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The map label for this gene is 146342676

Identifier: 146342676

GI number: 146342676

Start: 6060057

End: 6060554

Strand: Reverse

Name: 146342676

Synonym: BRADO5843

Alternate gene names: NA

Gene position: 6060554-6060057 (Counterclockwise)

Preceding gene: 146342677

Following gene: 146342671

Centisome position: 81.28

GC content: 57.83

Gene sequence:

>498_bases
ATGATCTTTGACGATGTCTTACAGGCGCTGGAGCATAAGCGGTCGCCGGTCATCTTGACCGAGCGCAGGGACCACGCGTT
GCTCCTGGCCGAGAGGCTGTCTCGTTTCGCGCGCAATGTCATTGTCTTGACCGGTGGGGTAGGAGCAAAGCAAAGAAGAG
GCGCAACGCAAAGGCTCGGCGATATTCCTGCGACCGACGAGCGGGTGCTGATCGCCACCGGGCGATACATCGGCGAGGGC
TTCGATGATGCTCGGCTCGATACGCTCTTTCTTGCGATGCCGATCTCATGGAAGGGAACGCTCGCACAATATGTCGGGCG
TCTGCATCGATCATACGATGCCAAGCGCGAGGTTATCGTCTACGACTACGTCGATGAAGCCGTGCCAGTCCTCAAACGCA
TGAGCGAGAAGCGGGGCAGGGGTTACAAGAGCGTCGGCTATTCGATCGATTGCGGCCCGGCATCGTCATGCCATCCAACG
ATGTTGCCGATTTTGTAA

Upstream 100 bases:

>100_bases
GCGCAGAACATTCTTCGTGCTTCCACCTGAGCTCCAGTACGATCGTCCGCCGATTCAGCAGGTCTACGCGGCGCTTGCCG
CTGACGAGGCTCGCAACGCT

Downstream 100 bases:

>100_bases
GCGTCGCTGCCTTATCGGGAAAGGCCAAGAGTCGCGAAATGTCGGCCCTTCGACCTTCGCCAGCCTATCCTTTTCGCCCC
TGTACTCTCCGATTGCGCGA

Product: helicase

Products: NA

Alternate protein names: Helicase; Type III Restriction Res Subunit; Type III Restriction Res Subunit Family; Superfamily II DNA/RNA Helicase; ATP-Dependet DEAD/DEAH Box Helicase; ATP-Dependent Helicase; Nucleic Acid ATP-Dependent Helicase; DEAD/DEAH Box Helicase; ATP-Dependent RNA Helicase; Type III Restriction- System Subunit Res; Type III Restriction; DNA Or RNA Helicases Of Superfamily II; DEAD/DEAH Box Family Helicase; DNA Helicase

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MIFDDVLQALEHKRSPVILTERRDHALLLAERLSRFARNVIVLTGGVGAKQRRGATQRLGDIPATDERVLIATGRYIGEG
FDDARLDTLFLAMPISWKGTLAQYVGRLHRSYDAKREVIVYDYVDEAVPVLKRMSEKRGRGYKSVGYSIDCGPASSCHPT
MLPIL

Sequences:

>Translated_165_residues
MIFDDVLQALEHKRSPVILTERRDHALLLAERLSRFARNVIVLTGGVGAKQRRGATQRLGDIPATDERVLIATGRYIGEG
FDDARLDTLFLAMPISWKGTLAQYVGRLHRSYDAKREVIVYDYVDEAVPVLKRMSEKRGRGYKSVGYSIDCGPASSCHPT
MLPIL
>Mature_165_residues
MIFDDVLQALEHKRSPVILTERRDHALLLAERLSRFARNVIVLTGGVGAKQRRGATQRLGDIPATDERVLIATGRYIGEG
FDDARLDTLFLAMPISWKGTLAQYVGRLHRSYDAKREVIVYDYVDEAVPVLKRMSEKRGRGYKSVGYSIDCGPASSCHPT
MLPIL

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18488; Mature: 18488

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDDVLQALEHKRSPVILTERRDHALLLAERLSRFARNVIVLTGGVGAKQRRGATQRLG
CCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHCCHHHHHC
DIPATDERVLIATGRYIGEGFDDARLDTLFLAMPISWKGTLAQYVGRLHRSYDAKREVIV
CCCCCCCEEEEEECCHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEE
YDYVDEAVPVLKRMSEKRGRGYKSVGYSIDCGPASSCHPTMLPIL
EHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFDDVLQALEHKRSPVILTERRDHALLLAERLSRFARNVIVLTGGVGAKQRRGATQRLG
CCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHCCHHHHHC
DIPATDERVLIATGRYIGEGFDDARLDTLFLAMPISWKGTLAQYVGRLHRSYDAKREVIV
CCCCCCCEEEEEECCHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEE
YDYVDEAVPVLKRMSEKRGRGYKSVGYSIDCGPASSCHPTMLPIL
EHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA