| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is oxlT [H]
Identifier: 146342669
GI number: 146342669
Start: 6052440
End: 6054095
Strand: Reverse
Name: oxlT [H]
Synonym: BRADO5836
Alternate gene names: 146342669
Gene position: 6054095-6052440 (Counterclockwise)
Preceding gene: 146342670
Following gene: 146342665
Centisome position: 81.19
GC content: 65.58
Gene sequence:
>1656_bases ATGGCAACCATTGAGAGCGCGGGCTCGCTCCCGAACGCGCAAGCGGGCATCTTCGACCGTGAGCACACGGTCGCAAAGGC GGGGTTCAACCGCTGGCTGGTTCCACCGGCGGCCCTGTGCATTCATCTGTGCATTGGCATGGCCTATGGCTTCTCGGTGT TCTGGCTACCGCTGTCGCGCGCGATCGGCGTGACGCAGAGCACCGTCTGCACCGACATGACCCTGCTGCAGGAACTGTTC ACGACCAGCTGCGACTGGAAGGTCGCGAGCCTCGGCTGGATGTACACGCTGTTCTTCGTGCTGCTCGGCGGCTCTGCGGC GGTCTGGGGCGGCTGGCTGGAGCGGGCGGGCCCGCGCAAGGCCGGCGCGGTGGCGGCGTGCTGCTGGGGCGGCGGTCTGC TGATCGCAGCGCTCGGCATCTATGTCCACCAGCTCTGGATGATGTGGCTCGGCGCCGGCGTGATCGGCGGCATCGGCCTC GGTCTCGGCTACATCTCGCCGGTCTCGACCCTGGTAAAATGGTTCCCGGACCGTCGCGGCATGGCGACCGGCATGGCCAT CATGGGGTTCGGCGGCGGCGCGATGATCGGTGCTCCGCTGGCCAACCTGCTGATGAACTACTTCAAGACCCCGACCTCGG TCGGCGTCTGGGAGACCTTCGTCACGATGGGCGTGATCTATTTCGTGTTCATGATGATCGGCGCCTTCGCCTATCGCGTC GCTCCGGTGGGCTGGCAGCCCGAGGGCTGGACGCCGCCGGCGGTGAAGAAGGCGATGATCTCCGAGCATCACGTGCATCT CGATAACGCGCACAAGACCCCGCAGTTCTGGCTGGTCTGGTGGGTGCTGTGCTTGAACGTGTCGGCGGGCATCGGCGTCA TCGGCATGGCTTCGCCGATGCTGCAGGAGATCTTCGCCGGCAAGCTGATCGGTCTGCCCGACGTCAGCTTCAACCAGCTC GACGCCACGCAGAAGGCCACCGTCGCCGGCATCGCAGCCGGCTTTGCCGGCCTGCTGTCGCTGTTCAACATCGGCGGCCG CTTCTTCTGGGCCTCGCTGTCCGACCACATCGGCCGCAAGGCGACCTATTACTGCTTCTTCCTGATCGGCATCGTGCTCT ACGCGCTGGCGCCGACCTTCGCGGCGATGGGCTCGAAGCTGCTCTTCGTGGGCGCCTTTGCCATCATCCTCTCGATGTAT GGCGGCGGCTTCGCGACGGTGCCGGCCTATCTCGCTGACCTGTTCGGCACTCAGTTCGTGGGCGCCATCCACGGCCGGCT GCTGACGGCCTGGGCCACCGCCGGCATCATCGGTCCGGTGGTCGTCAACTACATCCGCGAGTTTCAGCTTGCCGCCGGCG TGCCGCGCGACCAGCTGTACAACACCACGATGTACATCCTCTGCGCCATGCTGCTCGCCGGCCTGATCTGCAACTTCATG ATCAAGCCCGTCGATCACAAGTGGAACATGAGCCCCGAAGAAGTGGCGCGCTACCAGGCTGAGCTCGCCAAGAGCGAGTC GGCGATCCAGCACGGCTCGTTCGGCATCGGCAAGGGCGGCCTCGACCTGAGCTCGGCGCTGTTCTGGGCCTTCGTCGGCG TGCCGCTGGCCTGGGGCGTCTGGAAGACGCTCGAAAGCGCGGTAAAGATCTTCTGA
Upstream 100 bases:
>100_bases TAGGTCGACGGTCGGCAGGGTGAGTGAGCGTATTGATTCTGATCAAGGGGACAGAACATGACGTCGTTGCGTTTGACGGG AGTCCGTAGGGGAGGAATGC
Downstream 100 bases:
>100_bases TCCACCGATCGCGAAGCTTGCATGCGGGGCGGCCTGATCGGCCGCCCCGTTTTTTTGCCCATGCCAGAATAAGCGATTAG CTTCGCCGTCCCGGCGCAGC
Product: major facilitator superfamily oxalate/formate antiporter permease
Products: NA
Alternate protein names: OFA; Oxalate:formate antiport protein; Oxalate:formate exchange protein [H]
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MATIESAGSLPNAQAGIFDREHTVAKAGFNRWLVPPAALCIHLCIGMAYGFSVFWLPLSRAIGVTQSTVCTDMTLLQELF TTSCDWKVASLGWMYTLFFVLLGGSAAVWGGWLERAGPRKAGAVAACCWGGGLLIAALGIYVHQLWMMWLGAGVIGGIGL GLGYISPVSTLVKWFPDRRGMATGMAIMGFGGGAMIGAPLANLLMNYFKTPTSVGVWETFVTMGVIYFVFMMIGAFAYRV APVGWQPEGWTPPAVKKAMISEHHVHLDNAHKTPQFWLVWWVLCLNVSAGIGVIGMASPMLQEIFAGKLIGLPDVSFNQL DATQKATVAGIAAGFAGLLSLFNIGGRFFWASLSDHIGRKATYYCFFLIGIVLYALAPTFAAMGSKLLFVGAFAIILSMY GGGFATVPAYLADLFGTQFVGAIHGRLLTAWATAGIIGPVVVNYIREFQLAAGVPRDQLYNTTMYILCAMLLAGLICNFM IKPVDHKWNMSPEEVARYQAELAKSESAIQHGSFGIGKGGLDLSSALFWAFVGVPLAWGVWKTLESAVKIF
Sequences:
>Translated_551_residues MATIESAGSLPNAQAGIFDREHTVAKAGFNRWLVPPAALCIHLCIGMAYGFSVFWLPLSRAIGVTQSTVCTDMTLLQELF TTSCDWKVASLGWMYTLFFVLLGGSAAVWGGWLERAGPRKAGAVAACCWGGGLLIAALGIYVHQLWMMWLGAGVIGGIGL GLGYISPVSTLVKWFPDRRGMATGMAIMGFGGGAMIGAPLANLLMNYFKTPTSVGVWETFVTMGVIYFVFMMIGAFAYRV APVGWQPEGWTPPAVKKAMISEHHVHLDNAHKTPQFWLVWWVLCLNVSAGIGVIGMASPMLQEIFAGKLIGLPDVSFNQL DATQKATVAGIAAGFAGLLSLFNIGGRFFWASLSDHIGRKATYYCFFLIGIVLYALAPTFAAMGSKLLFVGAFAIILSMY GGGFATVPAYLADLFGTQFVGAIHGRLLTAWATAGIIGPVVVNYIREFQLAAGVPRDQLYNTTMYILCAMLLAGLICNFM IKPVDHKWNMSPEEVARYQAELAKSESAIQHGSFGIGKGGLDLSSALFWAFVGVPLAWGVWKTLESAVKIF >Mature_550_residues ATIESAGSLPNAQAGIFDREHTVAKAGFNRWLVPPAALCIHLCIGMAYGFSVFWLPLSRAIGVTQSTVCTDMTLLQELFT TSCDWKVASLGWMYTLFFVLLGGSAAVWGGWLERAGPRKAGAVAACCWGGGLLIAALGIYVHQLWMMWLGAGVIGGIGLG LGYISPVSTLVKWFPDRRGMATGMAIMGFGGGAMIGAPLANLLMNYFKTPTSVGVWETFVTMGVIYFVFMMIGAFAYRVA PVGWQPEGWTPPAVKKAMISEHHVHLDNAHKTPQFWLVWWVLCLNVSAGIGVIGMASPMLQEIFAGKLIGLPDVSFNQLD ATQKATVAGIAAGFAGLLSLFNIGGRFFWASLSDHIGRKATYYCFFLIGIVLYALAPTFAAMGSKLLFVGAFAIILSMYG GGFATVPAYLADLFGTQFVGAIHGRLLTAWATAGIIGPVVVNYIREFQLAAGVPRDQLYNTTMYILCAMLLAGLICNFMI KPVDHKWNMSPEEVARYQAELAKSESAIQHGSFGIGKGGLDLSSALFWAFVGVPLAWGVWKTLESAVKIF
Specific function: Anion transporter that carries out the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation, at the plasma membrane, and in doing so catalyzes the vectorial portion of a proton-motive metabolic cycle that drives ATP
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. OFA (TC 2.A.1.11) family [H]
Homologues:
Organism=Escherichia coli, GI1789969, Length=370, Percent_Identity=25.4054054054054, Blast_Score=98, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 59266; Mature: 59134
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIESAGSLPNAQAGIFDREHTVAKAGFNRWLVPPAALCIHLCIGMAYGFSVFWLPLSR CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AIGVTQSTVCTDMTLLQELFTTSCDWKVASLGWMYTLFFVLLGGSAAVWGGWLERAGPRK HHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC AGAVAACCWGGGLLIAALGIYVHQLWMMWLGAGVIGGIGLGLGYISPVSTLVKWFPDRRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MATGMAIMGFGGGAMIGAPLANLLMNYFKTPTSVGVWETFVTMGVIYFVFMMIGAFAYRV CHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APVGWQPEGWTPPAVKKAMISEHHVHLDNAHKTPQFWLVWWVLCLNVSAGIGVIGMASPM CCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCHHH LQEIFAGKLIGLPDVSFNQLDATQKATVAGIAAGFAGLLSLFNIGGRFFWASLSDHIGRK HHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHCCCH ATYYCFFLIGIVLYALAPTFAAMGSKLLFVGAFAIILSMYGGGFATVPAYLADLFGTQFV HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GAIHGRLLTAWATAGIIGPVVVNYIREFQLAAGVPRDQLYNTTMYILCAMLLAGLICNFM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IKPVDHKWNMSPEEVARYQAELAKSESAIQHGSFGIGKGGLDLSSALFWAFVGVPLAWGV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WKTLESAVKIF HHHHHHHHHCC >Mature Secondary Structure ATIESAGSLPNAQAGIFDREHTVAKAGFNRWLVPPAALCIHLCIGMAYGFSVFWLPLSR CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AIGVTQSTVCTDMTLLQELFTTSCDWKVASLGWMYTLFFVLLGGSAAVWGGWLERAGPRK HHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC AGAVAACCWGGGLLIAALGIYVHQLWMMWLGAGVIGGIGLGLGYISPVSTLVKWFPDRRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MATGMAIMGFGGGAMIGAPLANLLMNYFKTPTSVGVWETFVTMGVIYFVFMMIGAFAYRV CHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APVGWQPEGWTPPAVKKAMISEHHVHLDNAHKTPQFWLVWWVLCLNVSAGIGVIGMASPM CCCCCCCCCCCCHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCHHH LQEIFAGKLIGLPDVSFNQLDATQKATVAGIAAGFAGLLSLFNIGGRFFWASLSDHIGRK HHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHCCCH ATYYCFFLIGIVLYALAPTFAAMGSKLLFVGAFAIILSMYGGGFATVPAYLADLFGTQFV HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GAIHGRLLTAWATAGIIGPVVVNYIREFQLAAGVPRDQLYNTTMYILCAMLLAGLICNFM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IKPVDHKWNMSPEEVARYQAELAKSESAIQHGSFGIGKGGLDLSSALFWAFVGVPLAWGV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WKTLESAVKIF HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636101; 9651403; 11919184; 11113128; 11274108; 11500368 [H]