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The map label for this gene is pqqB [H]

Identifier: 146342629

GI number: 146342629

Start: 5994960

End: 5995889

Strand: Direct

Name: pqqB [H]

Synonym: BRADO5794

Alternate gene names: 146342629

Gene position: 5994960-5995889 (Clockwise)

Preceding gene: 146342628

Following gene: 146342630

Centisome position: 80.4

GC content: 65.59

Gene sequence:

>930_bases
ATGCTTCGCCTCGTCGTCCTGGGCGCCGCCGCGGGCGGCGGAGTCCCGCAGTGGAATTGCGGCTGCGCCGTCTGCCGCGC
CGCGCGCACCTCGCATCCCGAGATCTGCAACAGCCAGGCTTCGGTCGCCGTCAGTGCCGATGGCGCGAACTGGTTCCTGA
TCAACGCCTCGCCCGACCTGCGCCAGCAGGTGACGCGCGCACCGCAGCTGCATCCGAAGCCGGGCGCGCTGCGGCACAGC
CCGATCGCCGGCGTGATCCTGACCAATGGCGAGATCGACGCCATCACCGGCCTGCTCTCGATGCGCGAAAGCTCGCCTTT
TTCGATCCATGCGCACCCCAAGGTGCTTGCGATCCTCCGCTCCAACAACATTTTCGACGTGCTGAAGGAGGAGAACGTCA
AGCGCGTGCCGATCGTGATCGACGTGCCGTTCCGCCCGCAGCTGCAGGACGGCGGGCCATCCGGGCTGGAGATCACGGCC
TTCGCGGTGTCCGGCACCAGCGCGTGGTATCTGCGCGACAAGCAGCATCCGGGCGGCAGCTCCTCGACCGGAGACACGCT
CGGCTTGAAGATCGAGGATGTCGACAGCGGGCAATATGCCTATGTCATCGCCGCCTGCGCCGGCGTCGACCATGAGCTGA
AAACGAGATTGAAAGGCGCGCCGCTGGTGCTGTTCGACGGCACGGTGTGGCGCGACGACGAGATGATCCAAGCCGGACTC
GGCAACAAGACCGGGCAGAGCATGGGCCATATCGCGATGTCCGGAGAGAGCGGCGCGATCAAGCAGCTGTCGGACCTCGG
GATCGGCAGGAAGATCTTCCTGCACATCAACAACTCCAATCCGGCGTGGCTGCACGCCTCACCCGAGCGGCAAACGTTGG
AACGCGAGGGATGGGAAATCCCCGCTGAAGGGATGGAGATCGTGCTGTGA

Upstream 100 bases:

>100_bases
CCCTCGTCGCCCTCCTGACCCGCCGATGCACGGACATCGCTGGTCATTCTGCCGCCGGTAATCGCGTGCGCCACTACAGC
TGAATTCCAGGAGACGGCTC

Downstream 100 bases:

>100_bases
GTGAGGTCAATCTGAGCGGGATGACGGCGCTGTCGATCGGACGCGGCGTCACGTTGAACAATGCGAGCGAATTGGAAGCG
GCGCTGCGCCACATCGGCGC

Product: pyrroloquinoline quinone biosynthesis protein PqqB

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein B [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLRLVVLGAAAGGGVPQWNCGCAVCRAARTSHPEICNSQASVAVSADGANWFLINASPDLRQQVTRAPQLHPKPGALRHS
PIAGVILTNGEIDAITGLLSMRESSPFSIHAHPKVLAILRSNNIFDVLKEENVKRVPIVIDVPFRPQLQDGGPSGLEITA
FAVSGTSAWYLRDKQHPGGSSSTGDTLGLKIEDVDSGQYAYVIAACAGVDHELKTRLKGAPLVLFDGTVWRDDEMIQAGL
GNKTGQSMGHIAMSGESGAIKQLSDLGIGRKIFLHINNSNPAWLHASPERQTLEREGWEIPAEGMEIVL

