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The map label for this gene is glgB [H]

Identifier: 146342650

GI number: 146342650

Start: 6028403

End: 6030541

Strand: Direct

Name: glgB [H]

Synonym: BRADO5817

Alternate gene names: 146342650

Gene position: 6028403-6030541 (Clockwise)

Preceding gene: 146342649

Following gene: 146342651

Centisome position: 80.85

GC content: 63.67

Gene sequence:

>2139_bases
ATGACCCATCTTTCTCCCGAGGCGTTTGCGATCATCGAGGGCCGGCATGCCGACCCGTTTCGCTATCTCGGTCAGCACAA
CGTCGACGGCCAAACCATCGTGCGCGCCTTCCTGCCGGAGGCCTCCCGGGTCGAGGTGGTGGGCGAGCACGGCGAGGTCG
CGCCACTGGCGCGCATTCACGATGCTGGTCTGTTCACCGGGACGATGTCGTCGATGCAGCGCTATCGCTTGCGCGCGACC
TTCGGCGATTCCGTGACCGATCTGGAGGACCCCTATCGCTTCCTCCCGATCCTCGGGGATTTCGACCTGCACCTGCTCGG
GGAAGGCAATCATGAGCGGCTCTACGACAAGCTCGGTGCACATCCGATGGTCATCGACGGCGTCGATGGCGTCGGCTTCG
TGGTGCTCGCTCCCAATGCGCGGCGCGTCAGCGTGGTGGGCGATTTCAACTTCTGGAATGCAAGGCGGCATCCGATGCGG
GTGCGCGGCAACGGCTATTGGGAGCTGTTCATCCCGCGCGCCCGGGCTGGCGACCACTACAAGTTCGACATCATCGGTCC
GCAGGGCGAGCACCTGCCGCTGAAATCCGACCCGATGGCGTTCGCGGCCGAAATGCGCCCCAAGACGGCGTCGATCGTGG
TGGATGAGACGCGTCTGCCGCGGCCGCGCCCGGCGCCTCATGACATCAACAAGCTGAACAAGCCGGTCTCGATCTACGAG
GTGCATCTCGGCTCGTGGCGGCGCAAGGACAACAATCAGTGGCTGACCTATCGCGAACTGGCCGAGCAGCTGCCGGCCTA
TGCGCGCGACATGGGCTTCACCCATATCGAATTCCTGCCGATCAACGAGCATCCGTTCGACGGCAGCTGGGGCTATCAGC
CGACCGGCCTGTACGCGCCAACCAGCCGCTTCGGCAGCCCTGAGGACTTCTGTGCGCTGGTCGATGCCTGTCACCGCGAG
GGCCTTGCGGTGTGGCTCGACTGGGTGCCCGGCCATTTCCCGGATGATCCGCACGGGCTCGGCCATTTCGACGGCACCGC
GCTGTACGAGCATGCCAACCCGATGCAAGGCCGGCATCTCGACTGGGGCACGCTGATCTACAATTACGGCCGCACCGAAG
TGGCCAATTTCCTGCGCTCGAACGCGCTGTTCTGGCTGGAGCGCTACGGCATCGACGGCCTGCGCGTCGACGCCGTCGCC
TCGATGCTCTATCTCGACTACAGCCGTCCCTCGGGCGGCTGGATCCCCAACAAATATGGCGGACGCGAGAATCTCGAAGC
CATCGAGTTTCTGCGCCGGACCAACATCGACGTGTTCGGCCATTTCCCGCAGGCCACGACCGCGGCCGAAGAATCCACCG
CCTGGCCGCAAGTATCGCGTCCCGTCGACACGGGCGGGCTCGGCTTCGGCTACAAGTGGAACATGGGCTGGATGCACGAC
ACCTTGCGCTACGTCAGCAAGGACCCGATCCACCGCAAATATCACCACGGCGAGATCCTGTTCGGCCTGCACTACGCCTT
TTCGGAAAACTTCATCCTGCCGCTGTCGCATGACGAGGTCGTGCACGGCAAGCGCTCCATCCTGGGCCGCATGCCCGGGG
ACGACTGGCAGCGCTTCGCCAACCTGCGCGCCTATTACAGCTTCATGTTCGGCCATCCCGGCAAGAAGCTGCTGTTCATG
GGCTGCGAGCTCGCCCAGGAGCGGGAATGGAATCACGACACCTCGCTGGACTGGCATCTGCTGGGAGATGCGCGCTATGC
CGGCATCCAGGCCCTGATTCGCGACCTCAACCACCTCTACCGCAACCAGCCGGCGCTGCACGAGCGCGACTGCGATCCGG
AGGGCTTTGAGTGGCTGATCACCGACGATGCCGACCGCAACGTGTTCGCCTGGGTGCGAAAAGGCTTTGATGAGCGCGCC
CACTGCGTCGTGGTCGTGAACTTTTCCCCAAACGTGTATTACAATTACCGGGTCCGCGCGCCGCTCGGCGGCACATGGCG
GGAAGTCTTCAATTCGGACTCCTCGCATTATGGCGGCAGCAATGTCGGCAATGTCGGCCAGGTCCATGCCTCTGAAGATC
AGCACCTCAACCTCATCCTCCCGCCCATGGCAGCGGTATTTCTCGTCCCGGAAGCCTGA

