Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is yqaB [C]
Identifier: 146342807
GI number: 146342807
Start: 6215519
End: 6216187
Strand: Direct
Name: yqaB [C]
Synonym: BRADO5984
Alternate gene names: 146342807
Gene position: 6215519-6216187 (Clockwise)
Preceding gene: 146342806
Following gene: 146342808
Centisome position: 83.36
GC content: 66.67
Gene sequence:
>669_bases GTGGAGGCTGTCCTGCTCGACATGGACGGCACCCTGCTCGATACCGAGAAGGTCTATCTCGAAGCGTCGATCGCGGCGAT GAAGGCACTCGGCTACACCGAGGGCATCACCGAGCTCTGTCACGCGATGATCGGCATTCCCGGGCCCGACAATGAGCGGA CCCTGCGCGATCATTTCGGCGACAATTTCCCCCTTGTCGAGGTCAACAGGCTGTTCGCCGCCAAGACCGCCGAGATCCTC CATGCCGGCATGCCGCTGAAGCGCGGAGTCGTCGACCTGCTCGATGCGATTGACGCAGCCGGTCTGCCGAAAGCTGTCGT CACCTCGTCGTCGCGCCACACGGCCGCAGAGCATCTGCGCCTGGCTGGCATCGATCATCGCTTCGACGCGGTGCTGACGC GCGACGATGTCAGCCGCGCCAAGCCGCATCCGGATCTCTATCTGCTAGCCGCGGAGCGGCTGCGGACGCGGGCGCCGGCC TGCGTCGCGATCGAGGATTCCAATCCCGGCGTCGCCGCGGCCCACGCCGCCGGCGCGATCACGCTGATGGTGCCGGACAT CGTGCCGCCGACCGATCAGTCGCGCGAGAAATGCGTCGCCGTGCTGCCCGACCTCGACGCCACGATCACGCTGCTCGCCG AACGTTCGGTGCTTCCGGTCAGGACCTGA
Upstream 100 bases:
>100_bases TGCCGAAGGCCGGGCAGAGCGGGTTCAACGACTGCCTGTGCGCCAGATGCCTCGCAAAACTCGCCCGCCCATCGGAGGCG ACCTCGTGACCCGCTGGCAT
Downstream 100 bases:
>100_bases AGCGGCGGCGCCTTCATTCGCCATTGTCTTCAAAAGCTGCCGAAGCCGGTCACGATCTCTTCACGCCAATGCACGCATCC GGGGGCGCTGATGGATGCAT
Product: putative haloacid dehalogenase/epoxide hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFGDNFPLVEVNRLFAAKTAEIL HAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLRLAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPA CVAIEDSNPGVAAAHAAGAITLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT
Sequences:
>Translated_222_residues MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFGDNFPLVEVNRLFAAKTAEIL HAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLRLAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPA CVAIEDSNPGVAAAHAAGAITLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT >Mature_222_residues MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFGDNFPLVEVNRLFAAKTAEIL HAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLRLAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPA CVAIEDSNPGVAAAHAAGAITLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789046, Length=180, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788021, Length=198, Percent_Identity=26.2626262626263, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789787, Length=223, Percent_Identity=30.9417040358744, Blast_Score=62, Evalue=3e-11, Organism=Drosophila melanogaster, GI17137324, Length=188, Percent_Identity=31.3829787234043, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI116008157, Length=197, Percent_Identity=31.9796954314721, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23781; Mature: 23781
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFG CCEEEEECCCCEECCHHHEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHCC DNFPLVEVNRLFAAKTAEILHAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLR CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHH LAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPACVAIEDSNPGVAAAHAAGAI HCCCCCHHHEEEECCHHHHCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCEEEHHHCCEE TLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT EEEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MEAVLLDMDGTLLDTEKVYLEASIAAMKALGYTEGITELCHAMIGIPGPDNERTLRDHFG CCEEEEECCCCEECCHHHEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHCC DNFPLVEVNRLFAAKTAEILHAGMPLKRGVVDLLDAIDAAGLPKAVVTSSSRHTAAEHLR CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHH LAGIDHRFDAVLTRDDVSRAKPHPDLYLLAAERLRTRAPACVAIEDSNPGVAAAHAAGAI HCCCCCHHHEEEECCHHHHCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCEEEHHHCCEE TLMVPDIVPPTDQSREKCVAVLPDLDATITLLAERSVLPVRT EEEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]