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The map label for this gene is 146342792

Identifier: 146342792

GI number: 146342792

Start: 6199080

End: 6200810

Strand: Reverse

Name: 146342792

Synonym: BRADO5969

Alternate gene names: NA

Gene position: 6200810-6199080 (Counterclockwise)

Preceding gene: 146342793

Following gene: 146342791

Centisome position: 83.16

GC content: 66.72

Gene sequence:

>1731_bases
ATGTGTCGGTGGTGGCGCAACGCCGTCTTCTACGTTGGTGCTGCGATCGTCATGATGACCGCGGCGACCTCGGATGTGCA
CGCCCAGGCCGTCGCCCCAAGCCAGGTGACACCGCCCAGCCTGCGTCCGCCGCAGCCTCCCGCGGGCGCCGTGATCGTCA
CGCCGCGTTCGTCCGCTCCGAACGCGCCGGCCGGCGCGCGTGAGCTGACGGTGCTGGTCGGCGCGGTGCGCATCGAGGAC
GGATTCGCGGAGCTCGCGAGCGCCGCCGAGACACTCGTGGCCGCGCTTGCGGGCAAGCGTGTCAGCGTCGAGGCCATTTA
TGCGGCGGCCGCAGAACTCGAACAGGCCTATGTCCGGGCGGGATTTCCGCTGGTCCGCGTGGTGGTGCCGCCGCAGCGAC
TGGTCGACCATGGTCCGCTGCGACTGGTCGTGATCGACGGCTTCGTCGAACGGGTCGACGTGTCGGCCTTGCCGGCGCAA
GTGCGTGAGGTGGTCCGCAGACGGACCGCCACGCTGGTCGGCCGTCGTCATGTCACGCAGGAGCAGATCGAGAACGCATT
GCTGATCGCGGGCGAGGTGCCCGGTGTGCGATTGAGGAGTACGCTGGCTCGCGGCGTCGCGGAGGGAGGCGTCGGCCTGA
TCCTGGACGGCGAGCATCATGTCGTGGCGATCTCCACCGGCGGCGACAACCGCCTGTCCAAATCGCTCGGGTTCTGGCAG
GCGCGGAACGCGGTCACGGTGAACAGCGCGCTCGGCTGGGGCGAGCAGTTCTATGCCTCGGTCGGCTCCGGCACGAACCC
CAATGATTTCGTTGCGGGCCGTCCTCCGCTGCTGCTCTACGGCGCGGGCGTGGTGGTTCCTCTCGGTAACAATGGCCTCA
CCTTCAATCCGGAATATACGAGGTCGATCACGCGAACTGCGGCCACGGCGAATGTCCCGGCGACATACGGCACGTTCGAA
CGTTATTCAGTGCGATTCCGCGATCCGCTTCAGCTCACGCGCAGCAGCTCGCTATATGCGAACGCTGCGCTCGAACTGAT
CGACCAAAAGTCGGACGCCCCGGAGTTCGGTGTCACGCTGAATCACGATCATTACAGTGCGTTGCGCCTCGGTCCTGATT
ACGCGACGACGCTGCCATGGGGCGCCGGACTGCAACTCGGCGCACAAGGCTCGTTCGGACTTGCGGGCCGCGGGCCGCTC
GACGTCGACGCGTCCGGCGTTCCGTTGTCGCGACAGGGCGCGAGCTCGCAATTCGTCAAATGGTCGGCCAACGCGCGGCT
GACGCAGCCGCTGGCAGGCGGGCTGCAACTCGACGTGCTGATGGCTGGCCAGTACTCGCAGAACCGGCCGCTGTTGCGGC
CGGAGCAGATCGCTCTGGATGGCACCGATGCGTTGACCGCCTTCTCGACGGGAACGTTCACGGCCGACCAAGGCGTCACT
GTGCGGGGCGAGCTGTCACGCTCGTTCGCGCTTCCAGCCGGCGCGATGAATATGAGTCTGTCTCCGTATCTGTTCGGTGC
GTATGGCCGGGGCTGGATCGTCAACGCAACCGCTGCGGAGCAACCCGTCTTCAACGCGGAGTCCGTGGGCCTCGGCATTC
GCAGCGGTGTCGGAGCGGTGACCGGCTGGACAGCCGCGAACCTCTCATTGGAGGTCGCCCGCGGCTTTACCGATCTCGGT
GGCGTCAGGGCAGGATGGCGGGGGACGGTATTGCTGAACGTGTCGTTCTGA