Upstream 100 bases:

>100_bases
CGCTCGAATATGATCTGGCTCACCGGCCGGACTGGTTGCGCGTCGCGCTGGGCAATCTGCTTCGCGTCCTGTCCGAGTCA
GCCCCTTCCAGCGAGTCTTC

Downstream 100 bases:

>100_bases
CGCGATGCGCCTGGCCGCAGGAAGTCACGCCCGCCTCGGTGCCACCTGGGACGGGCGAGGGACCAACTTTGCCCTGTTCT
CCGCCAATGCCGAGAAGGTC

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 712; Mature: 711

Protein sequence:

>712_residues
MTHLSPEAFAIIEGRHADPFRYLGQHNVDGQTIVRAFLPEASRVEVVGEHGEVAPLARIHDAGLFTGTMSSMQRYRLRAT
FGDSVTDLEDPYRFLPILGDFDLHLLGEGNHERLYDKLGAHPMVIDGVDGVGFVVLAPNARRVSVVGDFNFWNARRHPMR
VRGNGYWELFIPRARAGDHYKFDIIGPQGEHLPLKSDPMAFAAEMRPKTASIVVDETRLPRPRPAPHDINKLNKPVSIYE
VHLGSWRRKDNNQWLTYRELAEQLPAYARDMGFTHIEFLPINEHPFDGSWGYQPTGLYAPTSRFGSPEDFCALVDACHRE
GLAVWLDWVPGHFPDDPHGLGHFDGTALYEHANPMQGRHLDWGTLIYNYGRTEVANFLRSNALFWLERYGIDGLRVDAVA
SMLYLDYSRPSGGWIPNKYGGRENLEAIEFLRRTNIDVFGHFPQATTAAEESTAWPQVSRPVDTGGLGFGYKWNMGWMHD
TLRYVSKDPIHRKYHHGEILFGLHYAFSENFILPLSHDEVVHGKRSILGRMPGDDWQRFANLRAYYSFMFGHPGKKLLFM
GCELAQEREWNHDTSLDWHLLGDARYAGIQALIRDLNHLYRNQPALHERDCDPEGFEWLITDDADRNVFAWVRKGFDERA
HCVVVVNFSPNVYYNYRVRAPLGGTWREVFNSDSSHYGGSNVGNVGQVHASEDQHLNLILPPMAAVFLVPEA

Sequences:

