVQL GFLWRGLTMGMVLSVPMLIVGAILVIRALRQPEVHHATPSLQAQP
Sequences:
>Translated_285_residues MTPLLIDFPVFDPVAIAIGPFAIRWYALAYICGIVIGWLYARSLLKKDRLWGGPAPISLLQLDDFILWATIGIILGGRTG YVLFYNLPFFIKNPLEIFQLWNGGMSFHGGFMGCVVAVIWFARRNGLPILSLGDITTAVAPIGLLLGRIANFINGELWGR AADASVPWAMIFPHDPTHLPRHPSQLYEAGLEGVVLFIALAIMIRFGALKRPGLILGGFIGLYGIARIVSELFREPDVQL GFLWRGLTMGMVLSVPMLIVGAILVIRALRQPEVHHATPSLQAQP >Mature_284_residues TPLLIDFPVFDPVAIAIGPFAIRWYALAYICGIVIGWLYARSLLKKDRLWGGPAPISLLQLDDFILWATIGIILGGRTGY VLFYNLPFFIKNPLEIFQLWNGGMSFHGGFMGCVVAVIWFARRNGLPILSLGDITTAVAPIGLLLGRIANFINGELWGRA ADASVPWAMIFPHDPTHLPRHPSQLYEAGLEGVVLFIALAIMIRFGALKRPGLILGGFIGLYGIARIVSELFREPDVQLG FLWRGLTMGMVLSVPMLIVGAILVIRALRQPEVHHATPSLQAQP
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=301, Percent_Identity=41.5282392026578, Blast_Score=214, Evalue=4e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 31335; Mature: 31204
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLLIDFPVFDPVAIAIGPFAIRWYALAYICGIVIGWLYARSLLKKDRLWGGPAPISLL CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHH QLDDFILWATIGIILGGRTGYVLFYNLPFFIKNPLEIFQLWNGGMSFHGGFMGCVVAVIW HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHH FARRNGLPILSLGDITTAVAPIGLLLGRIANFINGELWGRAADASVPWAMIFPHDPTHLP HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEECCCCCCCCC RHPSQLYEAGLEGVVLFIALAIMIRFGALKRPGLILGGFIGLYGIARIVSELFREPDVQL CCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE GFLWRGLTMGMVLSVPMLIVGAILVIRALRQPEVHHATPSLQAQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TPLLIDFPVFDPVAIAIGPFAIRWYALAYICGIVIGWLYARSLLKKDRLWGGPAPISLL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHH QLDDFILWATIGIILGGRTGYVLFYNLPFFIKNPLEIFQLWNGGMSFHGGFMGCVVAVIW HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHH FARRNGLPILSLGDITTAVAPIGLLLGRIANFINGELWGRAADASVPWAMIFPHDPTHLP HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEECCCCCCCCC RHPSQLYEAGLEGVVLFIALAIMIRFGALKRPGLILGGFIGLYGIARIVSELFREPDVQL CCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE GFLWRGLTMGMVLSVPMLIVGAILVIRALRQPEVHHATPSLQAQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]