Upstream 100 bases:

>100_bases
ATTAAACACCCATTAACCATGGAACTCGAAGGTCCCGAGATGTTGCCGGCATTGCAGCGACGCGATGCCCCTGTTCCAGT
TTCCCTTGGGCCCTTAACGG

Downstream 100 bases:

>100_bases
TTTCCGCGCGCTCCCCGCCCGCCCCTCTCACATGGTGACCCCTTCGTTAACGCGAAGGCTGCCGAAATGGCGAAACATTT
CATCAAATGTCAGTTCGAAC

Product: putative hemolysin activator-like protein with signal peptide

Products: NA

Alternate protein names: Hemolysin Activation/Secretion Protein; Polypeptide-Transport-Associated Domain Protein ShlB-Type; Hemolysin Activator-Like Protein With Signal Peptide

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MCRWWRNAVFYVGAAIVMMTAATSDVHAQAVAPSQVTPPSLRPPQPPAGAVIVTPRSSAPNAPAGARELTVLVGAVRIED
GFAELASAAETLVAALAGKRVSVEAIYAAAAELEQAYVRAGFPLVRVVVPPQRLVDHGPLRLVVIDGFVERVDVSALPAQ
VREVVRRRTATLVGRRHVTQEQIENALLIAGEVPGVRLRSTLARGVAEGGVGLILDGEHHVVAISTGGDNRLSKSLGFWQ
ARNAVTVNSALGWGEQFYASVGSGTNPNDFVAGRPPLLLYGAGVVVPLGNNGLTFNPEYTRSITRTAATANVPATYGTFE
RYSVRFRDPLQLTRSSSLYANAALELIDQKSDAPEFGVTLNHDHYSALRLGPDYATTLPWGAGLQLGAQGSFGLAGRGPL
DVDASGVPLSRQGASSQFVKWSANARLTQPLAGGLQLDVLMAGQYSQNRPLLRPEQIALDGTDALTAFSTGTFTADQGVT
VRGELSRSFALPAGAMNMSLSPYLFGAYGRGWIVNATAAEQPVFNAESVGLGIRSGVGAVTGWTAANLSLEVARGFTDLG
GVRAGWRGTVLLNVSF

Sequences:

>Translated_576_residues
MCRWWRNAVFYVGAAIVMMTAATSDVHAQAVAPSQVTPPSLRPPQPPAGAVIVTPRSSAPNAPAGARELTVLVGAVRIED
GFAELASAAETLVAALAGKRVSVEAIYAAAAELEQAYVRAGFPLVRVVVPPQRLVDHGPLRLVVIDGFVERVDVSALPAQ
VREVVRRRTATLVGRRHVTQEQIENALLIAGEVPGVRLRSTLARGVAEGGVGLILDGEHHVVAISTGGDNRLSKSLGFWQ
ARNAVTVNSALGWGEQFYASVGSGTNPNDFVAGRPPLLLYGAGVVVPLGNNGLTFNPEYTRSITRTAATANVPATYGTFE
RYSVRFRDPLQLTRSSSLYANAALELIDQKSDAPEFGVTLNHDHYSALRLGPDYATTLPWGAGLQLGAQGSFGLAGRGPL
DVDASGVPLSRQGASSQFVKWSANARLTQPLAGGLQLDVLMAGQYSQNRPLLRPEQIALDGTDALTAFSTGTFTADQGVT
VRGELSRSFALPAGAMNMSLSPYLFGAYGRGWIVNATAAEQPVFNAESVGLGIRSGVGAVTGWTAANLSLEVARGFTDLG
GVRAGWRGTVLLNVSF
>Mature_576_residues
MCRWWRNAVFYVGAAIVMMTAATSDVHAQAVAPSQVTPPSLRPPQPPAGAVIVTPRSSAPNAPAGARELTVLVGAVRIED
GFAELASAAETLVAALAGKRVSVEAIYAAAAELEQAYVRAGFPLVRVVVPPQRLVDHGPLRLVVIDGFVERVDVSALPAQ
VREVVRRRTATLVGRRHVTQEQIENALLIAGEVPGVRLRSTLARGVAEGGVGLILDGEHHVVAISTGGDNRLSKSLGFWQ
ARNAVTVNSALGWGEQFYASVGSGTNPNDFVAGRPPLLLYGAGVVVPLGNNGLTFNPEYTRSITRTAATANVPATYGTFE
RYSVRFRDPLQLTRSSSLYANAALELIDQKSDAPEFGVTLNHDHYSALRLGPDYATTLPWGAGLQLGAQGSFGLAGRGPL
DVDASGVPLSRQGASSQFVKWSANARLTQPLAGGLQLDVLMAGQYSQNRPLLRPEQIALDGTDALTAFSTGTFTADQGVT
VRGELSRSFALPAGAMNMSLSPYLFGAYGRGWIVNATAAEQPVFNAESVGLGIRSGVGAVTGWTAANLSLEVARGFTDLG
GVRAGWRGTVLLNVSF