Sequences:

>Translated_309_residues
MLRLVVLGAAAGGGVPQWNCGCAVCRAARTSHPEICNSQASVAVSADGANWFLINASPDLRQQVTRAPQLHPKPGALRHS
PIAGVILTNGEIDAITGLLSMRESSPFSIHAHPKVLAILRSNNIFDVLKEENVKRVPIVIDVPFRPQLQDGGPSGLEITA
FAVSGTSAWYLRDKQHPGGSSSTGDTLGLKIEDVDSGQYAYVIAACAGVDHELKTRLKGAPLVLFDGTVWRDDEMIQAGL
GNKTGQSMGHIAMSGESGAIKQLSDLGIGRKIFLHINNSNPAWLHASPERQTLEREGWEIPAEGMEIVL
>Mature_309_residues
MLRLVVLGAAAGGGVPQWNCGCAVCRAARTSHPEICNSQASVAVSADGANWFLINASPDLRQQVTRAPQLHPKPGALRHS
PIAGVILTNGEIDAITGLLSMRESSPFSIHAHPKVLAILRSNNIFDVLKEENVKRVPIVIDVPFRPQLQDGGPSGLEITA
FAVSGTSAWYLRDKQHPGGSSSTGDTLGLKIEDVDSGQYAYVIAACAGVDHELKTRLKGAPLVLFDGTVWRDDEMIQAGL
GNKTGQSMGHIAMSGESGAIKQLSDLGIGRKIFLHINNSNPAWLHASPERQTLEREGWEIPAEGMEIVL

Specific function: May be involved in the transport of PQQ or its precursor to the periplasm, in association with PQQ biosynthesis, but is not absolutely required for this synthesis [H]

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011842 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32999; Mature: 32999

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLVVLGAAAGGGVPQWNCGCAVCRAARTSHPEICNSQASVAVSADGANWFLINASPDL
CEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCEEEEEECCCEEEEEECCCHH
RQQVTRAPQLHPKPGALRHSPIAGVILTNGEIDAITGLLSMRESSPFSIHAHPKVLAILR
HHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCEEEEEEE
SNNIFDVLKEENVKRVPIVIDVPFRPQLQDGGPSGLEITAFAVSGTSAWYLRDKQHPGGS
CCCEEEHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCCC
SSTGDTLGLKIEDVDSGQYAYVIAACAGVDHELKTRLKGAPLVLFDGTVWRDDEMIQAGL
CCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHCCCCEEEECCEEECCCHHHHHCC
GNKTGQSMGHIAMSGESGAIKQLSDLGIGRKIFLHINNSNPAWLHASPERQTLEREGWEI
CCCCCCCCCEEEECCCCCCHHHHHHCCCCEEEEEEECCCCCEEEECCCCHHHHHHCCCCC
PAEGMEIVL
CCCCEEEEC
>Mature Secondary Structure
MLRLVVLGAAAGGGVPQWNCGCAVCRAARTSHPEICNSQASVAVSADGANWFLINASPDL
CEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCEEEEEECCCEEEEEECCCHH
RQQVTRAPQLHPKPGALRHSPIAGVILTNGEIDAITGLLSMRESSPFSIHAHPKVLAILR
HHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCEEEEEEE
SNNIFDVLKEENVKRVPIVIDVPFRPQLQDGGPSGLEITAFAVSGTSAWYLRDKQHPGGS
CCCEEEHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCCC
SSTGDTLGLKIEDVDSGQYAYVIAACAGVDHELKTRLKGAPLVLFDGTVWRDDEMIQAGL
CCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHCCCCEEEECCEEECCCHHHHHCC
GNKTGQSMGHIAMSGESGAIKQLSDLGIGRKIFLHINNSNPAWLHASPERQTLEREGWEI
CCCCCCCCCEEEECCCCCCHHHHHHCCCCEEEEEEECCCCCEEEECCCCHHHHHHCCCCC
PAEGMEIVL
CCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA