| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is treY [H]
Identifier: 146342653
GI number: 146342653
Start: 6034387
End: 6037191
Strand: Direct
Name: treY [H]
Synonym: BRADO5820
Alternate gene names: 146342653
Gene position: 6034387-6037191 (Clockwise)
Preceding gene: 146342652
Following gene: 146342655
Centisome position: 80.93
GC content: 65.95
Gene sequence:
>2805_bases ATGCCTCCCGCCATTCCGCTCGCGACCTATCGCCTGCAGCTCACCGCCGACTTCAACTTCGAGGCCGCGGCGCGCGTCGT GCCCTATCTCAAGGCGCTCGGCATCAGCCATGTCTACGCCTCGCCGTTCATGACGGCGCGCAAGGGCTCGACGCATGGCT ACGACATCACCGACCATGCCAAGCTCAATCCCGAGCTCGGCGGTGAGGAGGGCTTTGCCAAGCTCAGTGCCGCGCTGACA GCGCACGACCTCGGGCTGATCCTCGATTTCGTGCCCAACCATGTCGGCGTGCATTTCGACGACAATCCCTGGTGGCTGGA CGTGCTCGAATGGGGGCAGGCCTCGCCGCACGCGGCCTCGTTCGACATCGATTGGGATCAGCTGCCTTATCGCGCGCGCG GCGGCGTGCTGCTGCCGATCATCGGAACGTCCTACGGCCACGCGCTCGAACATGGCGACATCGAGCTGCGCTACGACGCG GAGGAAGGCTCCTTCTCCTGCTGGTACTTCGAGCACCGGCTGCCGGTCGCGCCCGAGCGATATGGCGAGATGCTGCGCAT CATACTCAAGGAGGCCGGCGAGGAGAACAGCGCGGATGGCAAGGCCATCCTGGACCTCGCTTCGCGCTACCGCGGCCTGC GTCATCCGAACCGCAAGGAGGCGCCCGCCTTCAAGGCTGCGCTGAAGGCCATTCCAGGTGCCGCCGACGTCATTGCTCGC GGTCTGCCCGCCTATCGGGCCGGCGAGGGCCGCCCGGCCCAGACGCTGGCCCTGCATCATCTGCTGGAGCGCCAGCACTA CAAGCTCGGGCACTGGCGGCTCGCCTCCAGCGACATCAACTATCGCCGCTTCTTCGACGTCAACACGCTGGCCGGCCTGC GCGTCGAGGATGCCGGCACGTTCGAGGCAATCCATCGGCTGGTCAAGAAGCTGATCGCCGACGGCCAGTTGCAGGGGCTG CGGCTCGACCATATCGACGGGCTGCGCGATCCCGCGCAATACTTCCAGCGCCTGCGGCGTCTCATTCGCGACGCGCGCGG ACCGGCCGTCGGTCCGTTCTACGTGGTCATCGAGAAGATTCTCTGCGAGCATGAGAAGCTGCCGAGCTTCGCCGGCGTGC ACGGCACCACCGGCTACGAGTGGATGAACGTGATCACGCAGCTCTTGATCGACGGCAAGGGGCTGGAGCCGCTCGACGAG ATCTGGCGGCAGATCAGCAACAAGCCGCCGAAGCTTGCGCCGGTCATCAAGGAGGCCAAGCGGCGCGTCCTCGAGACCTT GCTGACCTCCGAGTTCACCGTGTTGACGCGCCTGCTGGCGCGCATCGCCAACGGTCACTATTCCACGCGCGATTATTCCG AGGACAGTCTGCGCCAGGCGCTCGAGCTTTATGTGCTGCACTTCCCGGTCTATCGCACCTATCTCACCGGCGCCGGACCG ACCGAGGCCGACCGCAAGCTGATCGACCATGCCATCGCGGCTGCCCGCGCCGAGTGGTTCGCCTCCGACGGCTCGATCTT CGACTTCCTGCGCGACGCACTGACGATGGACCTCATCAAACGCGACCGCAACACGACTCACAGCGTTCCGCGCGTCCGCC GCTTCGCGTTGAAAGTGCAGCAGTTCACCGGACCGATGATGGCGAAATCGCTCGAGGACACCGGCTTCTACCGCTTCCAT CGGCTGCTCGCGCTCAACGAGGTCGGCGGTGATCCCTCCGCGCATGCGCTGGCGATCCGCGATTTCCACACGCTGATGCA GGCGCGGGCCAAGCATTGGCCGCACGGCATGACGGCGACCGCGACCCACGACACCAAGCGCGGCGAGGATGCCCGCACCC GCCTTGCGGCGCTGACCGAGATTCCCAACGATTGGACATCGGCGGTGGCGCGCTGGAAGACGATGAATGCACCGCATGTC GTCACCGACGGCAACATGCGGGCGCCCTCGGCGACCTTCGAATATATGCTCTATCAGACTCTCGTCGGCATCTGGCCTGC GAGCGGCGCCGATGAGTCGCTGGTCGAAAGACTCCAGGCCTATGCGCTGAAGGCCGCGCGTGAGGGCAAGGAGGAGACCA GCTGGCTCAATCCGAACGAGGCCTATGAAAATGGCTTGCGCACGTTCATCGAACGCATCCTGGACCGCGAGCGCTCGGCC GAGTTCCTGCAGTCGCTGGAGACCGTCGCCAAGCGGATCGCGCTGCTGGGCGCGTTGAACTCGCTGTCTCAGCTGACGCT