Specific function: Unknown

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60569; Mature: 60569

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRWWRNAVFYVGAAIVMMTAATSDVHAQAVAPSQVTPPSLRPPQPPAGAVIVTPRSSAP
CCCHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCC
NAPAGARELTVLVGAVRIEDGFAELASAAETLVAALAGKRVSVEAIYAAAAELEQAYVRA
CCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHC
GFPLVRVVVPPQRLVDHGPLRLVVIDGFVERVDVSALPAQVREVVRRRTATLVGRRHVTQ
CCCEEEEEECHHHHHCCCCEEEEEEECCHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCH
EQIENALLIAGEVPGVRLRSTLARGVAEGGVGLILDGEHHVVAISTGGDNRLSKSLGFWQ
HHHCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHHCCCEE
ARNAVTVNSALGWGEQFYASVGSGTNPNDFVAGRPPLLLYGAGVVVPLGNNGLTFNPEYT
CCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECEEEEEECCCCEEECCHHH
RSITRTAATANVPATYGTFERYSVRFRDPLQLTRSSSLYANAALELIDQKSDAPEFGVTL
HHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEE
NHDHYSALRLGPDYATTLPWGAGLQLGAQGSFGLAGRGPLDVDASGVPLSRQGASSQFVK
CCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
WSANARLTQPLAGGLQLDVLMAGQYSQNRPLLRPEQIALDGTDALTAFSTGTFTADQGVT
EECCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCEECCCCEE
VRGELSRSFALPAGAMNMSLSPYLFGAYGRGWIVNATAAEQPVFNAESVGLGIRSGVGAV
EEECCCCEECCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCHHCCCCHHCCCCCE
TGWTAANLSLEVARGFTDLGGVRAGWRGTVLLNVSF
ECCEEECEEEEECCCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MCRWWRNAVFYVGAAIVMMTAATSDVHAQAVAPSQVTPPSLRPPQPPAGAVIVTPRSSAP
CCCHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCC
NAPAGARELTVLVGAVRIEDGFAELASAAETLVAALAGKRVSVEAIYAAAAELEQAYVRA
CCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHC
GFPLVRVVVPPQRLVDHGPLRLVVIDGFVERVDVSALPAQVREVVRRRTATLVGRRHVTQ
CCCEEEEEECHHHHHCCCCEEEEEEECCHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCH
EQIENALLIAGEVPGVRLRSTLARGVAEGGVGLILDGEHHVVAISTGGDNRLSKSLGFWQ
HHHCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHHCCCEE
ARNAVTVNSALGWGEQFYASVGSGTNPNDFVAGRPPLLLYGAGVVVPLGNNGLTFNPEYT
CCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECEEEEEECCCCEEECCHHH
RSITRTAATANVPATYGTFERYSVRFRDPLQLTRSSSLYANAALELIDQKSDAPEFGVTL
HHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEE
NHDHYSALRLGPDYATTLPWGAGLQLGAQGSFGLAGRGPLDVDASGVPLSRQGASSQFVK
CCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
WSANARLTQPLAGGLQLDVLMAGQYSQNRPLLRPEQIALDGTDALTAFSTGTFTADQGVT
EECCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCEECCCCEE
VRGELSRSFALPAGAMNMSLSPYLFGAYGRGWIVNATAAEQPVFNAESVGLGIRSGVGAV
EEECCCCEECCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCHHCCCCHHCCCCCE
TGWTAANLSLEVARGFTDLGGVRAGWRGTVLLNVSF
ECCEEECEEEEECCCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA