Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yqaB [C]

Identifier: 146342807

GI number: 146342807

Start: 6215519

End: 6216187

Strand: Direct

Name: yqaB [C]

Synonym: BRADO5984

Alternate gene names: 146342807

Gene position: 6215519-6216187 (Clockwise)

Preceding gene: 146342806

Following gene: 146342808

Centisome position: 83.36

GC content: 66.67

Gene sequence:

>669_bases
GTGGAGGCTGTCCTGCTCGACATGGACGGCACCCTGCTCGATACCGAGAAGGTCTATCTCGAAGCGTCGATCGCGGCGAT
GAAGGCACTCGGCTACACCGAGGGCATCACCGAGCTCTGTCACGCGATGATCGGCATTCCCGGGCCCGACAATGAGCGGA
CCCTGCGCGATCATTTCGGCGACAATTTCCCCCTTGTCGAGGTCAACAGGCTGTTCGCCGCCAAGACCGCCGAGATCCTC
CATGCCGGCATGCCGCTGAAGCGCGGAGTCGTCGACCTGCTCGATGCGATTGACGCAGCCGGTCTGCCGAAAGCTGTCGT
CACCTCGTCGTCGCGCCACACGGCCGCAGAGCATCTGCGCCTGGCTGGCATCGATCATCGCTTCGACGCGGTGCTGACGC
GCGACGATGTCAGCCGCGCCAAGCCGCATCCGGATCTCTATCTGCTAGCCGCGGAGCGGCTGCGGACGCGGGCGCCGGCC
TGCGTCGCGATCGAGGATTCCAATCCCGGCGTCGCCGCGGCCCACGCCGCCGGCGCGATCACGCTGATGGTGCCGGACAT
CGTGCCGCCGACCGATCAGTCGCGCGAGAAATGCGTCGCCGTGCTGCCCGACCTCGACGCCACGATCACGCTGCTCGCCG
AACGTTCGGTGCTTCCGGTCAGGACCTGA

Upstream 100 bases:

>100_bases
TGCCGAAGGCCGGGCAGAGCGGGTTCAACGACTGCCTGTGCGCCAGATGCCTCGCAAAACTCGCCCGCCCATCGGAGGCG
ACCTCGTGACCCGCTGGCAT

Downstream 100 bases:

>100_bases
AGCGGCGGCGCCTTCATTCGCCATTGTCTTCAAAAGCTGCCGAAGCCGGTCACGATCTCTTCACGCCAATGCACGCATCC
GGGGGCGCTGATGGATGCAT

Product: putative haloacid dehalogenase/epoxide hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFGDNFPLVEVNRLFAAKTAEIL
HAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLRLAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPA
CVAIEDSNPGVAAAHAAGAITLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT

Sequences:

>Translated_222_residues
MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFGDNFPLVEVNRLFAAKTAEIL
HAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLRLAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPA
CVAIEDSNPGVAAAHAAGAITLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT
>Mature_222_residues
MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFGDNFPLVEVNRLFAAKTAEIL
HAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLRLAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPA
CVAIEDSNPGVAAAHAAGAITLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT

Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789046, Length=180, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788021, Length=198, Percent_Identity=26.2626262626263, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789787, Length=223, Percent_Identity=30.9417040358744, Blast_Score=62, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17137324, Length=188, Percent_Identity=31.3829787234043, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI116008157, Length=197, Percent_Identity=31.9796954314721, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 23781; Mature: 23781

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFG
CCEEEEECCCCEECCHHHEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHCC
DNFPLVEVNRLFAAKTAEILHAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLR
CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHH
LAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPACVAIEDSNPGVAAAHAAGAI
HCCCCCHHHEEEECCHHHHCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCEEEHHHCCEE
TLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT
EEEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFG
CCEEEEECCCCEECCHHHEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHCC
DNFPLVEVNRLFAAKTAEILHAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLR
CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHH
LAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPACVAIEDSNPGVAAAHAAGAI
HCCCCCHHHEEEECCHHHHCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCEEEHHHCCEE
TLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT
EEEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]