CAAAGCGACGATGCCGGGCGTGCCCGATTTCTATCAGGGCACCGAGTTCTGGGATCTGTCGATGGTCGATCCCGACAACC GCCGCCCGGTCGATTTCGCTGCGCGCGAGCGGGCGCTGCGGGAGAACGAGTCGCCCGATTGGGCCGACCTCGCGGATCAT TGGCCCGATGGCCGCATCAAGCTCGCCTGGACGCACGAGTTGCTCAAGCTGCGCCAAGCGTTGCCATCGGTCTTCACCGA CGGCTCCTACGAGCCGCTGGAGGTGAGCGGGCGGCATGCCGGGCACATCATAGCCTTTGCGCGCCGTCGCGGCCGCGAGG CGGTCGTCATTGTGATCGCCCGCTCCCTGGCGCCTTTCGCCGACAGCGGCCGCGTCTGGCCGCACGCGGATGCATTCGAC GCGACCGTGCATCTTCCCGGCTATTCCGCGCCTCAGATCCAGAACGGCGCCCTCCCCGTCTCCGCGTTGTTCACTCATCT TCCCGCCGCGGTGCTCGCAGCCCGCGCGGAAAGTTCCCCCAGCCTCGGCACCAAGCAGACGCCTGTGCTGGCAACCCAGA GCTGA
Upstream 100 bases:
>100_bases CAGGCGCTTCGGCGAACACCGTCGGCACACCCATCTGGGGCGGCACGCCGGGCGATTGTCTGCCGCCCTGGTCCGTGTTC TGGAGCATCGGAGGATAGCC
Downstream 100 bases:
>100_bases TCAGTTCTTCTTGGTCAGCAGCAATTGTCCCCGGCTGCGGATGGCATTCTGCGCGGCCTCCGCAAAGCGCTGCAGCAACC AGGGCAGAGTGACCTCGACC
Product: putative glycosyl hydrolase (glycosidase)
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 934; Mature: 933
Protein sequence:
>934_residues MPPAIPLATYRLQLTADFNFEAAARVVPYLKALGISHVYASPFMTARKGSTHGYDITDHAKLNPELGGEEGFAKLSAALT AHDLGLILDFVPNHVGVHFDDNPWWLDVLEWGQASPHAASFDIDWDQLPYRARGGVLLPIIGTSYGHALEHGDIELRYDA EEGSFSCWYFEHRLPVAPERYGEMLRIILKEAGEENSADGKAILDLASRYRGLRHPNRKEAPAFKAALKAIPGAADVIAR GLPAYRAGEGRPAQTLALHHLLERQHYKLGHWRLASSDINYRRFFDVNTLAGLRVEDAGTFEAIHRLVKKLIADGQLQGL RLDHIDGLRDPAQYFQRLRRLIRDARGPAVGPFYVVIEKILCEHEKLPSFAGVHGTTGYEWMNVITQLLIDGKGLEPLDE IWRQISNKPPKLAPVIKEAKRRVLETLLTSEFTVLTRLLARIANGHYSTRDYSEDSLRQALELYVLHFPVYRTYLTGAGP TEADRKLIDHAIAAARAEWFASDGSIFDFLRDALTMDLIKRDRNTTHSVPRVRRFALKVQQFTGPMMAKSLEDTGFYRFH RLLALNEVGGDPSAHALAIRDFHTLMQARAKHWPHGMTATATHDTKRGEDARTRLAALTEIPNDWTSAVARWKTMNAPHV VTDGNMRAPSATFEYMLYQTLVGIWPASGADESLVERLQAYALKAAREGKEETSWLNPNEAYENGLRTFIERILDRERSA EFLQSLETVAKRIALLGALNSLSQLTLKATMPGVPDFYQGTEFWDLSMVDPDNRRPVDFAARERALRENESPDWADLADH WPDGRIKLAWTHELLKLRQALPSVFTDGSYEPLEVSGRHAGHIIAFARRRGREAVVIVIARSLAPFADSGRVWPHADAFD ATVHLPGYSAPQIQNGALPVSALFTHLPAAVLAARAESSPSLGTKQTPVLATQS
Sequences:
>Translated_934_residues MPPAIPLATYRLQLTADFNFEAAARVVPYLKALGISHVYASPFMTARKGSTHGYDITDHAKLNPELGGEEGFAKLSAALT AHDLGLILDFVPNHVGVHFDDNPWWLDVLEWGQASPHAASFDIDWDQLPYRARGGVLLPIIGTSYGHALEHGDIELRYDA EEGSFSCWYFEHRLPVAPERYGEMLRIILKEAGEENSADGKAILDLASRYRGLRHPNRKEAPAFKAALKAIPGAADVIAR GLPAYRAGEGRPAQTLALHHLLERQHYKLGHWRLASSDINYRRFFDVNTLAGLRVEDAGTFEAIHRLVKKLIADGQLQGL RLDHIDGLRDPAQYFQRLRRLIRDARGPAVGPFYVVIEKILCEHEKLPSFAGVHGTTGYEWMNVITQLLIDGKGLEPLDE IWRQISNKPPKLAPVIKEAKRRVLETLLTSEFTVLTRLLARIANGHYSTRDYSEDSLRQALELYVLHFPVYRTYLTGAGP TEADRKLIDHAIAAARAEWFASDGSIFDFLRDALTMDLIKRDRNTTHSVPRVRRFALKVQQFTGPMMAKSLEDTGFYRFH RLLALNEVGGDPSAHALAIRDFHTLMQARAKHWPHGMTATATHDTKRGEDARTRLAALTEIPNDWTSAVARWKTMNAPHV VTDGNMRAPSATFEYMLYQTLVGIWPASGADESLVERLQAYALKAAREGKEETSWLNPNEAYENGLRTFIERILDRERSA EFLQSLETVAKRIALLGALNSLSQLTLKATMPGVPDFYQGTEFWDLSMVDPDNRRPVDFAARERALRENESPDWADLADH WPDGRIKLAWTHELLKLRQALPSVFTDGSYEPLEVSGRHAGHIIAFARRRGREAVVIVIARSLAPFADSGRVWPHADAFD ATVHLPGYSAPQIQNGALPVSALFTHLPAAVLAARAESSPSLGTKQTPVLATQS >Mature_933_residues PPAIPLATYRLQLTADFNFEAAARVVPYLKALGISHVYASPFMTARKGSTHGYDITDHAKLNPELGGEEGFAKLSAALTA HDLGLILDFVPNHVGVHFDDNPWWLDVLEWGQASPHAASFDIDWDQLPYRARGGVLLPIIGTSYGHALEHGDIELRYDAE EGSFSCWYFEHRLPVAPERYGEMLRIILKEAGEENSADGKAILDLASRYRGLRHPNRKEAPAFKAALKAIPGAADVIARG LPAYRAGEGRPAQTLALHHLLERQHYKLGHWRLASSDINYRRFFDVNTLAGLRVEDAGTFEAIHRLVKKLIADGQLQGLR LDHIDGLRDPAQYFQRLRRLIRDARGPAVGPFYVVIEKILCEHEKLPSFAGVHGTTGYEWMNVITQLLIDGKGLEPLDEI WRQISNKPPKLAPVIKEAKRRVLETLLTSEFTVLTRLLARIANGHYSTRDYSEDSLRQALELYVLHFPVYRTYLTGAGPT EADRKLIDHAIAAARAEWFASDGSIFDFLRDALTMDLIKRDRNTTHSVPRVRRFALKVQQFTGPMMAKSLEDTGFYRFHR LLALNEVGGDPSAHALAIRDFHTLMQARAKHWPHGMTATATHDTKRGEDARTRLAALTEIPNDWTSAVARWKTMNAPHVV TDGNMRAPSATFEYMLYQTLVGIWPASGADESLVERLQAYALKAAREGKEETSWLNPNEAYENGLRTFIERILDRERSAE FLQSLETVAKRIALLGALNSLSQLTLKATMPGVPDFYQGTEFWDLSMVDPDNRRPVDFAARERALRENESPDWADLADHW PDGRIKLAWTHELLKLRQALPSVFTDGSYEPLEVSGRHAGHIIAFARRRGREAVVIVIARSLAPFADSGRVWPHADAFDA TVHLPGYSAPQIQNGALPVSALFTHLPAAVLAARAESSPSLGTKQTPVLATQS
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 104398; Mature: 104267
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAIPLATYRLQLTADFNFEAAARVVPYLKALGISHVYASPFMTARKGSTHGYDITDHA CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC KLNPELGGEEGFAKLSAALTAHDLGLILDFVPNHVGVHFDDNPWWLDVLEWGQASPHAAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHCCCCCCCCEE FDIDWDQLPYRARGGVLLPIIGTSYGHALEHGDIELRYDAEEGSFSCWYFEHRLPVAPER ECCCHHHCCCHHCCCEEEEEECCCCCCHHCCCCEEEEEECCCCCEEEEEEECCCCCCHHH YGEMLRIILKEAGEENSADGKAILDLASRYRGLRHPNRKEAPAFKAALKAIPGAADVIAR HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHC GLPAYRAGEGRPAQTLALHHLLERQHYKLGHWRLASSDINYRRFFDVNTLAGLRVEDAGT CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCHHCCCEECCCCH FEAIHRLVKKLIADGQLQGLRLDHIDGLRDPAQYFQRLRRLIRDARGPAVGPFYVVIEKI HHHHHHHHHHHHCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LCEHEKLPSFAGVHGTTGYEWMNVITQLLIDGKGLEPLDEIWRQISNKPPKLAPVIKEAK HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH RRVLETLLTSEFTVLTRLLARIANGHYSTRDYSEDSLRQALELYVLHFPVYRTYLTGAGP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC TEADRKLIDHAIAAARAEWFASDGSIFDFLRDALTMDLIKRDRNTTHSVPRVRRFALKVQ CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH QFTGPMMAKSLEDTGFYRFHRLLALNEVGGDPSAHALAIRDFHTLMQARAKHWPHGMTAT HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHCCCCCEEE ATHDTKRGEDARTRLAALTEIPNDWTSAVARWKTMNAPHVVTDGNMRAPSATFEYMLYQT CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHH LVGIWPASGADESLVERLQAYALKAAREGKEETSWLNPNEAYENGLRTFIERILDRERSA HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH EFLQSLETVAKRIALLGALNSLSQLTLKATMPGVPDFYQGTEFWDLSMVDPDNRRPVDFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHH ARERALRENESPDWADLADHWPDGRIKLAWTHELLKLRQALPSVFTDGSYEPLEVSGRHA HHHHHHHCCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC GHIIAFARRRGREAVVIVIARSLAPFADSGRVWPHADAFDATVHLPGYSAPQIQNGALPV CHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCH SALFTHLPAAVLAARAESSPSLGTKQTPVLATQS HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCC >Mature Secondary Structure PPAIPLATYRLQLTADFNFEAAARVVPYLKALGISHVYASPFMTARKGSTHGYDITDHA CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC KLNPELGGEEGFAKLSAALTAHDLGLILDFVPNHVGVHFDDNPWWLDVLEWGQASPHAAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHCCCCCCCCEE FDIDWDQLPYRARGGVLLPIIGTSYGHALEHGDIELRYDAEEGSFSCWYFEHRLPVAPER ECCCHHHCCCHHCCCEEEEEECCCCCCHHCCCCEEEEEECCCCCEEEEEEECCCCCCHHH YGEMLRIILKEAGEENSADGKAILDLASRYRGLRHPNRKEAPAFKAALKAIPGAADVIAR HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHC GLPAYRAGEGRPAQTLALHHLLERQHYKLGHWRLASSDINYRRFFDVNTLAGLRVEDAGT CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCHHCCCEECCCCH FEAIHRLVKKLIADGQLQGLRLDHIDGLRDPAQYFQRLRRLIRDARGPAVGPFYVVIEKI HHHHHHHHHHHHCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LCEHEKLPSFAGVHGTTGYEWMNVITQLLIDGKGLEPLDEIWRQISNKPPKLAPVIKEAK HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH RRVLETLLTSEFTVLTRLLARIANGHYSTRDYSEDSLRQALELYVLHFPVYRTYLTGAGP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC TEADRKLIDHAIAAARAEWFASDGSIFDFLRDALTMDLIKRDRNTTHSVPRVRRFALKVQ CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH QFTGPMMAKSLEDTGFYRFHRLLALNEVGGDPSAHALAIRDFHTLMQARAKHWPHGMTAT HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHCCCCCEEE ATHDTKRGEDARTRLAALTEIPNDWTSAVARWKTMNAPHVVTDGNMRAPSATFEYMLYQT CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHH LVGIWPASGADESLVERLQAYALKAAREGKEETSWLNPNEAYENGLRTFIERILDRERSA HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH EFLQSLETVAKRIALLGALNSLSQLTLKATMPGVPDFYQGTEFWDLSMVDPDNRRPVDFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHH ARERALRENESPDWADLADHWPDGRIKLAWTHELLKLRQALPSVFTDGSYEPLEVSGRHA HHHHHHHCCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC GHIIAFARRRGREAVVIVIARSLAPFADSGRVWPHADAFDATVHLPGYSAPQIQNGALPV CHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCH SALFTHLPAAVLAARAESSPSLGTKQTPVLATQS HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]