>Translated_712_residues
MTHLSPEAFAIIEGRHADPFRYLGQHNVDGQTIVRAFLPEASRVEVVGEHGEVAPLARIHDAGLFTGTMSSMQRYRLRAT
FGDSVTDLEDPYRFLPILGDFDLHLLGEGNHERLYDKLGAHPMVIDGVDGVGFVVLAPNARRVSVVGDFNFWNARRHPMR
VRGNGYWELFIPRARAGDHYKFDIIGPQGEHLPLKSDPMAFAAEMRPKTASIVVDETRLPRPRPAPHDINKLNKPVSIYE
VHLGSWRRKDNNQWLTYRELAEQLPAYARDMGFTHIEFLPINEHPFDGSWGYQPTGLYAPTSRFGSPEDFCALVDACHRE
GLAVWLDWVPGHFPDDPHGLGHFDGTALYEHANPMQGRHLDWGTLIYNYGRTEVANFLRSNALFWLERYGIDGLRVDAVA
SMLYLDYSRPSGGWIPNKYGGRENLEAIEFLRRTNIDVFGHFPQATTAAEESTAWPQVSRPVDTGGLGFGYKWNMGWMHD
TLRYVSKDPIHRKYHHGEILFGLHYAFSENFILPLSHDEVVHGKRSILGRMPGDDWQRFANLRAYYSFMFGHPGKKLLFM
GCELAQEREWNHDTSLDWHLLGDARYAGIQALIRDLNHLYRNQPALHERDCDPEGFEWLITDDADRNVFAWVRKGFDERA
HCVVVVNFSPNVYYNYRVRAPLGGTWREVFNSDSSHYGGSNVGNVGQVHASEDQHLNLILPPMAAVFLVPEA
>Mature_711_residues
THLSPEAFAIIEGRHADPFRYLGQHNVDGQTIVRAFLPEASRVEVVGEHGEVAPLARIHDAGLFTGTMSSMQRYRLRATF
GDSVTDLEDPYRFLPILGDFDLHLLGEGNHERLYDKLGAHPMVIDGVDGVGFVVLAPNARRVSVVGDFNFWNARRHPMRV
RGNGYWELFIPRARAGDHYKFDIIGPQGEHLPLKSDPMAFAAEMRPKTASIVVDETRLPRPRPAPHDINKLNKPVSIYEV
HLGSWRRKDNNQWLTYRELAEQLPAYARDMGFTHIEFLPINEHPFDGSWGYQPTGLYAPTSRFGSPEDFCALVDACHREG
LAVWLDWVPGHFPDDPHGLGHFDGTALYEHANPMQGRHLDWGTLIYNYGRTEVANFLRSNALFWLERYGIDGLRVDAVAS
MLYLDYSRPSGGWIPNKYGGRENLEAIEFLRRTNIDVFGHFPQATTAAEESTAWPQVSRPVDTGGLGFGYKWNMGWMHDT
LRYVSKDPIHRKYHHGEILFGLHYAFSENFILPLSHDEVVHGKRSILGRMPGDDWQRFANLRAYYSFMFGHPGKKLLFMG
CELAQEREWNHDTSLDWHLLGDARYAGIQALIRDLNHLYRNQPALHERDCDPEGFEWLITDDADRNVFAWVRKGFDERAH
CVVVVNFSPNVYYNYRVRAPLGGTWREVFNSDSSHYGGSNVGNVGQVHASEDQHLNLILPPMAAVFLVPEA

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=651, Percent_Identity=27.1889400921659, Blast_Score=171, Evalue=3e-42,
Organism=Escherichia coli, GI1789839, Length=718, Percent_Identity=57.1030640668524, Blast_Score=791, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=635, Percent_Identity=26.7716535433071, Blast_Score=165, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI32564391, Length=521, Percent_Identity=28.0230326295585, Blast_Score=149, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6320826, Length=645, Percent_Identity=26.5116279069767, Blast_Score=158, Evalue=3e-39,
Organism=Drosophila melanogaster, GI28573410, Length=612, Percent_Identity=27.9411764705882, Blast_Score=166, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 81179; Mature: 81048

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLSPEAFAIIEGRHADPFRYLGQHNVDGQTIVRAFLPEASRVEVVGEHGEVAPLARIH
CCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
DAGLFTGTMSSMQRYRLRATFGDSVTDLEDPYRFLPILGDFDLHLLGEGNHERLYDKLGA
CCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHCC
HPMVIDGVDGVGFVVLAPNARRVSVVGDFNFWNARRHPMRVRGNGYWELFIPRARAGDHY
CCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCCCCCCE
KFDIIGPQGEHLPLKSDPMAFAAEMRPKTASIVVDETRLPRPRPAPHDINKLNKPVSIYE
EEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCEEEEE
VHLGSWRRKDNNQWLTYRELAEQLPAYARDMGFTHIEFLPINEHPFDGSWGYQPTGLYAP
EECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
TSRFGSPEDFCALVDACHREGLAVWLDWVPGHFPDDPHGLGHFDGTALYEHANPMQGRHL
HHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
DWGTLIYNYGRTEVANFLRSNALFWLERYGIDGLRVDAVASMLYLDYSRPSGGWIPNKYG
CHHHEEEECCHHHHHHHHHCCCEEEEHHCCCCCEEHHHHHHHHEEECCCCCCCCCCCCCC
GRENLEAIEFLRRTNIDVFGHFPQATTAAEESTAWPQVSRPVDTGGLGFGYKWNMGWMHD
CCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHH
TLRYVSKDPIHRKYHHGEILFGLHYAFSENFILPLSHDEVVHGKRSILGRMPGDDWQRFA
HHHHHCCCCCHHHCCCCCEEEEEEEECCCCEEEECCCCHHHCCHHHHHCCCCCHHHHHHH
NLRAYYSFMFGHPGKKLLFMGCELAQEREWNHDTSLDWHLLGDARYAGIQALIRDLNHLY
HHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
RNQPALHERDCDPEGFEWLITDDADRNVFAWVRKGFDERAHCVVVVNFSPNVYYNYRVRA
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEC
PLGGTWREVFNSDSSHYGGSNVGNVGQVHASEDQHLNLILPPMAAVFLVPEA
CCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCEEEEEECCC
>Mature Secondary Structure 
THLSPEAFAIIEGRHADPFRYLGQHNVDGQTIVRAFLPEASRVEVVGEHGEVAPLARIH
CCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
DAGLFTGTMSSMQRYRLRATFGDSVTDLEDPYRFLPILGDFDLHLLGEGNHERLYDKLGA
CCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHCC
HPMVIDGVDGVGFVVLAPNARRVSVVGDFNFWNARRHPMRVRGNGYWELFIPRARAGDHY
CCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCCCCCCE
KFDIIGPQGEHLPLKSDPMAFAAEMRPKTASIVVDETRLPRPRPAPHDINKLNKPVSIYE
EEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCEEEEE
VHLGSWRRKDNNQWLTYRELAEQLPAYARDMGFTHIEFLPINEHPFDGSWGYQPTGLYAP
EECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
TSRFGSPEDFCALVDACHREGLAVWLDWVPGHFPDDPHGLGHFDGTALYEHANPMQGRHL
HHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
DWGTLIYNYGRTEVANFLRSNALFWLERYGIDGLRVDAVASMLYLDYSRPSGGWIPNKYG
CHHHEEEECCHHHHHHHHHCCCEEEEHHCCCCCEEHHHHHHHHEEECCCCCCCCCCCCCC
GRENLEAIEFLRRTNIDVFGHFPQATTAAEESTAWPQVSRPVDTGGLGFGYKWNMGWMHD
CCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHH
TLRYVSKDPIHRKYHHGEILFGLHYAFSENFILPLSHDEVVHGKRSILGRMPGDDWQRFA
HHHHHCCCCCHHHCCCCCEEEEEEEECCCCEEEECCCCHHHCCHHHHHCCCCCHHHHHHH
NLRAYYSFMFGHPGKKLLFMGCELAQEREWNHDTSLDWHLLGDARYAGIQALIRDLNHLY
HHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
RNQPALHERDCDPEGFEWLITDDADRNVFAWVRKGFDERAHCVVVVNFSPNVYYNYRVRA
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEC
PLGGTWREVFNSDSSHYGGSNVGNVGQVHASEDQHLNLILPPMAAVFLVPEA
CCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA