| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342749
Identifier: 146342749
GI number: 146342749
Start: 6140490
End: 6141836
Strand: Direct
Name: 146342749
Synonym: BRADO5921
Alternate gene names: NA
Gene position: 6140490-6141836 (Clockwise)
Preceding gene: 146342748
Following gene: 146342750
Centisome position: 82.35
GC content: 64.44
Gene sequence:
>1347_bases ATGATGGCTAAGGACGAGCTTTTCGATGGATTGCCGGAGCAGTCGGGTCCCAAAGCGCGGGAGCTTCCGAAGGGTGCGCC TCGTCTGCGGGTTCCGGAGCGCAACCAGGTCGAGCTGCGCGCGGTCGATATCGACAGCCTGATCGGGCAGGATCATCCGG CGCGGATGATCTGGACCTATGTCGAGACGCTCGACCTGAGCGAGTTGGAAGACCGAGTGAAGGCGCGGGAGAACAGGCCT GGTCATCCGGCACCGTCGCCACGCCTTTTGCTGGCGCTCTGGCTCTATGCCACCAGCGACGGCGTCGGCAGTGCTCGGGC GCTGGATCGCCTGTGCGAGAGCCATGATGCCTATCGCTGGCTGTGTGGCGGGGTATCGCTGAACTATCACACGCTGTCGG ACTTCCGCGTCGGCTGTGCCGATGTGCTCGACCGCCTGATGAGCGAACATCTGGCGGCGTTGAGCGAGGCCGGGCTGGTC GATCTCGATACGCTGGCACAGGACGGGGTGCGGATCCGCGCCAATGCGGGGGCCAGCTCGTTCCGGCGCGAAGCGAGGCT GCAGCAGAAGCTGGCGGAAGCAACGGAGGTGGTGGAAGAGCTCAAGCGGGAAGTCGATGCAGATCCAGAAGCCAGCAACC GGCGCATCCGCGCGGCGCGTGAGCGCGCCGCACGCGAGCATAAACAGAAGGTCGAAGCGGCGCAGGCGGCGCTGGAGGAG ATCAAGCGCAAGCGCCAGAAGCTCGAGGAAAAAGGCGGCAACGGCAAGAAGCCGAAGGAGCCTCGGGCCTCCACCACCGA TCCGCAGGCGCGGCGGATGAAGATGGCCGATGCCGGCTTCCGTCCCGCCTACAACGTGCAGGTCGTCAGTGCTGCTGCCG CGATGATCGTGGTCGCAATCGACATCGACAACAACGGATCAGACGGCGGCCTGATGCGACCGATGCTGGAGCGGCTGCGC GACAAGCTGCAACGCCTGCCCAGGCGCTACCTCGTCGATGGCGGATACTGCCGTGGCGACGACATCGAATGGGCGCATGG CCAGAACATCGAGATCTACTGTCCGCCGCGCTCGCAAAAAAGCGGTGTTGATCCTTATCGGCCCCGAGATACCGATGGCC CTGGTGTGGCGGCCTGGCGAGCGCGCATGGCGAGCGAAGCCGGCAAGGCTCAGTATCAGCTCCGCTCGCTGTGCGAATGC ATCCACGCCCGCTGGCGCAACTGGGACCTCCGGCAAGTGACGGTACGCGGCATCGACAAGGTTCGCGCCGTCGTGAGCTG GTACGCGTTCACCAACAACCTTCTGCAAGGATTGCACCTCATCGCCTGTCAAAAAGCAGCATCATAG
Upstream 100 bases:
>100_bases GCCTGCGGCGGCCGCTTTGCCCACCCTACGAGGCTGTGAATCTTTCGATGCCTGTTCTCGCTGACTATGATTCTCTAAGC GGAGCGGTTTGCTGGAGGTC
Downstream 100 bases:
>100_bases CCGCCGATAGCGGCATCCGAGGGATCCTCCGGGACAATCCGCCGCACAGAGCCGCACACAACGGCTATCCCCGCGGCGAC AGCCCCCTCGTCGCAAACTC
Product: putative transposase
Products: NA
Alternate protein names: Transposase; ISPsy6 Transposase; ISPpu20 Transposase; IS4 Family Transposase
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARMIWTYVETLDLSELEDRVKARENRP GHPAPSPRLLLALWLYATSDGVGSARALDRLCESHDAYRWLCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSEAGLV DLDTLAQDGVRIRANAGASSFRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQAALEE IKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMIVVAIDIDNNGSDGGLMRPMLERLR DKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPPRSQKSGVDPYRPRDTDGPGVAAWRARMASEAGKAQYQLRSLCEC IHARWRNWDLRQVTVRGIDKVRAVVSWYAFTNNLLQGLHLIACQKAAS
Sequences:
>Translated_448_residues MMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARMIWTYVETLDLSELEDRVKARENRP GHPAPSPRLLLALWLYATSDGVGSARALDRLCESHDAYRWLCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSEAGLV DLDTLAQDGVRIRANAGASSFRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQAALEE IKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMIVVAIDIDNNGSDGGLMRPMLERLR DKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPPRSQKSGVDPYRPRDTDGPGVAAWRARMASEAGKAQYQLRSLCEC IHARWRNWDLRQVTVRGIDKVRAVVSWYAFTNNLLQGLHLIACQKAAS >Mature_448_residues MMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARMIWTYVETLDLSELEDRVKARENRP GHPAPSPRLLLALWLYATSDGVGSARALDRLCESHDAYRWLCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSEAGLV DLDTLAQDGVRIRANAGASSFRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQAALEE IKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMIVVAIDIDNNGSDGGLMRPMLERLR DKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPPRSQKSGVDPYRPRDTDGPGVAAWRARMASEAGKAQYQLRSLCEC IHARWRNWDLRQVTVRGIDKVRAVVSWYAFTNNLLQGLHLIACQKAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50196; Mature: 50196
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARMIWTY CCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHH VETLDLSELEDRVKARENRPGHPAPSPRLLLALWLYATSDGVGSARALDRLCESHDAYRW HHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEE LCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSEAGLVDLDTLAQDGVRIRANAGASS HHCCCEECEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCHHH FRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQAALEE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMIVVAI HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEE DIDNNGSDGGLMRPMLERLRDKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPPRSQK EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCC SGVDPYRPRDTDGPGVAAWRARMASEAGKAQYQLRSLCECIHARWRNWDLRQVTVRGIDK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VRAVVSWYAFTNNLLQGLHLIACQKAAS HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMAKDELFDGLPEQSGPKARELPKGAPRLRVPERNQVELRAVDIDSLIGQDHPARMIWTY CCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHH VETLDLSELEDRVKARENRPGHPAPSPRLLLALWLYATSDGVGSARALDRLCESHDAYRW HHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEE LCGGVSLNYHTLSDFRVGCADVLDRLMSEHLAALSEAGLVDLDTLAQDGVRIRANAGASS HHCCCEECEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCHHH FRREARLQQKLAEATEVVEELKREVDADPEASNRRIRAARERAAREHKQKVEAAQAALEE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IKRKRQKLEEKGGNGKKPKEPRASTTDPQARRMKMADAGFRPAYNVQVVSAAAAMIVVAI HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEE DIDNNGSDGGLMRPMLERLRDKLQRLPRRYLVDGGYCRGDDIEWAHGQNIEIYCPPRSQK EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCC SGVDPYRPRDTDGPGVAAWRARMASEAGKAQYQLRSLCECIHARWRNWDLRQVTVRGIDK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VRAVVSWYAFTNNLLQGLHLIACQKAAS HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA