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The map label for this gene is serC [H]

Identifier: 146342774

GI number: 146342774

Start: 6172494

End: 6173666

Strand: Reverse

Name: serC [H]

Synonym: BRADO5949

Alternate gene names: 146342774

Gene position: 6173666-6172494 (Counterclockwise)

Preceding gene: 146342775

Following gene: 146342773

Centisome position: 82.79

GC content: 66.92

Gene sequence:

>1173_bases
ATGACTGCAGCGAAGCCCTCGCAGCGGCCCGCCGTGCCGCATTTCTCCTCCGGCCCCTGCGCCAAGCGCCCCGGATGGAC
CGCCGAAAATCTCAAGGACGCTCCCCTCGGCCGCTCGCATCGCGCGAAGGTCGGCAAAGCCAAGCTGAAGCAGGCCATCG
AGCTGACGCGCGACGTGCTCGAAGTGCCGGCCGACTACAAGATCGGCATCGTGCCGGCGTCCGACACCGGCGCCGTCGAG
ATGGCGTTGTGGTCGCTGCTCGGCGCGCGGCCCGTCACGACCATCGCCTGGGAATCCTTCGGCGAAGGCTGGGTGAGCGA
CATCGTCAAGGAGCTCAAGCTCAAGGACGTCACCAAGCTGCACGCCGGCTATGGCGAGATCCCGGACCTGTCAAAGGTCG
ATCAGGCGAGCGACGTCGTCTTCACCTGGAACGGCACCACCTCGGGCGTGCGCGTTCCGAATGCCGACTGGATCAGCGCG
AGACGCGAAGGCCTGACGATCTGCGACGCAACGTCGGCCGCATTCGCGCAGCCGTTGGACTGGCCGAAGCTCGATGTCGT
CACCTTCTCCTGGCAGAAGGCGCTCGGCGGCGAGGCCGCGCATGGCATGCTCATTCTGTCGCCGCGCGCGGTGGAGCGTC
TCGAGACCTACAAGCCGGCCTGGCCGCTGCCGAAGATCTTCCGCCTTACCAAGGGCGGCAAGCTCAATGCCGGCATCTTC
GAGGGCGAGACCATCAACACGCCGTCGATGCTGTGCGTCGAGGACTATCTGGATGCGCTGAACTGGGGCAAGTCGATCGG
CGGCCTCAAGGCGCTGATCGCGCGCGCCGACGCCAACACCAAGGTGCTAGCCGACTGGAAGGCGCGCACGCCGTGGATCG
ATTTCCTCGCCAAGGATCCGGCGATCCGCTCCAACACCTCGGTGTGCCTGAAGGTCGTCGATCCCGCGATCACATCGCTG
ACGGCCGATGCCCAGGCCGAATTCGCCAAGAAGCTGGTGGCGCTGGTCGAGAAGGAGAACGCCGGCTTCGACTTCGCGCA
TTACCGCGACGCGCCGGCCGGCCTGCGCATCTGGTGCGGCGCCACGGTGGAAGCGAGCGACGTCGCGCTGCTGACGCAGT
GGATCGACTGGGCGTTCGCGGAAGCCAAGGCCGCGCTGCCGAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
CCATCGCGCGAAGTTCCTTGACGCGGAACGGGCGTTCGCCTAATCACGCCGGCGGGACACCTCCCCCCAACGGGAGGCTT
ACTATCTGGAAGGATAGACG

Downstream 100 bases:

>100_bases
GCCTCATCGAAGCTTCGTAGGGTGGGCAAAGGCGCGCAGCGTCGTGCCCACCGACTATTTCACCTGACGCGAGAGGGCGG
TGGGCACGCTTCGCTTTGCC

Product: phosphoserine aminotransferase

Products: NA

Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTAAKPSQRPAVPHFSSGPCAKRPGWTAENLKDAPLGRSHRAKVGKAKLKQAIELTRDVLEVPADYKIGIVPASDTGAVE
MALWSLLGARPVTTIAWESFGEGWVSDIVKELKLKDVTKLHAGYGEIPDLSKVDQASDVVFTWNGTTSGVRVPNADWISA
RREGLTICDATSAAFAQPLDWPKLDVVTFSWQKALGGEAAHGMLILSPRAVERLETYKPAWPLPKIFRLTKGGKLNAGIF
EGETINTPSMLCVEDYLDALNWGKSIGGLKALIARADANTKVLADWKARTPWIDFLAKDPAIRSNTSVCLKVVDPAITSL
TADAQAEFAKKLVALVEKENAGFDFAHYRDAPAGLRIWCGATVEASDVALLTQWIDWAFAEAKAALPKAA

Sequences:

>Translated_390_residues
MTAAKPSQRPAVPHFSSGPCAKRPGWTAENLKDAPLGRSHRAKVGKAKLKQAIELTRDVLEVPADYKIGIVPASDTGAVE
MALWSLLGARPVTTIAWESFGEGWVSDIVKELKLKDVTKLHAGYGEIPDLSKVDQASDVVFTWNGTTSGVRVPNADWISA
RREGLTICDATSAAFAQPLDWPKLDVVTFSWQKALGGEAAHGMLILSPRAVERLETYKPAWPLPKIFRLTKGGKLNAGIF
EGETINTPSMLCVEDYLDALNWGKSIGGLKALIARADANTKVLADWKARTPWIDFLAKDPAIRSNTSVCLKVVDPAITSL
TADAQAEFAKKLVALVEKENAGFDFAHYRDAPAGLRIWCGATVEASDVALLTQWIDWAFAEAKAALPKAA
>Mature_389_residues
TAAKPSQRPAVPHFSSGPCAKRPGWTAENLKDAPLGRSHRAKVGKAKLKQAIELTRDVLEVPADYKIGIVPASDTGAVEM
ALWSLLGARPVTTIAWESFGEGWVSDIVKELKLKDVTKLHAGYGEIPDLSKVDQASDVVFTWNGTTSGVRVPNADWISAR
REGLTICDATSAAFAQPLDWPKLDVVTFSWQKALGGEAAHGMLILSPRAVERLETYKPAWPLPKIFRLTKGGKLNAGIFE
GETINTPSMLCVEDYLDALNWGKSIGGLKALIARADANTKVLADWKARTPWIDFLAKDPAIRSNTSVCLKVVDPAITSLT
ADAQAEFAKKLVALVEKENAGFDFAHYRDAPAGLRIWCGATVEASDVALLTQWIDWAFAEAKAALPKAA

Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]

COG id: COG1932

COG function: function code HE; Phosphoserine aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR022278
- InterPro:   IPR006271
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.6.1.52 [H]

Molecular weight: Translated: 42169; Mature: 42037

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAKPSQRPAVPHFSSGPCAKRPGWTAENLKDAPLGRSHRAKVGKAKLKQAIELTRDVL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EVPADYKIGIVPASDTGAVEMALWSLLGARPVTTIAWESFGEGWVSDIVKELKLKDVTKL
HCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HAGYGEIPDLSKVDQASDVVFTWNGTTSGVRVPNADWISARREGLTICDATSAAFAQPLD
HCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCHHHHHCCCC
WPKLDVVTFSWQKALGGEAAHGMLILSPRAVERLETYKPAWPLPKIFRLTKGGKLNAGIF
CCCEEEEEEEHHHHCCCCCCCCEEEECHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEE
EGETINTPSMLCVEDYLDALNWGKSIGGLKALIARADANTKVLADWKARTPWIDFLAKDP
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCC
AIRSNTSVCLKVVDPAITSLTADAQAEFAKKLVALVEKENAGFDFAHYRDAPAGLRIWCG
CCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEC
ATVEASDVALLTQWIDWAFAEAKAALPKAA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAAKPSQRPAVPHFSSGPCAKRPGWTAENLKDAPLGRSHRAKVGKAKLKQAIELTRDVL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EVPADYKIGIVPASDTGAVEMALWSLLGARPVTTIAWESFGEGWVSDIVKELKLKDVTKL
HCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HAGYGEIPDLSKVDQASDVVFTWNGTTSGVRVPNADWISARREGLTICDATSAAFAQPLD
HCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCHHHHHCCCC
WPKLDVVTFSWQKALGGEAAHGMLILSPRAVERLETYKPAWPLPKIFRLTKGGKLNAGIF
CCCEEEEEEEHHHHCCCCCCCCEEEECHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEE
EGETINTPSMLCVEDYLDALNWGKSIGGLKALIARADANTKVLADWKARTPWIDFLAKDP
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCC
AIRSNTSVCLKVVDPAITSLTADAQAEFAKKLVALVEKENAGFDFAHYRDAPAGLRIWCG
CCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEC
ATVEASDVALLTQWIDWAFAEAKAALPKAA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]